RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 MORC2Q9Y6X9 1032 aaPredicted RBP12.47□□□□□ -0.41
DDR1-240ENST00000454612 GLI3P10071 1580 aa12.47□□□□□ -0.41
DDR1-240ENST00000454612 GOLGA6L9A6NEM1 432 aa12.47□□□□□ -0.41
DDR1-240ENST00000454612 BMP15O95972 392 aa12.47□□□□□ -0.41
DDR1-240ENST00000454612 PLCG1P19174 1290 aa12.47□□□□□ -0.41
DDR1-240ENST00000454612 SV2BQ7L1I2 683 aa12.47□□□□□ -0.41
DDR1-240ENST00000454612 KRT26Q7Z3Y9 468 aa12.47□□□□□ -0.41
DDR1-240ENST00000454612 REXO1Q8N1G1 1221 aaKnown RBP12.47□□□□□ -0.41
DDR1-240ENST00000454612 NAPGQ99747 312 aaPredicted RBP12.47□□□□□ -0.41
DDR1-240ENST00000454612 EIF3JO75822 258 aaKnown RBP12.46□□□□□ -0.41
DDR1-240ENST00000454612 KLK7P49862 253 aa12.46□□□□□ -0.41
DDR1-240ENST00000454612 GNAQP50148 359 aa12.46□□□□□ -0.41
DDR1-240ENST00000454612 ST5P78524 1137 aa12.46□□□□□ -0.41
DDR1-240ENST00000454612 ENOX1Q8TC92 643 aaKnown RBP12.46□□□□□ -0.41
DDR1-240ENST00000454612 CEP89Q96ST8 783 aa12.46□□□□□ -0.41
DDR1-240ENST00000454612 USP40Q9NVE5 1235 aa12.46□□□□□ -0.41
DDR1-240ENST00000454612 USP17L5A8MUK1 530 aa12.46□□□□□ -0.41
DDR1-240ENST00000454612 ATP2C2O75185 946 aa12.46□□□□□ -0.41
DDR1-240ENST00000454612 AMPD3Q01432 767 aa12.46□□□□□ -0.41
DDR1-240ENST00000454612 ZSCAN26Q16670 478 aa12.46□□□□□ -0.41
DDR1-240ENST00000454612 RAD9BQ6WBX8 426 aa12.46□□□□□ -0.41
DDR1-240ENST00000454612 ADAT2Q7Z6V5 191 aaKnown RBP12.46□□□□□ -0.41
DDR1-240ENST00000454612 CNPY4Q8N129 248 aa12.46□□□□□ -0.41
DDR1-240ENST00000454612 OSBPL5Q9H0X9 879 aaPredicted RBP12.46□□□□□ -0.41
DDR1-240ENST00000454612 EPN1Q9Y6I3 576 aaPredicted RBP12.46□□□□□ -0.41
DDR1-240ENST00000454612 PSDA5PKW4 1024 aaPredicted RBP12.46□□□□□ -0.42
DDR1-240ENST00000454612 USO1O60763 962 aaKnown RBP12.46□□□□□ -0.42
DDR1-240ENST00000454612 GNA11P29992 359 aa12.46□□□□□ -0.42
DDR1-240ENST00000454612 SPAG1Q07617 926 aa12.46□□□□□ -0.42
DDR1-240ENST00000454612 CALCRLQ16602 461 aa12.46□□□□□ -0.42
DDR1-240ENST00000454612 ODF2Q5BJF6 829 aa12.46□□□□□ -0.42
DDR1-240ENST00000454612 JAKMIP2Q96AA8 810 aa12.46□□□□□ -0.42
DDR1-240ENST00000454612 NSUN4Q96CB9 384 aaKnown RBP12.46□□□□□ -0.42
DDR1-240ENST00000454612 MAP3K14Q99558 947 aa12.46□□□□□ -0.42
DDR1-240ENST00000454612 TMEM47Q9BQJ4 181 aa12.46□□□□□ -0.42
DDR1-240ENST00000454612 BSDC1Q9NW68 430 aaPredicted RBP12.46□□□□□ -0.42
DDR1-240ENST00000454612 DOT1LQ8TEK3 1739 aa12.46□□□□□ -0.42
DDR1-240ENST00000454612 STX10O60499 249 aa12.45□□□□□ -0.42
DDR1-240ENST00000454612 GDF11O95390 407 aa12.45□□□□□ -0.42
DDR1-240ENST00000454612 CYLC1P35663 651 aaPredicted RBP12.45□□□□□ -0.42
DDR1-240ENST00000454612 GRIK5Q16478 980 aa12.45□□□□□ -0.42
DDR1-240ENST00000454612 PROCA1Q8NCQ7 364 aaPredicted RBP12.45□□□□□ -0.42
DDR1-240ENST00000454612 WDR66Q8TBY9 1149 aa12.45□□□□□ -0.42
DDR1-240ENST00000454612 TSG101Q99816 390 aa12.45□□□□□ -0.42
DDR1-240ENST00000454612 PRPF3O43395 683 aaKnown RBP12.45□□□□□ -0.42
DDR1-240ENST00000454612 NTSR2O95665 410 aa12.45□□□□□ -0.42
DDR1-240ENST00000454612 CYP26C1Q6V0L0 522 aa12.45□□□□□ -0.42
DDR1-240ENST00000454612 SLC30A10Q6XR72 485 aa12.45□□□□□ -0.42
DDR1-240ENST00000454612 KSR1Q8IVT5 923 aa12.45□□□□□ -0.42
DDR1-240ENST00000454612 TUBGCP2Q9BSJ2 902 aa12.45□□□□□ -0.42
DDR1-240ENST00000454612 TRIM31Q9BZY9 425 aa12.45□□□□□ -0.42
DDR1-240ENST00000454612 KCPQ6ZWJ8 1503 aa12.45□□□□□ -0.42
DDR1-240ENST00000454612 TCRBV5S4A2TA0A5A2 114 aa12.45□□□□□ -0.42
DDR1-240ENST00000454612 SFI1A8K8P3 1242 aa12.45□□□□□ -0.42
DDR1-240ENST00000454612 PNMA6AP0CW24 399 aaPredicted RBP12.45□□□□□ -0.42
DDR1-240ENST00000454612 TAL1P17542 331 aaPredicted RBP12.45□□□□□ -0.42
DDR1-240ENST00000454612 GSTO1P78417 241 aa12.45□□□□□ -0.42
DDR1-240ENST00000454612 POTEAQ6S8J7 498 aa12.45□□□□□ -0.42
DDR1-240ENST00000454612 RAB34Q9BZG1 259 aa12.45□□□□□ -0.42
DDR1-240ENST00000454612 SMARCAL1Q9NZC9 954 aa12.45□□□□□ -0.42
DDR1-240ENST00000454612 CDHR2Q9BYE9 1310 aa12.45□□□□□ -0.42
DDR1-240ENST00000454612 SMIM23A6NLE4 172 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 KRT86O43790 486 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 ZEB2O60315 1214 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 ABL1P00519 1130 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 MYCNP04198 464 aaPredicted RBP12.44□□□□□ -0.42
DDR1-240ENST00000454612 PAFAH1B1P43034 410 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 SLC7A5Q01650 507 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 TXNRD1Q16881 649 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 TC2NQ8N9U0 490 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 OR8K1Q8NGG5 319 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 USP17L15C9J2P7 530 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 USP17L13C9JLJ4 530 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 USP17L11C9JVI0 530 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 USP17L18D6R9N7 530 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 USP17L22D6RA61 530 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 USP17L17D6RBQ6 530 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 USP17L19D6RCP7 530 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 USP17L20D6RJB6 530 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 KIAA0754O94854 1291 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 USP17L24Q0WX57 530 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 USP17L6PQ6QN14 398 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 HOMER2Q9NSB8 354 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 ARPP21Q9UBL0 812 aaPredicted RBP12.44□□□□□ -0.42
DDR1-240ENST00000454612 TMEM110-MUSTN1A8MSY1 372 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 ADAMTS3O15072 1205 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 SLC1A4P43007 532 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 TTBK2Q6IQ55 1244 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 TICAM2Q86XR7 235 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 CCDC113Q9H0I3 377 aa12.44□□□□□ -0.42
DDR1-240ENST00000454612 GTPBP6O43824 516 aaPredicted RBP12.43□□□□□ -0.42
DDR1-240ENST00000454612 HLA-DOAP06340 250 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 CDK8P49336 464 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 DNAAF5Q86Y56 855 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 CEP95Q96GE4 821 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 CNOT6LQ96LI5 555 aaKnown RBP12.43□□□□□ -0.42
DDR1-240ENST00000454612 GOPCQ9HD26 462 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 TTC26A0AVF1 554 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 CFBP00751 764 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 TROAPQ12815 778 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms