RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 SUGT1Q9Y2Z0 365 aa9.64□□□□□ -0.87
YBX3-210ENST00000540975 VAMP4O75379 141 aa9.63□□□□□ -0.87
YBX3-210ENST00000540975 TXKP42681 527 aa9.63□□□□□ -0.87
YBX3-210ENST00000540975 CEBPAP49715 358 aaPredicted RBP9.63□□□□□ -0.87
YBX3-210ENST00000540975 ZNF143P52747 638 aaPredicted RBP9.63□□□□□ -0.87
YBX3-210ENST00000540975 CEP128Q6ZU80 1094 aa9.63□□□□□ -0.87
YBX3-210ENST00000540975 SHISA4Q96DD7 197 aa9.63□□□□□ -0.87
YBX3-210ENST00000540975 APEX2Q9UBZ4 518 aa9.63□□□□□ -0.87
YBX3-210ENST00000540975 CGGBP1Q9UFW8 167 aaPredicted RBP9.63□□□□□ -0.87
YBX3-210ENST00000540975 R3HCC1Q9Y3T6 440 aaKnown RBP9.63□□□□□ -0.87
YBX3-210ENST00000540975 NRDCO43847 1150 aa9.62□□□□□ -0.87
YBX3-210ENST00000540975 RTP1P59025 263 aa9.62□□□□□ -0.87
YBX3-210ENST00000540975 MPZL3Q6UWV2 235 aa9.62□□□□□ -0.87
YBX3-210ENST00000540975 HNRNPLLQ8WVV9 542 aaKnown RBP9.62□□□□□ -0.87
YBX3-210ENST00000540975 AKT3Q9Y243 479 aa9.62□□□□□ -0.87
YBX3-210ENST00000540975 LRRC10BA6NIK2 292 aa9.61□□□□□ -0.87
YBX3-210ENST00000540975 B2RBV5 119 aa9.61□□□□□ -0.87
YBX3-210ENST00000540975 KLF4O43474 513 aa9.61□□□□□ -0.87
YBX3-210ENST00000540975 EFEMP2O95967 443 aa9.61□□□□□ -0.87
YBX3-210ENST00000540975 CD3EP07766 207 aa9.61□□□□□ -0.87
YBX3-210ENST00000540975 NAT2P11245 290 aa9.61□□□□□ -0.87
YBX3-210ENST00000540975 IFNGR1P15260 489 aa9.61□□□□□ -0.87
YBX3-210ENST00000540975 MLANAQ16655 118 aa9.61□□□□□ -0.87
YBX3-210ENST00000540975 OGFOD2Q6N063 350 aa9.61□□□□□ -0.87
YBX3-210ENST00000540975 MCMBPQ9BTE3 642 aa9.61□□□□□ -0.87
YBX3-210ENST00000540975 CWC22Q9HCG8 908 aaKnown RBP9.61□□□□□ -0.87
YBX3-210ENST00000540975 GPR160Q9UJ42 338 aa9.61□□□□□ -0.87
YBX3-210ENST00000540975 FGF10O15520 208 aaPredicted RBP9.6□□□□□ -0.87
YBX3-210ENST00000540975 GJB6O95452 261 aa9.6□□□□□ -0.87
YBX3-210ENST00000540975 DPY19L1Q2PZI1 675 aa9.6□□□□□ -0.87
YBX3-210ENST00000540975 PRR23BQ6ZRT6 265 aa9.6□□□□□ -0.87
YBX3-210ENST00000540975 NLRX1Q86UT6 975 aa9.6□□□□□ -0.87
YBX3-210ENST00000540975 BVESQ8NE79 360 aa9.6□□□□□ -0.87
YBX3-210ENST00000540975 TANGO6Q9C0B7 1094 aa9.6□□□□□ -0.87
YBX3-210ENST00000540975 ST7Q9NRC1 585 aa9.6□□□□□ -0.87
YBX3-210ENST00000540975 GPR55Q9Y2T6 319 aaPredicted RBP9.6□□□□□ -0.87
YBX3-210ENST00000540975 YBX2Q9Y2T7 364 aaKnown RBP9.6□□□□□ -0.87
YBX3-210ENST00000540975 EMC9Q9Y3B6 208 aa9.6□□□□□ -0.87
YBX3-210ENST00000540975 A0A1W2PQ45 241 aaPredicted RBP9.59□□□□□ -0.87
YBX3-210ENST00000540975 A0A1W2PQY0 241 aa9.59□□□□□ -0.87
YBX3-210ENST00000540975 AURKAO14965 403 aa9.59□□□□□ -0.87
YBX3-210ENST00000540975 ATP2B1P20020 1258 aa9.59□□□□□ -0.87
YBX3-210ENST00000540975 GALK1P51570 392 aa9.59□□□□□ -0.87
YBX3-210ENST00000540975 GRB10Q13322 594 aa9.59□□□□□ -0.87
YBX3-210ENST00000540975 HLA-DQA1Q5Y7H0 255 aa9.59□□□□□ -0.87
YBX3-210ENST00000540975 MRM1Q6IN84 353 aaKnown RBP9.59□□□□□ -0.87
YBX3-210ENST00000540975 SLCO6A1Q86UG4 719 aa9.59□□□□□ -0.87
YBX3-210ENST00000540975 SIRT2Q8IXJ6 389 aa9.59□□□□□ -0.87
YBX3-210ENST00000540975 CELF2-AS1Q8N7Q2 184 aa9.59□□□□□ -0.87
YBX3-210ENST00000540975 WTIPA6NIX2 430 aaPredicted RBP9.58□□□□□ -0.88
YBX3-210ENST00000540975 NOP56O00567 594 aaKnown RBP9.58□□□□□ -0.88
YBX3-210ENST00000540975 AMPD2Q01433 879 aa9.58□□□□□ -0.88
YBX3-210ENST00000540975 HSF5Q4G112 596 aaPredicted RBP9.58□□□□□ -0.88
YBX3-210ENST00000540975 GALNT18Q6P9A2 607 aa9.58□□□□□ -0.88
YBX3-210ENST00000540975 POU5F2Q8N7G0 328 aa9.58□□□□□ -0.88
YBX3-210ENST00000540975 NAT16Q8N8M0 369 aa9.58□□□□□ -0.88
YBX3-210ENST00000540975 PTCHD1Q96NR3 888 aa9.58□□□□□ -0.88
YBX3-210ENST00000540975 PLCD4Q9BRC7 762 aa9.58□□□□□ -0.88
YBX3-210ENST00000540975 SUSD5O60279 629 aa9.57□□□□□ -0.88
YBX3-210ENST00000540975 STK10O94804 968 aaKnown RBP9.57□□□□□ -0.88
YBX3-210ENST00000540975 KCNH1O95259 989 aa9.57□□□□□ -0.88
YBX3-210ENST00000540975 KIR3DS1Q14943 382 aa9.57□□□□□ -0.88
YBX3-210ENST00000540975 SV2CQ496J9 727 aa9.57□□□□□ -0.88
YBX3-210ENST00000540975 POMZP3Q6PJE2 187 aa9.57□□□□□ -0.88
YBX3-210ENST00000540975 PPP1R14AQ96A00 147 aa9.57□□□□□ -0.88
YBX3-210ENST00000540975 MRGPRX3Q96LB0 322 aa9.57□□□□□ -0.88
YBX3-210ENST00000540975 LGR4Q9BXB1 951 aa9.57□□□□□ -0.88
YBX3-210ENST00000540975 CRTAC1Q9NQ79 661 aa9.57□□□□□ -0.88
YBX3-210ENST00000540975 C2orf71A6NGG8 1288 aa9.56□□□□□ -0.88
YBX3-210ENST00000540975 EEF1DP3Q658K8 133 aa9.56□□□□□ -0.88
YBX3-210ENST00000540975 RCSD1Q6JBY9 416 aa9.56□□□□□ -0.88
YBX3-210ENST00000540975 CYP2R1Q6VVX0 501 aa9.56□□□□□ -0.88
YBX3-210ENST00000540975 INTS4Q96HW7 963 aaKnown RBP9.56□□□□□ -0.88
YBX3-210ENST00000540975 JMJD8Q96S16 334 aa9.56□□□□□ -0.88
YBX3-210ENST00000540975 DIRC2Q96SL1 478 aa9.56□□□□□ -0.88
YBX3-210ENST00000540975 SLC6A17Q9H1V8 727 aa9.56□□□□□ -0.88
YBX3-210ENST00000540975 STXBP3O00186 592 aa9.55□□□□□ -0.88
YBX3-210ENST00000540975 FARP2O94887 1054 aaPredicted RBP9.55□□□□□ -0.88
YBX3-210ENST00000540975 TBC1D8O95759 1140 aa9.55□□□□□ -0.88
YBX3-210ENST00000540975 MESP2Q0VG99 397 aa9.55□□□□□ -0.88
YBX3-210ENST00000540975 RAB33AQ14088 237 aa9.55□□□□□ -0.88
YBX3-210ENST00000540975 DDR2Q16832 855 aa9.55□□□□□ -0.88
YBX3-210ENST00000540975 TRIM59Q8IWR1 403 aa9.55□□□□□ -0.88
YBX3-210ENST00000540975 CRACR2BQ8N4Y2 399 aaPredicted RBP9.55□□□□□ -0.88
YBX3-210ENST00000540975 NSUN3Q9H649 340 aaKnown RBP9.55□□□□□ -0.88
YBX3-210ENST00000540975 KCNK12Q9HB15 430 aa9.55□□□□□ -0.88
YBX3-210ENST00000540975 BACE2Q9Y5Z0 518 aa9.55□□□□□ -0.88
YBX3-210ENST00000540975 ITGAVP06756 1048 aa9.54□□□□□ -0.88
YBX3-210ENST00000540975 PNLIPP16233 465 aa9.54□□□□□ -0.88
YBX3-210ENST00000540975 SEPHS1P49903 392 aa9.54□□□□□ -0.88
YBX3-210ENST00000540975 EEPD1Q7L9B9 569 aa9.54□□□□□ -0.88
YBX3-210ENST00000540975 NPM2Q86SE8 214 aaKnown RBP9.54□□□□□ -0.88
YBX3-210ENST00000540975 JAMLQ86YT9 394 aa9.54□□□□□ -0.88
YBX3-210ENST00000540975 IRF2BP1Q8IU81 584 aa9.54□□□□□ -0.88
YBX3-210ENST00000540975 CKAP2LQ8IYA6 745 aa9.54□□□□□ -0.88
YBX3-210ENST00000540975 LRP2BPQ9P2M1 347 aa9.54□□□□□ -0.88
YBX3-210ENST00000540975 PPP1R1BQ9UD71 204 aaPredicted RBP9.54□□□□□ -0.88
YBX3-210ENST00000540975 ACSL6Q9UKU0 697 aa9.54□□□□□ -0.88
YBX3-210ENST00000540975 TAF6LQ9Y6J9 622 aa9.54□□□□□ -0.88
YBX3-210ENST00000540975 PRKCAP17252 672 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms