RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 FAM53CQ9NYF3 392 aa6.36□□□□□ -1.39
ATPAF1-211ENST00000534216 TNFRSF10DQ9UBN6 386 aa6.36□□□□□ -1.39
ATPAF1-211ENST00000534216 FADS2P1A8MWK0 482 aa6.35□□□□□ -1.39
ATPAF1-211ENST00000534216 PSPNO60542 156 aa6.35□□□□□ -1.39
ATPAF1-211ENST00000534216 TXKP42681 527 aa6.35□□□□□ -1.39
ATPAF1-211ENST00000534216 NOP2P46087 812 aaKnown RBP6.35□□□□□ -1.39
ATPAF1-211ENST00000534216 CEBPAP49715 358 aaPredicted RBP6.35□□□□□ -1.39
ATPAF1-211ENST00000534216 ZNF143P52747 638 aaPredicted RBP6.35□□□□□ -1.39
ATPAF1-211ENST00000534216 POU4F1Q01851 419 aa6.35□□□□□ -1.39
ATPAF1-211ENST00000534216 SNX17Q15036 470 aa6.35□□□□□ -1.39
ATPAF1-211ENST00000534216 MPZL3Q6UWV2 235 aa6.35□□□□□ -1.39
ATPAF1-211ENST00000534216 CEP128Q6ZU80 1094 aa6.35□□□□□ -1.39
ATPAF1-211ENST00000534216 FAM178BQ8IXR5 827 aa6.35□□□□□ -1.39
ATPAF1-211ENST00000534216 ARHGEF39Q8N4T4 335 aa6.35□□□□□ -1.39
ATPAF1-211ENST00000534216 MICAL1Q8TDZ2 1067 aa6.35□□□□□ -1.39
ATPAF1-211ENST00000534216 C8orf37Q96NL8 207 aa6.35□□□□□ -1.39
ATPAF1-211ENST00000534216 FCRL3Q96P31 734 aaPredicted RBP6.35□□□□□ -1.39
ATPAF1-211ENST00000534216 APEX2Q9UBZ4 518 aa6.35□□□□□ -1.39
ATPAF1-211ENST00000534216 CGGBP1Q9UFW8 167 aaPredicted RBP6.35□□□□□ -1.39
ATPAF1-211ENST00000534216 LRRC10BA6NIK2 292 aa6.34□□□□□ -1.39
ATPAF1-211ENST00000534216 B2RBV5 119 aa6.34□□□□□ -1.39
ATPAF1-211ENST00000534216 NRDCO43847 1150 aa6.34□□□□□ -1.39
ATPAF1-211ENST00000534216 EFEMP2O95967 443 aa6.34□□□□□ -1.39
ATPAF1-211ENST00000534216 CD3EP07766 207 aa6.34□□□□□ -1.39
ATPAF1-211ENST00000534216 SLC14A2Q15849 920 aa6.34□□□□□ -1.39
ATPAF1-211ENST00000534216 FXNQ16595 210 aa6.34□□□□□ -1.39
ATPAF1-211ENST00000534216 ANKS3Q6ZW76 656 aa6.34□□□□□ -1.39
ATPAF1-211ENST00000534216 TMEM52Q8NDY8 209 aa6.34□□□□□ -1.39
ATPAF1-211ENST00000534216 SHISA4Q96DD7 197 aa6.34□□□□□ -1.39
ATPAF1-211ENST00000534216 APBA2Q99767 749 aa6.34□□□□□ -1.39
ATPAF1-211ENST00000534216 GPR160Q9UJ42 338 aa6.34□□□□□ -1.39
ATPAF1-211ENST00000534216 GPR55Q9Y2T6 319 aaPredicted RBP6.34□□□□□ -1.39
ATPAF1-211ENST00000534216 SUGT1Q9Y2Z0 365 aa6.34□□□□□ -1.39
ATPAF1-211ENST00000534216 FGF10O15520 208 aaPredicted RBP6.33□□□□□ -1.4
ATPAF1-211ENST00000534216 DDAH1O94760 285 aa6.33□□□□□ -1.4
ATPAF1-211ENST00000534216 NAT2P11245 290 aa6.33□□□□□ -1.4
ATPAF1-211ENST00000534216 IFNGR1P15260 489 aa6.33□□□□□ -1.4
ATPAF1-211ENST00000534216 RTP1P59025 263 aa6.33□□□□□ -1.4
ATPAF1-211ENST00000534216 MLANAQ16655 118 aa6.33□□□□□ -1.4
ATPAF1-211ENST00000534216 PRR23BQ6ZRT6 265 aa6.33□□□□□ -1.4
ATPAF1-211ENST00000534216 NLRX1Q86UT6 975 aa6.33□□□□□ -1.4
ATPAF1-211ENST00000534216 POU5F2Q8N7G0 328 aa6.33□□□□□ -1.4
ATPAF1-211ENST00000534216 HNRNPLLQ8WVV9 542 aaKnown RBP6.33□□□□□ -1.4
ATPAF1-211ENST00000534216 CWC22Q9HCG8 908 aaKnown RBP6.33□□□□□ -1.4
ATPAF1-211ENST00000534216 YBX2Q9Y2T7 364 aaKnown RBP6.33□□□□□ -1.4
ATPAF1-211ENST00000534216 KLF4O43474 513 aa6.32□□□□□ -1.4
ATPAF1-211ENST00000534216 VAMP4O75379 141 aa6.32□□□□□ -1.4
ATPAF1-211ENST00000534216 GRB10Q13322 594 aa6.32□□□□□ -1.4
ATPAF1-211ENST00000534216 HSF5Q4G112 596 aaPredicted RBP6.32□□□□□ -1.4
ATPAF1-211ENST00000534216 MRM1Q6IN84 353 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-211ENST00000534216 SLCO6A1Q86UG4 719 aa6.32□□□□□ -1.4
ATPAF1-211ENST00000534216 NAT16Q8N8M0 369 aa6.32□□□□□ -1.4
ATPAF1-211ENST00000534216 PLCD4Q9BRC7 762 aa6.32□□□□□ -1.4
ATPAF1-211ENST00000534216 MCMBPQ9BTE3 642 aa6.32□□□□□ -1.4
ATPAF1-211ENST00000534216 AKT3Q9Y243 479 aa6.32□□□□□ -1.4
ATPAF1-211ENST00000534216 EMC9Q9Y3B6 208 aa6.32□□□□□ -1.4
ATPAF1-211ENST00000534216 R3HCC1Q9Y3T6 440 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-211ENST00000534216 A0A1W2PQ45 241 aaPredicted RBP6.31□□□□□ -1.4
ATPAF1-211ENST00000534216 A0A1W2PQY0 241 aa6.31□□□□□ -1.4
ATPAF1-211ENST00000534216 WTIPA6NIX2 430 aaPredicted RBP6.31□□□□□ -1.4
ATPAF1-211ENST00000534216 STXBP3O00186 592 aa6.31□□□□□ -1.4
ATPAF1-211ENST00000534216 AURKAO14965 403 aa6.31□□□□□ -1.4
ATPAF1-211ENST00000534216 GALK1P51570 392 aa6.31□□□□□ -1.4
ATPAF1-211ENST00000534216 AMPD2Q01433 879 aa6.31□□□□□ -1.4
ATPAF1-211ENST00000534216 DPY19L1Q2PZI1 675 aa6.31□□□□□ -1.4
ATPAF1-211ENST00000534216 RCSD1Q6JBY9 416 aa6.31□□□□□ -1.4
ATPAF1-211ENST00000534216 GALNT18Q6P9A2 607 aa6.31□□□□□ -1.4
ATPAF1-211ENST00000534216 CYP2R1Q6VVX0 501 aa6.31□□□□□ -1.4
ATPAF1-211ENST00000534216 CELF2-AS1Q8N7Q2 184 aa6.31□□□□□ -1.4
ATPAF1-211ENST00000534216 BVESQ8NE79 360 aa6.31□□□□□ -1.4
ATPAF1-211ENST00000534216 INTS4Q96HW7 963 aaKnown RBP6.31□□□□□ -1.4
ATPAF1-211ENST00000534216 PTCHD1Q96NR3 888 aa6.31□□□□□ -1.4
ATPAF1-211ENST00000534216 TANGO6Q9C0B7 1094 aa6.31□□□□□ -1.4
ATPAF1-211ENST00000534216 SLC6A17Q9H1V8 727 aa6.31□□□□□ -1.4
ATPAF1-211ENST00000534216 TAF6LQ9Y6J9 622 aa6.31□□□□□ -1.4
ATPAF1-211ENST00000534216 SUSD5O60279 629 aa6.3□□□□□ -1.4
ATPAF1-211ENST00000534216 FARP2O94887 1054 aaPredicted RBP6.3□□□□□ -1.4
ATPAF1-211ENST00000534216 KCNH1O95259 989 aa6.3□□□□□ -1.4
ATPAF1-211ENST00000534216 GJB6O95452 261 aa6.3□□□□□ -1.4
ATPAF1-211ENST00000534216 MESP2Q0VG99 397 aa6.3□□□□□ -1.4
ATPAF1-211ENST00000534216 KIR3DS1Q14943 382 aa6.3□□□□□ -1.4
ATPAF1-211ENST00000534216 ZNF648Q5T619 568 aaPredicted RBP6.3□□□□□ -1.4
ATPAF1-211ENST00000534216 HLA-DQA1Q5Y7H0 255 aa6.3□□□□□ -1.4
ATPAF1-211ENST00000534216 EEF1DP3Q658K8 133 aa6.3□□□□□ -1.4
ATPAF1-211ENST00000534216 POMZP3Q6PJE2 187 aa6.3□□□□□ -1.4
ATPAF1-211ENST00000534216 IRF2BP1Q8IU81 584 aa6.3□□□□□ -1.4
ATPAF1-211ENST00000534216 SIRT2Q8IXJ6 389 aa6.3□□□□□ -1.4
ATPAF1-211ENST00000534216 JMJD8Q96S16 334 aa6.3□□□□□ -1.4
ATPAF1-211ENST00000534216 DIRC2Q96SL1 478 aa6.3□□□□□ -1.4
ATPAF1-211ENST00000534216 NSUN3Q9H649 340 aaKnown RBP6.3□□□□□ -1.4
ATPAF1-211ENST00000534216 CRTAC1Q9NQ79 661 aa6.3□□□□□ -1.4
ATPAF1-211ENST00000534216 ST7Q9NRC1 585 aa6.3□□□□□ -1.4
ATPAF1-211ENST00000534216 C2orf71A6NGG8 1288 aa6.29□□□□□ -1.4
ATPAF1-211ENST00000534216 NOP56O00567 594 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-211ENST00000534216 STK10O94804 968 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-211ENST00000534216 DDR2Q16832 855 aa6.29□□□□□ -1.4
ATPAF1-211ENST00000534216 SV2CQ496J9 727 aa6.29□□□□□ -1.4
ATPAF1-211ENST00000534216 TRIM59Q8IWR1 403 aa6.29□□□□□ -1.4
ATPAF1-211ENST00000534216 CRACR2BQ8N4Y2 399 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-211ENST00000534216 PPP1R14AQ96A00 147 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms