RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 MCMBPQ9BTE3 642 aa8.49□□□□□ -1.05
LTN1-206ENST00000486427 GOLGA2P5Q9HBQ8 144 aa8.49□□□□□ -1.05
LTN1-206ENST00000486427 CGGBP1Q9UFW8 167 aaPredicted RBP8.49□□□□□ -1.05
LTN1-206ENST00000486427 SF3B6Q9Y3B4 125 aaKnown RBP8.49□□□□□ -1.05
LTN1-206ENST00000486427 ANKRD34BA5PLL1 514 aa8.48□□□□□ -1.05
LTN1-206ENST00000486427 FADS2P1A8MWK0 482 aa8.48□□□□□ -1.05
LTN1-206ENST00000486427 PPM1BO75688 479 aa8.48□□□□□ -1.05
LTN1-206ENST00000486427 CD3EP07766 207 aa8.48□□□□□ -1.05
LTN1-206ENST00000486427 IFNGR1P15260 489 aa8.48□□□□□ -1.05
LTN1-206ENST00000486427 NCAPHQ15003 741 aa8.48□□□□□ -1.05
LTN1-206ENST00000486427 CEP128Q6ZU80 1094 aa8.48□□□□□ -1.05
LTN1-206ENST00000486427 ARHGEF39Q8N4T4 335 aa8.48□□□□□ -1.05
LTN1-206ENST00000486427 GPR160Q9UJ42 338 aa8.48□□□□□ -1.05
LTN1-206ENST00000486427 GPR55Q9Y2T6 319 aaPredicted RBP8.48□□□□□ -1.05
LTN1-206ENST00000486427 VAMP4O75379 141 aa8.47□□□□□ -1.05
LTN1-206ENST00000486427 MLANAQ16655 118 aa8.47□□□□□ -1.05
LTN1-206ENST00000486427 MRM1Q6IN84 353 aaKnown RBP8.47□□□□□ -1.05
LTN1-206ENST00000486427 PRR23BQ6ZRT6 265 aa8.47□□□□□ -1.05
LTN1-206ENST00000486427 ANKS3Q6ZW76 656 aa8.47□□□□□ -1.05
LTN1-206ENST00000486427 CELF2-AS1Q8N7Q2 184 aa8.47□□□□□ -1.05
LTN1-206ENST00000486427 PLCD4Q9BRC7 762 aa8.47□□□□□ -1.05
LTN1-206ENST00000486427 LGR4Q9BXB1 951 aa8.47□□□□□ -1.05
LTN1-206ENST00000486427 TNFRSF10DQ9UBN6 386 aa8.47□□□□□ -1.05
LTN1-206ENST00000486427 SUGT1Q9Y2Z0 365 aa8.47□□□□□ -1.05
LTN1-206ENST00000486427 LRRC10BA6NIK2 292 aa8.46□□□□□ -1.06
LTN1-206ENST00000486427 NRDCO43847 1150 aa8.46□□□□□ -1.06
LTN1-206ENST00000486427 ENDOUP21128 410 aaKnown RBP8.46□□□□□ -1.06
LTN1-206ENST00000486427 POU4F1Q01851 419 aa8.46□□□□□ -1.06
LTN1-206ENST00000486427 KIR3DS1Q14943 382 aa8.46□□□□□ -1.06
LTN1-206ENST00000486427 MPZL3Q6UWV2 235 aa8.46□□□□□ -1.06
LTN1-206ENST00000486427 NLRX1Q86UT6 975 aa8.46□□□□□ -1.06
LTN1-206ENST00000486427 RCC1LQ96I51 464 aaKnown RBP8.46□□□□□ -1.06
LTN1-206ENST00000486427 C8orf37Q96NL8 207 aa8.46□□□□□ -1.06
LTN1-206ENST00000486427 FGF10O15520 208 aaPredicted RBP8.45□□□□□ -1.06
LTN1-206ENST00000486427 KLF4O43474 513 aa8.45□□□□□ -1.06
LTN1-206ENST00000486427 DDAH1O94760 285 aa8.45□□□□□ -1.06
LTN1-206ENST00000486427 TXKP42681 527 aa8.45□□□□□ -1.06
LTN1-206ENST00000486427 RTP1P59025 263 aa8.45□□□□□ -1.06
LTN1-206ENST00000486427 SLC14A2Q15849 920 aa8.45□□□□□ -1.06
LTN1-206ENST00000486427 FXNQ16595 210 aa8.45□□□□□ -1.06
LTN1-206ENST00000486427 DPY19L1Q2PZI1 675 aa8.45□□□□□ -1.06
LTN1-206ENST00000486427 HSF5Q4G112 596 aaPredicted RBP8.45□□□□□ -1.06
LTN1-206ENST00000486427 SLCO6A1Q86UG4 719 aa8.45□□□□□ -1.06
LTN1-206ENST00000486427 SIRT2Q8IXJ6 389 aa8.45□□□□□ -1.06
LTN1-206ENST00000486427 APBA2Q99767 749 aa8.45□□□□□ -1.06
LTN1-206ENST00000486427 KCNK12Q9HB15 430 aa8.45□□□□□ -1.06
LTN1-206ENST00000486427 YBX2Q9Y2T7 364 aaKnown RBP8.45□□□□□ -1.06
LTN1-206ENST00000486427 STXBP3O00186 592 aa8.44□□□□□ -1.06
LTN1-206ENST00000486427 GJB6O95452 261 aa8.44□□□□□ -1.06
LTN1-206ENST00000486427 NOP2P46087 812 aaKnown RBP8.44□□□□□ -1.06
LTN1-206ENST00000486427 ZNF143P52747 638 aaPredicted RBP8.44□□□□□ -1.06
LTN1-206ENST00000486427 POU5F2Q8N7G0 328 aa8.44□□□□□ -1.06
LTN1-206ENST00000486427 JMJD8Q96S16 334 aa8.44□□□□□ -1.06
LTN1-206ENST00000486427 DIRC2Q96SL1 478 aa8.44□□□□□ -1.06
LTN1-206ENST00000486427 CWC22Q9HCG8 908 aaKnown RBP8.44□□□□□ -1.06
LTN1-206ENST00000486427 ST7Q9NRC1 585 aa8.44□□□□□ -1.06
LTN1-206ENST00000486427 FAM53CQ9NYF3 392 aa8.44□□□□□ -1.06
LTN1-206ENST00000486427 AKT3Q9Y243 479 aa8.44□□□□□ -1.06
LTN1-206ENST00000486427 EMC9Q9Y3B6 208 aa8.44□□□□□ -1.06
LTN1-206ENST00000486427 AURKAO14965 403 aa8.43□□□□□ -1.06
LTN1-206ENST00000486427 MESP2Q0VG99 397 aa8.43□□□□□ -1.06
LTN1-206ENST00000486427 GRB10Q13322 594 aa8.43□□□□□ -1.06
LTN1-206ENST00000486427 SNX17Q15036 470 aa8.43□□□□□ -1.06
LTN1-206ENST00000486427 ZNF648Q5T619 568 aaPredicted RBP8.43□□□□□ -1.06
LTN1-206ENST00000486427 NAT16Q8N8M0 369 aa8.43□□□□□ -1.06
LTN1-206ENST00000486427 BVESQ8NE79 360 aa8.43□□□□□ -1.06
LTN1-206ENST00000486427 INTS4Q96HW7 963 aaKnown RBP8.43□□□□□ -1.06
LTN1-206ENST00000486427 NSUN3Q9H649 340 aaKnown RBP8.43□□□□□ -1.06
LTN1-206ENST00000486427 SUSD5O60279 629 aa8.42□□□□□ -1.06
LTN1-206ENST00000486427 AMPD2Q01433 879 aa8.42□□□□□ -1.06
LTN1-206ENST00000486427 PPP1R14AQ96A00 147 aa8.42□□□□□ -1.06
LTN1-206ENST00000486427 PTCHD1Q96NR3 888 aa8.42□□□□□ -1.06
LTN1-206ENST00000486427 TANGO6Q9C0B7 1094 aa8.42□□□□□ -1.06
LTN1-206ENST00000486427 A0A1W2PQ45 241 aaPredicted RBP8.41□□□□□ -1.06
LTN1-206ENST00000486427 A0A1W2PQY0 241 aa8.41□□□□□ -1.06
LTN1-206ENST00000486427 KCNH1O95259 989 aa8.41□□□□□ -1.06
LTN1-206ENST00000486427 NAT2P11245 290 aa8.41□□□□□ -1.06
LTN1-206ENST00000486427 RCSD1Q6JBY9 416 aa8.41□□□□□ -1.06
LTN1-206ENST00000486427 MRGPRX3Q96LB0 322 aa8.41□□□□□ -1.06
LTN1-206ENST00000486427 SLC6A17Q9H1V8 727 aa8.41□□□□□ -1.06
LTN1-206ENST00000486427 R3HCC1Q9Y3T6 440 aaKnown RBP8.41□□□□□ -1.06
LTN1-206ENST00000486427 TAF6LQ9Y6J9 622 aa8.41□□□□□ -1.06
LTN1-206ENST00000486427 WTIPA6NIX2 430 aaPredicted RBP8.4□□□□□ -1.06
LTN1-206ENST00000486427 TBX1O43435 398 aa8.4□□□□□ -1.06
LTN1-206ENST00000486427 DDR2Q16832 855 aa8.4□□□□□ -1.06
LTN1-206ENST00000486427 GALNT18Q6P9A2 607 aa8.4□□□□□ -1.06
LTN1-206ENST00000486427 TRIM59Q8IWR1 403 aa8.4□□□□□ -1.06
LTN1-206ENST00000486427 IMPACTQ9P2X3 320 aa8.4□□□□□ -1.06
LTN1-206ENST00000486427 BACE2Q9Y5Z0 518 aa8.4□□□□□ -1.06
LTN1-206ENST00000486427 C2orf71A6NGG8 1288 aa8.39□□□□□ -1.07
LTN1-206ENST00000486427 STK10O94804 968 aaKnown RBP8.39□□□□□ -1.07
LTN1-206ENST00000486427 FARP2O94887 1054 aaPredicted RBP8.39□□□□□ -1.07
LTN1-206ENST00000486427 ITGAVP06756 1048 aa8.39□□□□□ -1.07
LTN1-206ENST00000486427 RAB33AQ14088 237 aa8.39□□□□□ -1.07
LTN1-206ENST00000486427 SV2CQ496J9 727 aa8.39□□□□□ -1.07
LTN1-206ENST00000486427 HLA-DQA1Q5Y7H0 255 aa8.39□□□□□ -1.07
LTN1-206ENST00000486427 GTF2IRD2BQ6EKJ0 949 aa8.39□□□□□ -1.07
LTN1-206ENST00000486427 CYP2R1Q6VVX0 501 aa8.39□□□□□ -1.07
LTN1-206ENST00000486427 GTF2IRD2Q86UP8 949 aa8.39□□□□□ -1.07
LTN1-206ENST00000486427 CRTAC1Q9NQ79 661 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms