RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 PDE6BP35913 854 aa5.38□□□□□ -1.55
SPG11-206ENST00000558093 ETFBP38117 255 aa5.38□□□□□ -1.55
SPG11-206ENST00000558093 GALK1P51570 392 aa5.38□□□□□ -1.55
SPG11-206ENST00000558093 RTP1P59025 263 aa5.38□□□□□ -1.55
SPG11-206ENST00000558093 AMPD2Q01433 879 aa5.38□□□□□ -1.55
SPG11-206ENST00000558093 SNX17Q15036 470 aa5.38□□□□□ -1.55
SPG11-206ENST00000558093 PKN1Q16512 942 aa5.38□□□□□ -1.55
SPG11-206ENST00000558093 FXNQ16595 210 aa5.38□□□□□ -1.55
SPG11-206ENST00000558093 NAALADL2Q58DX5 795 aa5.38□□□□□ -1.55
SPG11-206ENST00000558093 C6orf15Q6UXA7 325 aaPredicted RBP5.38□□□□□ -1.55
SPG11-206ENST00000558093 PRR23BQ6ZRT6 265 aa5.38□□□□□ -1.55
SPG11-206ENST00000558093 KSR1Q8IVT5 923 aa5.38□□□□□ -1.55
SPG11-206ENST00000558093 SLC38A3Q99624 504 aa5.38□□□□□ -1.55
SPG11-206ENST00000558093 SLC12A9Q9BXP2 914 aa5.38□□□□□ -1.55
SPG11-206ENST00000558093 EPB41L4BQ9H329 900 aa5.38□□□□□ -1.55
SPG11-206ENST00000558093 CGGBP1Q9UFW8 167 aaPredicted RBP5.38□□□□□ -1.55
SPG11-206ENST00000558093 ZNF281Q9Y2X9 895 aa5.38□□□□□ -1.55
SPG11-206ENST00000558093 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.37□□□□□ -1.55
SPG11-206ENST00000558093 STXBP3O00186 592 aa5.37□□□□□ -1.55
SPG11-206ENST00000558093 NOP56O00567 594 aaKnown RBP5.37□□□□□ -1.55
SPG11-206ENST00000558093 NRDCO43847 1150 aa5.37□□□□□ -1.55
SPG11-206ENST00000558093 IFNGR1P15260 489 aa5.37□□□□□ -1.55
SPG11-206ENST00000558093 DPY19L1Q2PZI1 675 aa5.37□□□□□ -1.55
SPG11-206ENST00000558093 RTP2Q5QGT7 225 aa5.37□□□□□ -1.55
SPG11-206ENST00000558093 ZNF648Q5T619 568 aaPredicted RBP5.37□□□□□ -1.55
SPG11-206ENST00000558093 GALNT18Q6P9A2 607 aa5.37□□□□□ -1.55
SPG11-206ENST00000558093 CYP2R1Q6VVX0 501 aa5.37□□□□□ -1.55
SPG11-206ENST00000558093 JAMLQ86YT9 394 aa5.37□□□□□ -1.55
SPG11-206ENST00000558093 SIRT2Q8IXJ6 389 aa5.37□□□□□ -1.55
SPG11-206ENST00000558093 INTS4Q96HW7 963 aaKnown RBP5.37□□□□□ -1.55
SPG11-206ENST00000558093 APBA2Q99767 749 aa5.37□□□□□ -1.55
SPG11-206ENST00000558093 KRTAP4-8Q9BYQ9 185 aa5.37□□□□□ -1.55
SPG11-206ENST00000558093 DCP1AQ9NPI6 582 aaPredicted RBP5.37□□□□□ -1.55
SPG11-206ENST00000558093 PPP1R1BQ9UD71 204 aaPredicted RBP5.37□□□□□ -1.55
SPG11-206ENST00000558093 YBX2Q9Y2T7 364 aaKnown RBP5.37□□□□□ -1.55
SPG11-206ENST00000558093 WTIPA6NIX2 430 aaPredicted RBP5.36□□□□□ -1.55
SPG11-206ENST00000558093 FADS2P1A8MWK0 482 aa5.36□□□□□ -1.55
SPG11-206ENST00000558093 B2RBV5 119 aa5.36□□□□□ -1.55
SPG11-206ENST00000558093 ZNF143P52747 638 aaPredicted RBP5.36□□□□□ -1.55
SPG11-206ENST00000558093 HSF5Q4G112 596 aaPredicted RBP5.36□□□□□ -1.55
SPG11-206ENST00000558093 ADGRF1Q5T601 910 aa5.36□□□□□ -1.55
SPG11-206ENST00000558093 HLA-DQA1Q5Y7H0 255 aa5.36□□□□□ -1.55
SPG11-206ENST00000558093 POMZP3Q6PJE2 187 aa5.36□□□□□ -1.55
SPG11-206ENST00000558093 IRF2BP1Q8IU81 584 aa5.36□□□□□ -1.55
SPG11-206ENST00000558093 FAM178BQ8IXR5 827 aa5.36□□□□□ -1.55
SPG11-206ENST00000558093 POU5F2Q8N7G0 328 aa5.36□□□□□ -1.55
SPG11-206ENST00000558093 NUP43Q8NFH3 380 aa5.36□□□□□ -1.55
SPG11-206ENST00000558093 HNRNPLLQ8WVV9 542 aaKnown RBP5.36□□□□□ -1.55
SPG11-206ENST00000558093 SP110Q9HB58 689 aa5.36□□□□□ -1.55
SPG11-206ENST00000558093 LRP2BPQ9P2M1 347 aa5.36□□□□□ -1.55
SPG11-206ENST00000558093 APEX2Q9UBZ4 518 aa5.36□□□□□ -1.55
SPG11-206ENST00000558093 AKT3Q9Y243 479 aa5.36□□□□□ -1.55
SPG11-206ENST00000558093 A0A1W2PQ45 241 aaPredicted RBP5.35□□□□□ -1.55
SPG11-206ENST00000558093 A0A1W2PQY0 241 aa5.35□□□□□ -1.55
SPG11-206ENST00000558093 VAMP4O75379 141 aa5.35□□□□□ -1.55
SPG11-206ENST00000558093 STK10O94804 968 aaKnown RBP5.35□□□□□ -1.55
SPG11-206ENST00000558093 KCNH1O95259 989 aa5.35□□□□□ -1.55
SPG11-206ENST00000558093 TBC1D8O95759 1140 aa5.35□□□□□ -1.55
SPG11-206ENST00000558093 ARL4AP40617 200 aa5.35□□□□□ -1.55
SPG11-206ENST00000558093 SEPHS1P49903 392 aa5.35□□□□□ -1.55
SPG11-206ENST00000558093 GRB10Q13322 594 aa5.35□□□□□ -1.55
SPG11-206ENST00000558093 SV2CQ496J9 727 aa5.35□□□□□ -1.55
SPG11-206ENST00000558093 ANKS3Q6ZW76 656 aa5.35□□□□□ -1.55
SPG11-206ENST00000558093 ZNF605Q86T29 641 aa5.35□□□□□ -1.55
SPG11-206ENST00000558093 SLCO6A1Q86UG4 719 aa5.35□□□□□ -1.55
SPG11-206ENST00000558093 NLRX1Q86UT6 975 aa5.35□□□□□ -1.55
SPG11-206ENST00000558093 FBXO15Q8NCQ5 510 aaPredicted RBP5.35□□□□□ -1.55
SPG11-206ENST00000558093 RCC1LQ96I51 464 aaKnown RBP5.35□□□□□ -1.55
SPG11-206ENST00000558093 FAM84AQ96KN4 292 aa5.35□□□□□ -1.55
SPG11-206ENST00000558093 FCRL3Q96P31 734 aaPredicted RBP5.35□□□□□ -1.55
SPG11-206ENST00000558093 GMLQ99445 158 aa5.35□□□□□ -1.55
SPG11-206ENST00000558093 TANGO6Q9C0B7 1094 aa5.35□□□□□ -1.55
SPG11-206ENST00000558093 BACE2Q9Y5Z0 518 aa5.35□□□□□ -1.55
SPG11-206ENST00000558093 A0A1W2PQJ5 194 aa5.34□□□□□ -1.55
SPG11-206ENST00000558093 OR14I1A6ND48 311 aa5.34□□□□□ -1.55
SPG11-206ENST00000558093 AURKAO14965 403 aa5.34□□□□□ -1.55
SPG11-206ENST00000558093 FGF10O15520 208 aaPredicted RBP5.34□□□□□ -1.55
SPG11-206ENST00000558093 PRKCAP17252 672 aa5.34□□□□□ -1.55
SPG11-206ENST00000558093 LAPTM5Q13571 262 aa5.34□□□□□ -1.55
SPG11-206ENST00000558093 EEF1DP3Q658K8 133 aa5.34□□□□□ -1.55
SPG11-206ENST00000558093 ARHGEF39Q8N4T4 335 aa5.34□□□□□ -1.55
SPG11-206ENST00000558093 BVESQ8NE79 360 aa5.34□□□□□ -1.55
SPG11-206ENST00000558093 PTCHD1Q96NR3 888 aa5.34□□□□□ -1.55
SPG11-206ENST00000558093 JMJD8Q96S16 334 aa5.34□□□□□ -1.55
SPG11-206ENST00000558093 PPP1R16BQ96T49 567 aa5.34□□□□□ -1.55
SPG11-206ENST00000558093 PLCD4Q9BRC7 762 aa5.34□□□□□ -1.55
SPG11-206ENST00000558093 TRIM55Q9BYV6 548 aa5.34□□□□□ -1.55
SPG11-206ENST00000558093 CRTAC1Q9NQ79 661 aa5.34□□□□□ -1.55
SPG11-206ENST00000558093 IMPACTQ9P2X3 320 aa5.34□□□□□ -1.55
SPG11-206ENST00000558093 SUSD2Q9UGT4 822 aa5.34□□□□□ -1.55
SPG11-206ENST00000558093 NOTOA8MTQ0 251 aa5.33□□□□□ -1.56
SPG11-206ENST00000558093 AGRPO00253 132 aa5.33□□□□□ -1.56
SPG11-206ENST00000558093 U2SURPO15042 1029 aaKnown RBP5.33□□□□□ -1.56
SPG11-206ENST00000558093 SUSD5O60279 629 aa5.33□□□□□ -1.56
SPG11-206ENST00000558093 PNLIPP16233 465 aa5.33□□□□□ -1.56
SPG11-206ENST00000558093 ATP2B1P20020 1258 aa5.33□□□□□ -1.56
SPG11-206ENST00000558093 RCSD1Q6JBY9 416 aa5.33□□□□□ -1.56
SPG11-206ENST00000558093 SYDE1Q6ZW31 735 aaPredicted RBP5.33□□□□□ -1.56
SPG11-206ENST00000558093 EEPD1Q7L9B9 569 aa5.33□□□□□ -1.56
SPG11-206ENST00000558093 CKAP2LQ8IYA6 745 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms