RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 M0R2N6 131 aa16.69■□□□□ 0.26
HIF3A-206ENST00000472815 USP14P54578 494 aa16.69■□□□□ 0.26
HIF3A-206ENST00000472815 NONOQ15233 471 aaKnown RBP eCLIP16.69■□□□□ 0.26
HIF3A-206ENST00000472815 MAP3K11Q16584 847 aa16.69■□□□□ 0.26
HIF3A-206ENST00000472815 MCTP2Q6DN12 878 aa16.69■□□□□ 0.26
HIF3A-206ENST00000472815 TEX2Q8IWB9 1127 aa16.69■□□□□ 0.26
HIF3A-206ENST00000472815 ACER1Q8TDN7 264 aa16.69■□□□□ 0.26
HIF3A-206ENST00000472815 FERMT2Q96AC1 680 aa16.69■□□□□ 0.26
HIF3A-206ENST00000472815 AMNQ9BXJ7 453 aa16.69■□□□□ 0.26
HIF3A-206ENST00000472815 ZNF112Q9UJU3 913 aa16.69■□□□□ 0.26
HIF3A-206ENST00000472815 NR1I2O75469 434 aa16.68■□□□□ 0.26
HIF3A-206ENST00000472815 HIRAP54198 1017 aaPredicted RBP16.68■□□□□ 0.26
HIF3A-206ENST00000472815 ORC2Q13416 577 aaPredicted RBP16.68■□□□□ 0.26
HIF3A-206ENST00000472815 QRICH1Q2TAL8 776 aa16.68■□□□□ 0.26
HIF3A-206ENST00000472815 SCYL3Q8IZE3 742 aa16.68■□□□□ 0.26
HIF3A-206ENST00000472815 SPICE1Q8N0Z3 855 aa16.68■□□□□ 0.26
HIF3A-206ENST00000472815 ZNF579Q8NAF0 562 aaKnown RBP16.68■□□□□ 0.26
HIF3A-206ENST00000472815 WRNIP1Q96S55 665 aa16.68■□□□□ 0.26
HIF3A-206ENST00000472815 CLSTN2Q9H4D0 955 aa16.68■□□□□ 0.26
HIF3A-206ENST00000472815 RIC8AQ9NPQ8 531 aa16.68■□□□□ 0.26
HIF3A-206ENST00000472815 FEM1BQ9UK73 627 aa16.68■□□□□ 0.26
HIF3A-206ENST00000472815 PTPREP23469 700 aa16.67■□□□□ 0.26
HIF3A-206ENST00000472815 DEKP35659 375 aaKnown RBP16.67■□□□□ 0.26
HIF3A-206ENST00000472815 MRE11P49959 708 aa16.67■□□□□ 0.26
HIF3A-206ENST00000472815 AXDND1Q5T1B0 1012 aaPredicted RBP16.67■□□□□ 0.26
HIF3A-206ENST00000472815 ZC3H15Q8WU90 426 aaKnown RBP16.67■□□□□ 0.26
HIF3A-206ENST00000472815 COA7Q96BR5 231 aa16.67■□□□□ 0.26
HIF3A-206ENST00000472815 NUP88Q99567 741 aaPredicted RBP16.67■□□□□ 0.26
HIF3A-206ENST00000472815 KIAA1683Q9H0B3 1180 aa16.67■□□□□ 0.26
HIF3A-206ENST00000472815 FAM13BQ9NYF5 915 aa16.67■□□□□ 0.26
HIF3A-206ENST00000472815 PCDHA1Q9Y5I3 950 aa16.67■□□□□ 0.26
HIF3A-206ENST00000472815 SRPRBQ9Y5M8 271 aaKnown RBP16.67■□□□□ 0.26
HIF3A-206ENST00000472815 FSD2A1L4K1 749 aa16.67■□□□□ 0.26
HIF3A-206ENST00000472815 LAD1O00515 517 aa16.67■□□□□ 0.26
HIF3A-206ENST00000472815 WDR46O15213 610 aaKnown RBP16.67■□□□□ 0.26
HIF3A-206ENST00000472815 FAM83BQ5T0W9 1011 aa16.67■□□□□ 0.26
HIF3A-206ENST00000472815 FBXO11Q86XK2 927 aa16.67■□□□□ 0.26
HIF3A-206ENST00000472815 FAM205CA6NFA0 338 aa16.66■□□□□ 0.26
HIF3A-206ENST00000472815 NF2P35240 595 aa16.66■□□□□ 0.26
HIF3A-206ENST00000472815 EARS2Q5JPH6 523 aaKnown RBP16.66■□□□□ 0.26
HIF3A-206ENST00000472815 ARL6IP4Q66PJ3 421 aaKnown RBP16.66■□□□□ 0.26
HIF3A-206ENST00000472815 CCDC34Q96HJ3 373 aa16.66■□□□□ 0.26
HIF3A-206ENST00000472815 TSPY26PQ9H489 355 aa16.66■□□□□ 0.26
HIF3A-206ENST00000472815 PSTPIP2Q9H939 334 aa16.66■□□□□ 0.26
HIF3A-206ENST00000472815 A0A1B0GVL5 298 aa16.65■□□□□ 0.26
HIF3A-206ENST00000472815 PPP1R12BO60237 982 aaPredicted RBP16.65■□□□□ 0.26
HIF3A-206ENST00000472815 EPHX2P34913 555 aa16.65■□□□□ 0.26
HIF3A-206ENST00000472815 ATP2C1P98194 919 aaPredicted RBP16.65■□□□□ 0.26
HIF3A-206ENST00000472815 ZNF174Q15697 407 aa16.65■□□□□ 0.26
HIF3A-206ENST00000472815 ZYXQ15942 572 aaKnown RBP16.65■□□□□ 0.26
HIF3A-206ENST00000472815 RESP18Q5W5W9 173 aa16.65■□□□□ 0.26
HIF3A-206ENST00000472815 ENGASEQ8NFI3 743 aa16.65■□□□□ 0.26
HIF3A-206ENST00000472815 RASGRP4Q8TDF6 673 aa16.65■□□□□ 0.26
HIF3A-206ENST00000472815 NAP1L4Q99733 375 aaKnown RBP16.65■□□□□ 0.26
HIF3A-206ENST00000472815 WDR18Q9BV38 432 aa16.65■□□□□ 0.26
HIF3A-206ENST00000472815 PRR12Q9ULL5 1215 aa16.65■□□□□ 0.26
HIF3A-206ENST00000472815 POTECB2RU33 542 aa16.65■□□□□ 0.26
HIF3A-206ENST00000472815 CCDC192P0DO97 292 aa16.65■□□□□ 0.26
HIF3A-206ENST00000472815 INPP5BP32019 993 aa16.65■□□□□ 0.26
HIF3A-206ENST00000472815 SYKP43405 635 aa16.65■□□□□ 0.26
HIF3A-206ENST00000472815 SNW1Q13573 536 aaKnown RBP16.65■□□□□ 0.26
HIF3A-206ENST00000472815 INF2Q27J81 1249 aa16.65■□□□□ 0.26
HIF3A-206ENST00000472815 NEK8Q86SG6 692 aa16.65■□□□□ 0.26
HIF3A-206ENST00000472815 PNMA8AQ86V59 439 aaPredicted RBP16.65■□□□□ 0.26
HIF3A-206ENST00000472815 FMR1NBQ8N0W7 255 aaPredicted RBP16.65■□□□□ 0.26
HIF3A-206ENST00000472815 KLRG1Q96E93 195 aa16.65■□□□□ 0.26
HIF3A-206ENST00000472815 GOLPH3LQ9H4A5 285 aa16.65■□□□□ 0.26
HIF3A-206ENST00000472815 TAF1DQ9H5J8 278 aaPredicted RBP16.65■□□□□ 0.26
HIF3A-206ENST00000472815 RRAGCQ9HB90 399 aa16.65■□□□□ 0.26
HIF3A-206ENST00000472815 FBXO2Q9UK22 296 aaPredicted RBP16.65■□□□□ 0.26
HIF3A-206ENST00000472815 PNMA2Q9UL42 364 aa16.65■□□□□ 0.26
HIF3A-206ENST00000472815 FAM237AA0A1B0GTK4 181 aa16.64■□□□□ 0.25
HIF3A-206ENST00000472815 PPP1R11O60927 126 aaPredicted RBP16.64■□□□□ 0.25
HIF3A-206ENST00000472815 PFKFB1P16118 471 aa16.64■□□□□ 0.25
HIF3A-206ENST00000472815 MCM7P33993 719 aa16.64■□□□□ 0.25
HIF3A-206ENST00000472815 NDUFA8P51970 172 aa16.64■□□□□ 0.25
HIF3A-206ENST00000472815 PTGDRQ13258 359 aa16.64■□□□□ 0.25
HIF3A-206ENST00000472815 NOL9Q5SY16 702 aaKnown RBP16.64■□□□□ 0.25
HIF3A-206ENST00000472815 KRT26Q7Z3Y9 468 aa16.64■□□□□ 0.25
HIF3A-206ENST00000472815 ZNF280CQ8ND82 737 aa16.64■□□□□ 0.25
HIF3A-206ENST00000472815 ZNF526Q8TF50 670 aaPredicted RBP16.64■□□□□ 0.25
HIF3A-206ENST00000472815 TIGD1Q96MW7 591 aa16.64■□□□□ 0.25
HIF3A-206ENST00000472815 SDF4Q9BRK5 362 aa16.64■□□□□ 0.25
HIF3A-206ENST00000472815 PYM1Q9BRP8 204 aaKnown RBP16.64■□□□□ 0.25
HIF3A-206ENST00000472815 GRPEL1Q9HAV7 217 aa16.64■□□□□ 0.25
HIF3A-206ENST00000472815 BIN2Q9UBW5 565 aaPredicted RBP16.64■□□□□ 0.25
HIF3A-206ENST00000472815 HOOK1Q9UJC3 728 aaKnown RBP16.64■□□□□ 0.25
HIF3A-206ENST00000472815 C19orf81C9J6K1 198 aa16.63■□□□□ 0.25
HIF3A-206ENST00000472815 AP3B2Q13367 1082 aa16.63■□□□□ 0.25
HIF3A-206ENST00000472815 CAMK4Q16566 473 aa16.63■□□□□ 0.25
HIF3A-206ENST00000472815 JAKMIP3Q5VZ66 844 aa16.63■□□□□ 0.25
HIF3A-206ENST00000472815 KIFC2Q96AC6 838 aa16.63■□□□□ 0.25
HIF3A-206ENST00000472815 ZNF202O95125 648 aa16.62■□□□□ 0.25
HIF3A-206ENST00000472815 FDX1P10109 184 aa16.62■□□□□ 0.25
HIF3A-206ENST00000472815 PTPRAP18433 802 aa16.62■□□□□ 0.25
HIF3A-206ENST00000472815 YY1P25490 414 aa16.62■□□□□ 0.25
HIF3A-206ENST00000472815 NOM1Q5C9Z4 860 aaKnown RBP16.62■□□□□ 0.25
HIF3A-206ENST00000472815 PRAMEF18Q5VWM3 479 aa16.62■□□□□ 0.25
HIF3A-206ENST00000472815 SHC4Q6S5L8 630 aa16.62■□□□□ 0.25
HIF3A-206ENST00000472815 SASS6Q6UVJ0 657 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms