RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 TXNRD2Q9NNW7 524 aa17.53■□□□□ 0.4
PDCD6-211ENST00000515587 BRCA2P51587 3418 aa17.53■□□□□ 0.4
PDCD6-211ENST00000515587 CEP290O15078 2479 aa17.52■□□□□ 0.4
PDCD6-211ENST00000515587 OAZ1P54368 228 aa17.52■□□□□ 0.4
PDCD6-211ENST00000515587 AK2P54819 239 aa17.52■□□□□ 0.4
PDCD6-211ENST00000515587 ZNF274Q96GC6 653 aaPredicted RBP17.52■□□□□ 0.4
PDCD6-211ENST00000515587 KIF2CQ99661 725 aa17.52■□□□□ 0.4
PDCD6-211ENST00000515587 BTBD7Q9P203 1132 aa17.52■□□□□ 0.4
PDCD6-211ENST00000515587 PNMA2Q9UL42 364 aa17.52■□□□□ 0.4
PDCD6-211ENST00000515587 ST18O60284 1047 aa17.51■□□□□ 0.39
PDCD6-211ENST00000515587 CNMDO75829 334 aa17.51■□□□□ 0.39
PDCD6-211ENST00000515587 COPB2P35606 906 aa17.51■□□□□ 0.39
PDCD6-211ENST00000515587 STAT3P40763 770 aa17.51■□□□□ 0.39
PDCD6-211ENST00000515587 EVCP57679 992 aa17.51■□□□□ 0.39
PDCD6-211ENST00000515587 LACTBP83111 547 aaPredicted RBP17.51■□□□□ 0.39
PDCD6-211ENST00000515587 TMEM132BQ14DG7 1078 aa17.51■□□□□ 0.39
PDCD6-211ENST00000515587 CCDC174Q6PII3 467 aa17.51■□□□□ 0.39
PDCD6-211ENST00000515587 ADGRF4Q8IZF3 695 aa17.51■□□□□ 0.39
PDCD6-211ENST00000515587 CPXCR1Q8N123 301 aa17.51■□□□□ 0.39
PDCD6-211ENST00000515587 TEX13BQ9BXU2 312 aa17.51■□□□□ 0.39
PDCD6-211ENST00000515587 SPATC1LQ9H0A9 340 aa17.51■□□□□ 0.39
PDCD6-211ENST00000515587 RANBP17Q9H2T7 1088 aaKnown RBP17.51■□□□□ 0.39
PDCD6-211ENST00000515587 VAT1LQ9HCJ6 419 aa17.51■□□□□ 0.39
PDCD6-211ENST00000515587 BAZ2BQ9UIF8 2168 aaKnown RBP17.51■□□□□ 0.39
PDCD6-211ENST00000515587 PTPN22Q9Y2R2 807 aa17.51■□□□□ 0.39
PDCD6-211ENST00000515587 CENPFP49454 3210 aa17.5■□□□□ 0.39
PDCD6-211ENST00000515587 SLC25A27O95847 323 aa17.5■□□□□ 0.39
PDCD6-211ENST00000515587 SMARCA1P28370 1054 aa17.5■□□□□ 0.39
PDCD6-211ENST00000515587 PDIA3P30101 505 aaKnown RBP17.5■□□□□ 0.39
PDCD6-211ENST00000515587 MAPK4P31152 587 aa17.5■□□□□ 0.39
PDCD6-211ENST00000515587 SLC4A3P48751 1232 aa17.5■□□□□ 0.39
PDCD6-211ENST00000515587 FCGRTP55899 365 aa17.5■□□□□ 0.39
PDCD6-211ENST00000515587 WDR78Q5VTH9 848 aa17.5■□□□□ 0.39
PDCD6-211ENST00000515587 SNRNP48Q6IEG0 339 aaKnown RBP17.5■□□□□ 0.39
PDCD6-211ENST00000515587 POTEEQ6S8J3 1075 aa17.5■□□□□ 0.39
PDCD6-211ENST00000515587 ARMC5Q96C12 935 aa17.5■□□□□ 0.39
PDCD6-211ENST00000515587 CPVLQ9H3G5 476 aa17.5■□□□□ 0.39
PDCD6-211ENST00000515587 RAVER2Q9HCJ3 691 aaKnown RBP17.5■□□□□ 0.39
PDCD6-211ENST00000515587 ZNF214Q9UL59 606 aaPredicted RBP17.5■□□□□ 0.39
PDCD6-211ENST00000515587 ATP2A1O14983 1001 aa17.49■□□□□ 0.39
PDCD6-211ENST00000515587 PEX10O60683 326 aa17.49■□□□□ 0.39
PDCD6-211ENST00000515587 FMNL1O95466 1100 aaPredicted RBP17.49■□□□□ 0.39
PDCD6-211ENST00000515587 PSMC4P43686 418 aa17.49■□□□□ 0.39
PDCD6-211ENST00000515587 SNAP25P60880 206 aa17.49■□□□□ 0.39
PDCD6-211ENST00000515587 TRAF1Q13077 416 aa17.49■□□□□ 0.39
PDCD6-211ENST00000515587 CDC37Q16543 378 aaPredicted RBP17.49■□□□□ 0.39
PDCD6-211ENST00000515587 Q3C1V9 767 aa17.49■□□□□ 0.39
PDCD6-211ENST00000515587 CHRDL2Q6WN34 429 aa17.49■□□□□ 0.39
PDCD6-211ENST00000515587 TMTC3Q6ZXV5 915 aa17.49■□□□□ 0.39
PDCD6-211ENST00000515587 NOL8Q76FK4 1167 aaKnown RBP17.49■□□□□ 0.39
PDCD6-211ENST00000515587 NCAPG2Q86XI2 1143 aa17.49■□□□□ 0.39
PDCD6-211ENST00000515587 SHCBP1Q8NEM2 672 aa17.49■□□□□ 0.39
PDCD6-211ENST00000515587 REPS2Q8NFH8 660 aa17.49■□□□□ 0.39
PDCD6-211ENST00000515587 CD99L2Q8TCZ2 262 aa17.49■□□□□ 0.39
PDCD6-211ENST00000515587 RRP36Q96EU6 259 aaKnown RBP17.49■□□□□ 0.39
PDCD6-211ENST00000515587 LARP6Q9BRS8 491 aaKnown RBP17.49■□□□□ 0.39
PDCD6-211ENST00000515587 SPZ1Q9BXG8 430 aa17.49■□□□□ 0.39
PDCD6-211ENST00000515587 MOV10L1Q9BXT6 1211 aaKnown RBP17.49■□□□□ 0.39
PDCD6-211ENST00000515587 SLKQ9H2G2 1235 aaPredicted RBP17.49■□□□□ 0.39
PDCD6-211ENST00000515587 MROH8Q9H579 483 aa17.49■□□□□ 0.39
PDCD6-211ENST00000515587 JMJD4Q9H9V9 463 aa17.49■□□□□ 0.39
PDCD6-211ENST00000515587 CCPG1Q9ULG6 757 aa17.49■□□□□ 0.39
PDCD6-211ENST00000515587 NID2Q14112 1375 aa17.49■□□□□ 0.39
PDCD6-211ENST00000515587 CUL9Q8IWT3 2517 aa17.49■□□□□ 0.39
PDCD6-211ENST00000515587 TNPO2O14787 897 aaKnown RBP17.48■□□□□ 0.39
PDCD6-211ENST00000515587 PLEKHA8P1O95397 391 aa17.48■□□□□ 0.39
PDCD6-211ENST00000515587 ICAM1P05362 532 aa17.48■□□□□ 0.39
PDCD6-211ENST00000515587 STK3Q13188 491 aa17.48■□□□□ 0.39
PDCD6-211ENST00000515587 TKFCQ3LXA3 575 aa17.48■□□□□ 0.39
PDCD6-211ENST00000515587 CPLX2Q6PUV4 134 aaKnown RBP17.48■□□□□ 0.39
PDCD6-211ENST00000515587 RIOX2Q8IUF8 465 aa17.48■□□□□ 0.39
PDCD6-211ENST00000515587 COA7Q96BR5 231 aa17.48■□□□□ 0.39
PDCD6-211ENST00000515587 RIOX1Q9H6W3 641 aa17.48■□□□□ 0.39
PDCD6-211ENST00000515587 SEC63Q9UGP8 760 aaKnown RBP17.48■□□□□ 0.39
PDCD6-211ENST00000515587 LIMCH1Q9UPQ0 1083 aa17.48■□□□□ 0.39
PDCD6-211ENST00000515587 IVNS1ABPQ9Y6Y0 642 aa17.48■□□□□ 0.39
PDCD6-211ENST00000515587 PLXNB2O15031 1838 aa17.48■□□□□ 0.39
PDCD6-211ENST00000515587 CPLX1O14810 134 aa17.47■□□□□ 0.39
PDCD6-211ENST00000515587 ECM2O94769 699 aaPredicted RBP17.47■□□□□ 0.39
PDCD6-211ENST00000515587 GNRH1P01148 92 aa17.47■□□□□ 0.39
PDCD6-211ENST00000515587 HOXD10P28358 340 aa17.47■□□□□ 0.39
PDCD6-211ENST00000515587 CCT2P78371 535 aaKnown RBP17.47■□□□□ 0.39
PDCD6-211ENST00000515587 CAP1Q01518 475 aa17.47■□□□□ 0.39
PDCD6-211ENST00000515587 FBXO11Q86XK2 927 aa17.47■□□□□ 0.39
PDCD6-211ENST00000515587 HOMER1Q86YM7 354 aa17.47■□□□□ 0.39
PDCD6-211ENST00000515587 CCDC82Q8N4S0 544 aa17.47■□□□□ 0.39
PDCD6-211ENST00000515587 SRBD1Q8N5C6 995 aaKnown RBP17.47■□□□□ 0.39
PDCD6-211ENST00000515587 AGBL1Q96MI9 1066 aa17.47■□□□□ 0.39
PDCD6-211ENST00000515587 RBM27Q9P2N5 1060 aaKnown RBP17.47■□□□□ 0.39
PDCD6-211ENST00000515587 FBXO40Q9UH90 709 aa17.47■□□□□ 0.39
PDCD6-211ENST00000515587 TPCN1Q9ULQ1 816 aa17.47■□□□□ 0.39
PDCD6-211ENST00000515587 ZSWIM8A7E2V4 1837 aa17.47■□□□□ 0.39
PDCD6-211ENST00000515587 RBBP6Q7Z6E9 1792 aaKnown RBP17.46■□□□□ 0.39
PDCD6-211ENST00000515587 ZBTB5O15062 677 aa17.46■□□□□ 0.39
PDCD6-211ENST00000515587 ALAS1P13196 640 aa17.46■□□□□ 0.39
PDCD6-211ENST00000515587 ERCC3P19447 782 aa17.46■□□□□ 0.39
PDCD6-211ENST00000515587 CDC27P30260 824 aa17.46■□□□□ 0.39
PDCD6-211ENST00000515587 ADD1P35611 737 aaKnown RBP17.46■□□□□ 0.39
PDCD6-211ENST00000515587 QRICH1Q2TAL8 776 aa17.46■□□□□ 0.39
PDCD6-211ENST00000515587 PLEKHH3Q7Z736 793 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms