RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 SMC5Q8IY18 1101 aa7.07□□□□□ -1.28
VPS36-202ENST00000462289 PLD4Q96BZ4 506 aa7.07□□□□□ -1.28
VPS36-202ENST00000462289 EAF2Q96CJ1 260 aaPredicted RBP7.07□□□□□ -1.28
VPS36-202ENST00000462289 SIL1Q9H173 461 aa7.07□□□□□ -1.28
VPS36-202ENST00000462289 TAF1DQ9H5J8 278 aaPredicted RBP7.07□□□□□ -1.28
VPS36-202ENST00000462289 NMRK2Q9NPI5 230 aa7.07□□□□□ -1.28
VPS36-202ENST00000462289 CXXC1Q9P0U4 656 aaPredicted RBP7.07□□□□□ -1.28
VPS36-202ENST00000462289 DBNLQ9UJU6 430 aaKnown RBP7.07□□□□□ -1.28
VPS36-202ENST00000462289 AKAP2Q9Y2D5 859 aa7.07□□□□□ -1.28
VPS36-202ENST00000462289 SUGT1Q9Y2Z0 365 aa7.07□□□□□ -1.28
VPS36-202ENST00000462289 FPGT-TNNI3KV9GXZ4 949 aa7.07□□□□□ -1.28
VPS36-202ENST00000462289 CEP350Q5VT06 3117 aa7.07□□□□□ -1.28
VPS36-202ENST00000462289 DDX60LQ5H9U9 1706 aaKnown RBP7.07□□□□□ -1.28
VPS36-202ENST00000462289 IQCA1LA6NCM1 817 aa7.06□□□□□ -1.28
VPS36-202ENST00000462289 J3QW42 95 aa7.06□□□□□ -1.28
VPS36-202ENST00000462289 TNFRSF10BO14763 440 aa7.06□□□□□ -1.28
VPS36-202ENST00000462289 SURF6O75683 361 aaKnown RBP7.06□□□□□ -1.28
VPS36-202ENST00000462289 IFIT1P09914 478 aaKnown RBP7.06□□□□□ -1.28
VPS36-202ENST00000462289 SLC5A1P13866 664 aa7.06□□□□□ -1.28
VPS36-202ENST00000462289 ADORA1P30542 326 aa7.06□□□□□ -1.28
VPS36-202ENST00000462289 PHKA1P46020 1223 aa7.06□□□□□ -1.28
VPS36-202ENST00000462289 GYG1P46976 350 aa7.06□□□□□ -1.28
VPS36-202ENST00000462289 IREB2P48200 963 aaKnown RBP7.06□□□□□ -1.28
VPS36-202ENST00000462289 HDLBPQ00341 1268 aaKnown RBP7.06□□□□□ -1.28
VPS36-202ENST00000462289 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.06□□□□□ -1.28
VPS36-202ENST00000462289 KIF1BPQ96EK5 621 aa7.06□□□□□ -1.28
VPS36-202ENST00000462289 SRA1Q9HD15 236 aaKnown RBP7.06□□□□□ -1.28
VPS36-202ENST00000462289 ZFP64Q9NPA5 681 aa7.06□□□□□ -1.28
VPS36-202ENST00000462289 RFX7Q2KHR2 1363 aa7.06□□□□□ -1.28
VPS36-202ENST00000462289 PASKQ96RG2 1323 aa7.05□□□□□ -1.28
VPS36-202ENST00000462289 SCO2A0A1W2PP80 73 aa7.05□□□□□ -1.28
VPS36-202ENST00000462289 RAD17O75943 681 aa7.05□□□□□ -1.28
VPS36-202ENST00000462289 GHRHP01286 108 aa7.05□□□□□ -1.28
VPS36-202ENST00000462289 EPS15P42566 896 aa7.05□□□□□ -1.28
VPS36-202ENST00000462289 GMPSP49915 693 aaPredicted RBP7.05□□□□□ -1.28
VPS36-202ENST00000462289 TIMM10P62072 90 aa7.05□□□□□ -1.28
VPS36-202ENST00000462289 G3BP1Q13283 466 aaKnown RBP eCLIP7.05□□□□□ -1.28
VPS36-202ENST00000462289 RASGRF1Q13972 1273 aa7.05□□□□□ -1.28
VPS36-202ENST00000462289 TTLL5Q6EMB2 1281 aa7.05□□□□□ -1.28
VPS36-202ENST00000462289 USP50Q70EL3 339 aaPredicted RBP7.05□□□□□ -1.28
VPS36-202ENST00000462289 TMEM130Q8N3G9 435 aa7.05□□□□□ -1.28
VPS36-202ENST00000462289 EXOC6Q8TAG9 804 aa7.05□□□□□ -1.28
VPS36-202ENST00000462289 ZNF384Q8TF68 577 aa7.05□□□□□ -1.28
VPS36-202ENST00000462289 NSUN5Q96P11 429 aaKnown RBP7.05□□□□□ -1.28
VPS36-202ENST00000462289 PSMG3-AS1Q96PY0 264 aa7.05□□□□□ -1.28
VPS36-202ENST00000462289 ADARB2Q9NS39 739 aaKnown RBP7.05□□□□□ -1.28
VPS36-202ENST00000462289 HACL1Q9UJ83 578 aa7.05□□□□□ -1.28
VPS36-202ENST00000462289 EXOC6BQ9Y2D4 811 aa7.05□□□□□ -1.28
VPS36-202ENST00000462289 THSD7BQ9C0I4 1608 aa7.05□□□□□ -1.28
VPS36-202ENST00000462289 GAKO14976 1311 aa7.04□□□□□ -1.28
VPS36-202ENST00000462289 PITPNM2Q9BZ72 1349 aa7.04□□□□□ -1.28
VPS36-202ENST00000462289 SIPA1L1O43166 1804 aa7.04□□□□□ -1.28
VPS36-202ENST00000462289 PCNTO95613 3336 aa7.04□□□□□ -1.28
VPS36-202ENST00000462289 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.04□□□□□ -1.28
VPS36-202ENST00000462289 SHTN1A0MZ66 631 aa7.04□□□□□ -1.28
VPS36-202ENST00000462289 TOMM70O94826 608 aa7.04□□□□□ -1.28
VPS36-202ENST00000462289 EPHX2P34913 555 aa7.04□□□□□ -1.28
VPS36-202ENST00000462289 MCAMP43121 646 aa7.04□□□□□ -1.28
VPS36-202ENST00000462289 KCNJ4P48050 445 aa7.04□□□□□ -1.28
VPS36-202ENST00000462289 FSTL1Q12841 308 aa7.04□□□□□ -1.28
VPS36-202ENST00000462289 CAVIN4Q5BKX8 364 aa7.04□□□□□ -1.28
VPS36-202ENST00000462289 TMED8Q6PL24 325 aaPredicted RBP7.04□□□□□ -1.28
VPS36-202ENST00000462289 CAPN12Q6ZSI9 719 aa7.04□□□□□ -1.28
VPS36-202ENST00000462289 PNMA8AQ86V59 439 aaPredicted RBP7.04□□□□□ -1.28
VPS36-202ENST00000462289 LDHDQ86WU2 507 aa7.04□□□□□ -1.28
VPS36-202ENST00000462289 MAP4K3Q8IVH8 894 aa7.04□□□□□ -1.28
VPS36-202ENST00000462289 CACTIN-AS1Q8N1I8 211 aa7.04□□□□□ -1.28
VPS36-202ENST00000462289 TBC1D22AQ8WUA7 517 aa7.04□□□□□ -1.28
VPS36-202ENST00000462289 CLP1Q92989 425 aaKnown RBP7.04□□□□□ -1.28
VPS36-202ENST00000462289 MEGF10Q96KG7 1140 aa7.04□□□□□ -1.28
VPS36-202ENST00000462289 DBNDD2Q9BQY9 259 aa7.04□□□□□ -1.28
VPS36-202ENST00000462289 RBSNQ9H1K0 784 aa7.04□□□□□ -1.28
VPS36-202ENST00000462289 FAM13BQ9NYF5 915 aa7.04□□□□□ -1.28
VPS36-202ENST00000462289 CNOT7Q9UIV1 285 aaKnown RBP7.04□□□□□ -1.28
VPS36-202ENST00000462289 AK9Q5TCS8 1911 aa7.03□□□□□ -1.28
VPS36-202ENST00000462289 OTOFQ9HC10 1997 aa7.03□□□□□ -1.28
VPS36-202ENST00000462289 UQCRFS1P1P0C7P4 283 aa7.03□□□□□ -1.28
VPS36-202ENST00000462289 LRP8Q14114 963 aa7.03□□□□□ -1.28
VPS36-202ENST00000462289 MFSD14BQ5SR56 506 aa7.03□□□□□ -1.28
VPS36-202ENST00000462289 TMEM164Q5U3C3 297 aa7.03□□□□□ -1.28
VPS36-202ENST00000462289 OR13H1Q8NG92 308 aa7.03□□□□□ -1.28
VPS36-202ENST00000462289 WDR66Q8TBY9 1149 aa7.03□□□□□ -1.28
VPS36-202ENST00000462289 GCC1Q96CN9 775 aa7.03□□□□□ -1.28
VPS36-202ENST00000462289 MXD3Q9BW11 206 aa7.03□□□□□ -1.28
VPS36-202ENST00000462289 MRPL18Q9H0U6 180 aaKnown RBP7.03□□□□□ -1.28
VPS36-202ENST00000462289 HMG20BQ9P0W2 317 aa7.03□□□□□ -1.28
VPS36-202ENST00000462289 STAP2Q9UGK3 403 aa7.03□□□□□ -1.28
VPS36-202ENST00000462289 SERPINA10Q9UK55 444 aa7.03□□□□□ -1.28
VPS36-202ENST00000462289 DENND2AQ9ULE3 1009 aa7.03□□□□□ -1.28
VPS36-202ENST00000462289 COL2A1P02458 1487 aaPredicted RBP7.03□□□□□ -1.28
VPS36-202ENST00000462289 WNT10BO00744 389 aa7.02□□□□□ -1.29
VPS36-202ENST00000462289 IGHDP01880 384 aa7.02□□□□□ -1.29
VPS36-202ENST00000462289 ATP5JP18859 108 aa7.02□□□□□ -1.29
VPS36-202ENST00000462289 SETDB1Q15047 1291 aa7.02□□□□□ -1.29
VPS36-202ENST00000462289 FKBP1CQ5VVH2 108 aa7.02□□□□□ -1.29
VPS36-202ENST00000462289 GDF6Q6KF10 455 aaPredicted RBP7.02□□□□□ -1.29
VPS36-202ENST00000462289 HHIPL2Q6UWX4 724 aa7.02□□□□□ -1.29
VPS36-202ENST00000462289 Q6ZS46 218 aa7.02□□□□□ -1.29
VPS36-202ENST00000462289 CLASRPQ8N2M8 674 aaKnown RBP7.02□□□□□ -1.29
VPS36-202ENST00000462289 IL22RA1Q8N6P7 574 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms