RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 CGGBP1Q9UFW8 167 aaPredicted RBP6.01□□□□□ -1.45
RFC4-213ENST00000489028 GPR160Q9UJ42 338 aa6.01□□□□□ -1.45
RFC4-213ENST00000489028 NRDCO43847 1150 aa6□□□□□ -1.45
RFC4-213ENST00000489028 CD3EP07766 207 aa6□□□□□ -1.45
RFC4-213ENST00000489028 LARP1BQ659C4 914 aaKnown RBP6□□□□□ -1.45
RFC4-213ENST00000489028 CWF19L1Q69YN2 538 aaKnown RBP6□□□□□ -1.45
RFC4-213ENST00000489028 MPZL3Q6UWV2 235 aa6□□□□□ -1.45
RFC4-213ENST00000489028 SLCO6A1Q86UG4 719 aa6□□□□□ -1.45
RFC4-213ENST00000489028 SPPL2CQ8IUH8 684 aa6□□□□□ -1.45
RFC4-213ENST00000489028 DIRC2Q96SL1 478 aa6□□□□□ -1.45
RFC4-213ENST00000489028 YBX2Q9Y2T7 364 aaKnown RBP6□□□□□ -1.45
RFC4-213ENST00000489028 VAMP4O75379 141 aa5.99□□□□□ -1.45
RFC4-213ENST00000489028 HSF5Q4G112 596 aaPredicted RBP5.99□□□□□ -1.45
RFC4-213ENST00000489028 TNNI3KQ59H18 835 aa5.99□□□□□ -1.45
RFC4-213ENST00000489028 MRM1Q6IN84 353 aaKnown RBP5.99□□□□□ -1.45
RFC4-213ENST00000489028 ADAT2Q7Z6V5 191 aaKnown RBP5.99□□□□□ -1.45
RFC4-213ENST00000489028 SIRT2Q8IXJ6 389 aa5.99□□□□□ -1.45
RFC4-213ENST00000489028 ARHGEF39Q8N4T4 335 aa5.99□□□□□ -1.45
RFC4-213ENST00000489028 HNRNPLLQ8WVV9 542 aaKnown RBP5.99□□□□□ -1.45
RFC4-213ENST00000489028 JMJD8Q96S16 334 aa5.99□□□□□ -1.45
RFC4-213ENST00000489028 GBP3Q9H0R5 595 aa5.99□□□□□ -1.45
RFC4-213ENST00000489028 NSUN3Q9H649 340 aaKnown RBP5.99□□□□□ -1.45
RFC4-213ENST00000489028 FAM53CQ9NYF3 392 aa5.99□□□□□ -1.45
RFC4-213ENST00000489028 TNFRSF10DQ9UBN6 386 aa5.99□□□□□ -1.45
RFC4-213ENST00000489028 DIS3Q9Y2L1 958 aaKnown RBP5.99□□□□□ -1.45
RFC4-213ENST00000489028 SF3B6Q9Y3B4 125 aaKnown RBP5.99□□□□□ -1.45
RFC4-213ENST00000489028 ANKRD34BA5PLL1 514 aa5.98□□□□□ -1.45
RFC4-213ENST00000489028 FGF10O15520 208 aaPredicted RBP5.98□□□□□ -1.45
RFC4-213ENST00000489028 PPM1BO75688 479 aa5.98□□□□□ -1.45
RFC4-213ENST00000489028 RTP1P59025 263 aa5.98□□□□□ -1.45
RFC4-213ENST00000489028 ZC3H6P61129 1189 aaKnown RBP5.98□□□□□ -1.45
RFC4-213ENST00000489028 SLC14A2Q15849 920 aa5.98□□□□□ -1.45
RFC4-213ENST00000489028 DPY19L1Q2PZI1 675 aa5.98□□□□□ -1.45
RFC4-213ENST00000489028 NAALADL2Q58DX5 795 aa5.98□□□□□ -1.45
RFC4-213ENST00000489028 FAM178BQ8IXR5 827 aa5.98□□□□□ -1.45
RFC4-213ENST00000489028 CELF2-AS1Q8N7Q2 184 aa5.98□□□□□ -1.45
RFC4-213ENST00000489028 INTS4Q96HW7 963 aaKnown RBP5.98□□□□□ -1.45
RFC4-213ENST00000489028 GOLGA2P5Q9HBQ8 144 aa5.98□□□□□ -1.45
RFC4-213ENST00000489028 STXBP3O00186 592 aa5.97□□□□□ -1.45
RFC4-213ENST00000489028 AURKAO14965 403 aa5.97□□□□□ -1.45
RFC4-213ENST00000489028 FARP2O94887 1054 aaPredicted RBP5.97□□□□□ -1.45
RFC4-213ENST00000489028 C8AP07357 584 aa5.97□□□□□ -1.45
RFC4-213ENST00000489028 ENDOUP21128 410 aaKnown RBP5.97□□□□□ -1.45
RFC4-213ENST00000489028 SDHBP21912 280 aa5.97□□□□□ -1.45
RFC4-213ENST00000489028 POU4F1Q01851 419 aa5.97□□□□□ -1.45
RFC4-213ENST00000489028 NCAPHQ15003 741 aa5.97□□□□□ -1.45
RFC4-213ENST00000489028 SNX17Q15036 470 aa5.97□□□□□ -1.45
RFC4-213ENST00000489028 RCC1LQ96I51 464 aaKnown RBP5.97□□□□□ -1.45
RFC4-213ENST00000489028 CWC22Q9HCG8 908 aaKnown RBP5.97□□□□□ -1.45
RFC4-213ENST00000489028 SUGT1Q9Y2Z0 365 aa5.97□□□□□ -1.45
RFC4-213ENST00000489028 KLF4O43474 513 aa5.96□□□□□ -1.46
RFC4-213ENST00000489028 GJB6O95452 261 aa5.96□□□□□ -1.46
RFC4-213ENST00000489028 MSL3P1P0C860 447 aa5.96□□□□□ -1.46
RFC4-213ENST00000489028 ZNF124Q15973 351 aa5.96□□□□□ -1.46
RFC4-213ENST00000489028 PTCHD1Q96NR3 888 aa5.96□□□□□ -1.46
RFC4-213ENST00000489028 SLC6A17Q9H1V8 727 aa5.96□□□□□ -1.46
RFC4-213ENST00000489028 EPB41L4BQ9H329 900 aa5.96□□□□□ -1.46
RFC4-213ENST00000489028 IMPACTQ9P2X3 320 aa5.96□□□□□ -1.46
RFC4-213ENST00000489028 EMC9Q9Y3B6 208 aa5.96□□□□□ -1.46
RFC4-213ENST00000489028 TBX1O43435 398 aa5.95□□□□□ -1.46
RFC4-213ENST00000489028 SUSD5O60279 629 aa5.95□□□□□ -1.46
RFC4-213ENST00000489028 DDAH1O94760 285 aa5.95□□□□□ -1.46
RFC4-213ENST00000489028 KRT1P04264 644 aa5.95□□□□□ -1.46
RFC4-213ENST00000489028 NOP2P46087 812 aaKnown RBP5.95□□□□□ -1.46
RFC4-213ENST00000489028 ZNF143P52747 638 aaPredicted RBP5.95□□□□□ -1.46
RFC4-213ENST00000489028 CYP4F3Q08477 520 aa5.95□□□□□ -1.46
RFC4-213ENST00000489028 GRB10Q13322 594 aa5.95□□□□□ -1.46
RFC4-213ENST00000489028 RCSD1Q6JBY9 416 aa5.95□□□□□ -1.46
RFC4-213ENST00000489028 GALNT18Q6P9A2 607 aa5.95□□□□□ -1.46
RFC4-213ENST00000489028 ANKS3Q6ZW76 656 aa5.95□□□□□ -1.46
RFC4-213ENST00000489028 IRF2BP1Q8IU81 584 aa5.95□□□□□ -1.46
RFC4-213ENST00000489028 NAT16Q8N8M0 369 aa5.95□□□□□ -1.46
RFC4-213ENST00000489028 FAM84AQ96KN4 292 aa5.95□□□□□ -1.46
RFC4-213ENST00000489028 MRGPRX3Q96LB0 322 aa5.95□□□□□ -1.46
RFC4-213ENST00000489028 APBA2Q99767 749 aa5.95□□□□□ -1.46
RFC4-213ENST00000489028 DCP1AQ9NPI6 582 aaPredicted RBP5.95□□□□□ -1.46
RFC4-213ENST00000489028 AKT3Q9Y243 479 aa5.95□□□□□ -1.46
RFC4-213ENST00000489028 TAF6LQ9Y6J9 622 aa5.95□□□□□ -1.46
RFC4-213ENST00000489028 MYOCOSA0A1B0GUC4 107 aa5.94□□□□□ -1.46
RFC4-213ENST00000489028 A0A1W2PQ45 241 aaPredicted RBP5.94□□□□□ -1.46
RFC4-213ENST00000489028 A0A1W2PQY0 241 aa5.94□□□□□ -1.46
RFC4-213ENST00000489028 WTIPA6NIX2 430 aaPredicted RBP5.94□□□□□ -1.46
RFC4-213ENST00000489028 KCNH1O95259 989 aa5.94□□□□□ -1.46
RFC4-213ENST00000489028 PNLIPP16233 465 aa5.94□□□□□ -1.46
RFC4-213ENST00000489028 PRKCAP17252 672 aa5.94□□□□□ -1.46
RFC4-213ENST00000489028 PDE6BP35913 854 aa5.94□□□□□ -1.46
RFC4-213ENST00000489028 AMPD2Q01433 879 aa5.94□□□□□ -1.46
RFC4-213ENST00000489028 MVKQ03426 396 aa5.94□□□□□ -1.46
RFC4-213ENST00000489028 FXNQ16595 210 aa5.94□□□□□ -1.46
RFC4-213ENST00000489028 ADGRF1Q5T601 910 aa5.94□□□□□ -1.46
RFC4-213ENST00000489028 CYP2R1Q6VVX0 501 aa5.94□□□□□ -1.46
RFC4-213ENST00000489028 BVESQ8NE79 360 aa5.94□□□□□ -1.46
RFC4-213ENST00000489028 CRTAC1Q9NQ79 661 aa5.94□□□□□ -1.46
RFC4-213ENST00000489028 ST7Q9NRC1 585 aa5.94□□□□□ -1.46
RFC4-213ENST00000489028 ACSL6Q9UKU0 697 aa5.94□□□□□ -1.46
RFC4-213ENST00000489028 C2orf71A6NGG8 1288 aa5.93□□□□□ -1.46
RFC4-213ENST00000489028 ITGAVP06756 1048 aa5.93□□□□□ -1.46
RFC4-213ENST00000489028 HLA-DQA1Q5Y7H0 255 aa5.93□□□□□ -1.46
RFC4-213ENST00000489028 GTF2IRD2BQ6EKJ0 949 aa5.93□□□□□ -1.46
RFC4-213ENST00000489028 SYDE1Q6ZW31 735 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms