RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 USP17L5A8MUK1 530 aa12.63□□□□□ -0.39
CHMP3-209ENST00000494623 CCDC175P0C221 793 aa12.63□□□□□ -0.39
CHMP3-209ENST00000494623 COPB1P53618 953 aaKnown RBP12.63□□□□□ -0.39
CHMP3-209ENST00000494623 SOGA3Q5TF21 947 aa12.63□□□□□ -0.39
CHMP3-209ENST00000494623 CERS3Q8IU89 383 aa12.63□□□□□ -0.39
CHMP3-209ENST00000494623 ANKRD20A12PQ8NF67 263 aa12.63□□□□□ -0.39
CHMP3-209ENST00000494623 PIGSQ96S52 555 aa12.63□□□□□ -0.39
CHMP3-209ENST00000494623 ZMYND12Q9H0C1 365 aa12.63□□□□□ -0.39
CHMP3-209ENST00000494623 C6orf50Q9HD87 102 aa12.63□□□□□ -0.39
CHMP3-209ENST00000494623 SEC63Q9UGP8 760 aaKnown RBP12.63□□□□□ -0.39
CHMP3-209ENST00000494623 NHSQ6T4R5 1651 aa12.63□□□□□ -0.39
CHMP3-209ENST00000494623 A0A0U1RQJ8 604 aa12.63□□□□□ -0.39
CHMP3-209ENST00000494623 LRRC10BA6NIK2 292 aa12.63□□□□□ -0.39
CHMP3-209ENST00000494623 MFAP3LO75121 409 aa12.63□□□□□ -0.39
CHMP3-209ENST00000494623 GYPCP04921 128 aa12.63□□□□□ -0.39
CHMP3-209ENST00000494623 TPM1P09493 284 aa12.63□□□□□ -0.39
CHMP3-209ENST00000494623 JAKMIP3Q5VZ66 844 aa12.63□□□□□ -0.39
CHMP3-209ENST00000494623 SLF2Q8IX21 1173 aa12.63□□□□□ -0.39
CHMP3-209ENST00000494623 ATRIPQ8WXE1 791 aa12.63□□□□□ -0.39
CHMP3-209ENST00000494623 SPZ1Q9BXG8 430 aa12.63□□□□□ -0.39
CHMP3-209ENST00000494623 BIN2Q9UBW5 565 aaPredicted RBP12.63□□□□□ -0.39
CHMP3-209ENST00000494623 FRMPD2Q68DX3 1309 aaPredicted RBP12.62□□□□□ -0.39
CHMP3-209ENST00000494623 SBF2Q86WG5 1849 aa12.62□□□□□ -0.39
CHMP3-209ENST00000494623 SPAG1Q07617 926 aa12.62□□□□□ -0.39
CHMP3-209ENST00000494623 NONOQ15233 471 aaKnown RBP eCLIP12.62□□□□□ -0.39
CHMP3-209ENST00000494623 CCDC12Q8WUD4 166 aaPredicted RBP12.62□□□□□ -0.39
CHMP3-209ENST00000494623 NAA15Q9BXJ9 866 aaKnown RBP12.62□□□□□ -0.39
CHMP3-209ENST00000494623 ADGRG1Q9Y653 693 aa12.62□□□□□ -0.39
CHMP3-209ENST00000494623 H7C1D1 291 aa12.62□□□□□ -0.39
CHMP3-209ENST00000494623 RNF225M0QZC1 329 aaPredicted RBP12.62□□□□□ -0.39
CHMP3-209ENST00000494623 PES1O00541 588 aaKnown RBP12.62□□□□□ -0.39
CHMP3-209ENST00000494623 GNA11P29992 359 aa12.62□□□□□ -0.39
CHMP3-209ENST00000494623 TECP42680 631 aa12.62□□□□□ -0.39
CHMP3-209ENST00000494623 PMS1P54277 932 aaKnown RBP12.62□□□□□ -0.39
CHMP3-209ENST00000494623 EIF6P56537 245 aaKnown RBP12.62□□□□□ -0.39
CHMP3-209ENST00000494623 UBXN1Q04323 297 aa12.62□□□□□ -0.39
CHMP3-209ENST00000494623 TXNRD1Q16881 649 aa12.62□□□□□ -0.39
CHMP3-209ENST00000494623 KRT25Q7Z3Z0 450 aa12.62□□□□□ -0.39
CHMP3-209ENST00000494623 CABP7Q86V35 215 aa12.62□□□□□ -0.39
CHMP3-209ENST00000494623 CNGA4Q8IV77 575 aa12.62□□□□□ -0.39
CHMP3-209ENST00000494623 ADSSL1Q8N142 457 aa12.62□□□□□ -0.39
CHMP3-209ENST00000494623 FAM163AQ96GL9 167 aaPredicted RBP12.62□□□□□ -0.39
CHMP3-209ENST00000494623 NUP88Q99567 741 aaPredicted RBP12.62□□□□□ -0.39
CHMP3-209ENST00000494623 SRRTQ9BXP5 876 aaKnown RBP12.62□□□□□ -0.39
CHMP3-209ENST00000494623 CCSER1Q9C0I3 900 aa12.62□□□□□ -0.39
CHMP3-209ENST00000494623 TAF1LQ8IZX4 1826 aa12.61□□□□□ -0.39
CHMP3-209ENST00000494623 LAD1O00515 517 aa12.61□□□□□ -0.39
CHMP3-209ENST00000494623 OR52Z1P0C646 297 aa12.61□□□□□ -0.39
CHMP3-209ENST00000494623 LRRC15Q8TF66 581 aa12.61□□□□□ -0.39
CHMP3-209ENST00000494623 TBC1D22AQ8WUA7 517 aa12.61□□□□□ -0.39
CHMP3-209ENST00000494623 TMEM260Q9NX78 707 aa12.61□□□□□ -0.39
CHMP3-209ENST00000494623 KLRC4O43908 158 aa12.61□□□□□ -0.39
CHMP3-209ENST00000494623 MAP3K9P80192 1104 aa12.61□□□□□ -0.39
CHMP3-209ENST00000494623 DDR1Q08345 913 aa12.61□□□□□ -0.39
CHMP3-209ENST00000494623 NEK8Q86SG6 692 aa12.61□□□□□ -0.39
CHMP3-209ENST00000494623 TBCKQ8TEA7 893 aa12.61□□□□□ -0.39
CHMP3-209ENST00000494623 KBTBD4Q9NVX7 518 aa12.61□□□□□ -0.39
CHMP3-209ENST00000494623 DAGLAQ9Y4D2 1042 aa12.61□□□□□ -0.39
CHMP3-209ENST00000494623 SNED1Q8TER0 1413 aa12.61□□□□□ -0.39
CHMP3-209ENST00000494623 ZSCAN20P17040 1043 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-209ENST00000494623 PLCG1P19174 1290 aa12.61□□□□□ -0.39
CHMP3-209ENST00000494623 PRPHP41219 470 aa12.61□□□□□ -0.39
CHMP3-209ENST00000494623 IRF2BP1Q8IU81 584 aa12.61□□□□□ -0.39
CHMP3-209ENST00000494623 LRRC47Q8N1G4 583 aaKnown RBP12.61□□□□□ -0.39
CHMP3-209ENST00000494623 KIFC2Q96AC6 838 aa12.61□□□□□ -0.39
CHMP3-209ENST00000494623 EEF2KMTQ96G04 330 aa12.61□□□□□ -0.39
CHMP3-209ENST00000494623 EPC1Q9H2F5 836 aa12.61□□□□□ -0.39
CHMP3-209ENST00000494623 ZNF446Q9NWS9 450 aa12.61□□□□□ -0.39
CHMP3-209ENST00000494623 SPATA31A6Q5VVP1 1343 aa12.6□□□□□ -0.39
CHMP3-209ENST00000494623 ITIH6Q6UXX5 1313 aa12.6□□□□□ -0.39
CHMP3-209ENST00000494623 H2AFXP16104 143 aaPredicted RBP12.6□□□□□ -0.39
CHMP3-209ENST00000494623 STIM1Q13586 685 aa12.6□□□□□ -0.39
CHMP3-209ENST00000494623 KCNB1Q14721 858 aa12.6□□□□□ -0.39
CHMP3-209ENST00000494623 CLEC10AQ8IUN9 316 aa12.6□□□□□ -0.39
CHMP3-209ENST00000494623 COA7Q96BR5 231 aa12.6□□□□□ -0.39
CHMP3-209ENST00000494623 MXD3Q9BW11 206 aa12.6□□□□□ -0.39
CHMP3-209ENST00000494623 GAKO14976 1311 aa12.6□□□□□ -0.39
CHMP3-209ENST00000494623 AFF2P51816 1311 aa12.6□□□□□ -0.39
CHMP3-209ENST00000494623 NAV1Q8NEY1 1877 aa12.6□□□□□ -0.39
CHMP3-209ENST00000494623 TADA3O75528 432 aa12.6□□□□□ -0.39
CHMP3-209ENST00000494623 HOXA10P31260 410 aaPredicted RBP12.6□□□□□ -0.39
CHMP3-209ENST00000494623 TXKP42681 527 aa12.6□□□□□ -0.39
CHMP3-209ENST00000494623 ACRBPQ8NEB7 543 aa12.6□□□□□ -0.39
CHMP3-209ENST00000494623 CCDC51Q96ER9 411 aa12.6□□□□□ -0.39
CHMP3-209ENST00000494623 TRIM47Q96LD4 638 aa12.6□□□□□ -0.39
CHMP3-209ENST00000494623 GPCPD1Q9NPB8 672 aa12.6□□□□□ -0.39
CHMP3-209ENST00000494623 ABHD10Q9NUJ1 306 aa12.6□□□□□ -0.39
CHMP3-209ENST00000494623 THSD7AQ9UPZ6 1657 aa12.59□□□□□ -0.39
CHMP3-209ENST00000494623 LY75O60449 1722 aa12.59□□□□□ -0.39
CHMP3-209ENST00000494623 EFCAB8A8MWE9 144 aa12.59□□□□□ -0.39
CHMP3-209ENST00000494623 PSMA7O14818 248 aa12.59□□□□□ -0.39
CHMP3-209ENST00000494623 RHOBTB3O94955 611 aa12.59□□□□□ -0.39
CHMP3-209ENST00000494623 PDHBP11177 359 aa12.59□□□□□ -0.39
CHMP3-209ENST00000494623 AKR1B1P15121 316 aa12.59□□□□□ -0.39
CHMP3-209ENST00000494623 KRT9P35527 623 aa12.59□□□□□ -0.39
CHMP3-209ENST00000494623 CLCN6P51797 869 aa12.59□□□□□ -0.39
CHMP3-209ENST00000494623 ERVK-24P63145 666 aa12.59□□□□□ -0.39
CHMP3-209ENST00000494623 PPP2R3AQ06190 1150 aa12.59□□□□□ -0.39
CHMP3-209ENST00000494623 DPP8Q6V1X1 898 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-209ENST00000494623 REXO1Q8N1G1 1221 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms