RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 YBX2Q9Y2T7 364 aaKnown RBP6.32□□□□□ -1.4
VPS13D-203ENST00000466732 KRTAP9-6A0A140TA67 174 aa6.31□□□□□ -1.4
VPS13D-203ENST00000466732 ANKRD34BA5PLL1 514 aa6.31□□□□□ -1.4
VPS13D-203ENST00000466732 PPM1BO75688 479 aa6.31□□□□□ -1.4
VPS13D-203ENST00000466732 NOP2P46087 812 aaKnown RBP6.31□□□□□ -1.4
VPS13D-203ENST00000466732 RTP1P59025 263 aa6.31□□□□□ -1.4
VPS13D-203ENST00000466732 POU4F1Q01851 419 aa6.31□□□□□ -1.4
VPS13D-203ENST00000466732 NLRX1Q86UT6 975 aa6.31□□□□□ -1.4
VPS13D-203ENST00000466732 TMEM52Q8NDY8 209 aa6.31□□□□□ -1.4
VPS13D-203ENST00000466732 DIRC2Q96SL1 478 aa6.31□□□□□ -1.4
VPS13D-203ENST00000466732 KRTAP4-12Q9BQ66 201 aa6.31□□□□□ -1.4
VPS13D-203ENST00000466732 SLC6A17Q9H1V8 727 aa6.31□□□□□ -1.4
VPS13D-203ENST00000466732 NSUN3Q9H649 340 aaKnown RBP6.31□□□□□ -1.4
VPS13D-203ENST00000466732 GOLGA2P5Q9HBQ8 144 aa6.31□□□□□ -1.4
VPS13D-203ENST00000466732 GPR55Q9Y2T6 319 aaPredicted RBP6.31□□□□□ -1.4
VPS13D-203ENST00000466732 CD3EP07766 207 aa6.3□□□□□ -1.4
VPS13D-203ENST00000466732 IFNGR1P15260 489 aa6.3□□□□□ -1.4
VPS13D-203ENST00000466732 NCAPHQ15003 741 aa6.3□□□□□ -1.4
VPS13D-203ENST00000466732 HSF5Q4G112 596 aaPredicted RBP6.3□□□□□ -1.4
VPS13D-203ENST00000466732 LARP1BQ659C4 914 aaKnown RBP6.3□□□□□ -1.4
VPS13D-203ENST00000466732 C6orf15Q6UXA7 325 aaPredicted RBP6.3□□□□□ -1.4
VPS13D-203ENST00000466732 SLCO6A1Q86UG4 719 aa6.3□□□□□ -1.4
VPS13D-203ENST00000466732 SIRT2Q8IXJ6 389 aa6.3□□□□□ -1.4
VPS13D-203ENST00000466732 ARHGEF39Q8N4T4 335 aa6.3□□□□□ -1.4
VPS13D-203ENST00000466732 ZNF513Q8N8E2 541 aaPredicted RBP6.3□□□□□ -1.4
VPS13D-203ENST00000466732 INTS4Q96HW7 963 aaKnown RBP6.3□□□□□ -1.4
VPS13D-203ENST00000466732 RCC1LQ96I51 464 aaKnown RBP6.3□□□□□ -1.4
VPS13D-203ENST00000466732 PLCD4Q9BRC7 762 aa6.3□□□□□ -1.4
VPS13D-203ENST00000466732 CGGBP1Q9UFW8 167 aaPredicted RBP6.3□□□□□ -1.4
VPS13D-203ENST00000466732 SUGT1Q9Y2Z0 365 aa6.3□□□□□ -1.4
VPS13D-203ENST00000466732 FGF10O15520 208 aaPredicted RBP6.29□□□□□ -1.4
VPS13D-203ENST00000466732 VAMP4O75379 141 aa6.29□□□□□ -1.4
VPS13D-203ENST00000466732 ZNF143P52747 638 aaPredicted RBP6.29□□□□□ -1.4
VPS13D-203ENST00000466732 ZC3H6P61129 1189 aaKnown RBP6.29□□□□□ -1.4
VPS13D-203ENST00000466732 GALNT18Q6P9A2 607 aa6.29□□□□□ -1.4
VPS13D-203ENST00000466732 IRF2BP1Q8IU81 584 aa6.29□□□□□ -1.4
VPS13D-203ENST00000466732 FAM178BQ8IXR5 827 aa6.29□□□□□ -1.4
VPS13D-203ENST00000466732 NAT16Q8N8M0 369 aa6.29□□□□□ -1.4
VPS13D-203ENST00000466732 FAM84AQ96KN4 292 aa6.29□□□□□ -1.4
VPS13D-203ENST00000466732 APBA2Q99767 749 aa6.29□□□□□ -1.4
VPS13D-203ENST00000466732 MCMBPQ9BTE3 642 aa6.29□□□□□ -1.4
VPS13D-203ENST00000466732 EPB41L4BQ9H329 900 aa6.29□□□□□ -1.4
VPS13D-203ENST00000466732 KCNK12Q9HB15 430 aa6.29□□□□□ -1.4
VPS13D-203ENST00000466732 APEX2Q9UBZ4 518 aa6.29□□□□□ -1.4
VPS13D-203ENST00000466732 A0A1W2PQ45 241 aaPredicted RBP6.28□□□□□ -1.4
VPS13D-203ENST00000466732 A0A1W2PQY0 241 aa6.28□□□□□ -1.4
VPS13D-203ENST00000466732 WTIPA6NIX2 430 aaPredicted RBP6.28□□□□□ -1.4
VPS13D-203ENST00000466732 B2RBV5 119 aa6.28□□□□□ -1.4
VPS13D-203ENST00000466732 C8AP07357 584 aa6.28□□□□□ -1.4
VPS13D-203ENST00000466732 NAT2P11245 290 aa6.28□□□□□ -1.4
VPS13D-203ENST00000466732 KIR3DS1Q14943 382 aa6.28□□□□□ -1.4
VPS13D-203ENST00000466732 DPY19L1Q2PZI1 675 aa6.28□□□□□ -1.4
VPS13D-203ENST00000466732 NAALADL2Q58DX5 795 aa6.28□□□□□ -1.4
VPS13D-203ENST00000466732 KRTAP19-1Q8IUB9 90 aa6.28□□□□□ -1.4
VPS13D-203ENST00000466732 KSR1Q8IVT5 923 aa6.28□□□□□ -1.4
VPS13D-203ENST00000466732 MICAL1Q8TDZ2 1067 aa6.28□□□□□ -1.4
VPS13D-203ENST00000466732 JMJD8Q96S16 334 aa6.28□□□□□ -1.4
VPS13D-203ENST00000466732 DCP1AQ9NPI6 582 aaPredicted RBP6.28□□□□□ -1.4
VPS13D-203ENST00000466732 CRTAC1Q9NQ79 661 aa6.28□□□□□ -1.4
VPS13D-203ENST00000466732 AKT3Q9Y243 479 aa6.28□□□□□ -1.4
VPS13D-203ENST00000466732 TAF6LQ9Y6J9 622 aa6.28□□□□□ -1.4
VPS13D-203ENST00000466732 STXBP3O00186 592 aa6.27□□□□□ -1.41
VPS13D-203ENST00000466732 AURKAO14965 403 aa6.27□□□□□ -1.41
VPS13D-203ENST00000466732 AMPD2Q01433 879 aa6.27□□□□□ -1.41
VPS13D-203ENST00000466732 GRB10Q13322 594 aa6.27□□□□□ -1.41
VPS13D-203ENST00000466732 FXNQ16595 210 aa6.27□□□□□ -1.41
VPS13D-203ENST00000466732 HLA-DQA1Q5Y7H0 255 aa6.27□□□□□ -1.41
VPS13D-203ENST00000466732 CYP2R1Q6VVX0 501 aa6.27□□□□□ -1.41
VPS13D-203ENST00000466732 FBXO15Q8NCQ5 510 aaPredicted RBP6.27□□□□□ -1.41
VPS13D-203ENST00000466732 BVESQ8NE79 360 aa6.27□□□□□ -1.41
VPS13D-203ENST00000466732 PTCHD1Q96NR3 888 aa6.27□□□□□ -1.41
VPS13D-203ENST00000466732 SLC38A3Q99624 504 aa6.27□□□□□ -1.41
VPS13D-203ENST00000466732 EMC9Q9Y3B6 208 aa6.27□□□□□ -1.41
VPS13D-203ENST00000466732 DDAH1O94760 285 aa6.26□□□□□ -1.41
VPS13D-203ENST00000466732 PNLIPP16233 465 aa6.26□□□□□ -1.41
VPS13D-203ENST00000466732 PRKCAP17252 672 aa6.26□□□□□ -1.41
VPS13D-203ENST00000466732 PDE6BP35913 854 aa6.26□□□□□ -1.41
VPS13D-203ENST00000466732 ZNF124Q15973 351 aa6.26□□□□□ -1.41
VPS13D-203ENST00000466732 RCSD1Q6JBY9 416 aa6.26□□□□□ -1.41
VPS13D-203ENST00000466732 SYDE1Q6ZW31 735 aaPredicted RBP6.26□□□□□ -1.41
VPS13D-203ENST00000466732 ANKS3Q6ZW76 656 aa6.26□□□□□ -1.41
VPS13D-203ENST00000466732 NUP43Q8NFH3 380 aa6.26□□□□□ -1.41
VPS13D-203ENST00000466732 HNRNPLLQ8WVV9 542 aaKnown RBP6.26□□□□□ -1.41
VPS13D-203ENST00000466732 IMPACTQ9P2X3 320 aa6.26□□□□□ -1.41
VPS13D-203ENST00000466732 ACSL6Q9UKU0 697 aa6.26□□□□□ -1.41
VPS13D-203ENST00000466732 KCNH1O95259 989 aa6.25□□□□□ -1.41
VPS13D-203ENST00000466732 TBC1D8O95759 1140 aa6.25□□□□□ -1.41
VPS13D-203ENST00000466732 ADGRF1Q5T601 910 aa6.25□□□□□ -1.41
VPS13D-203ENST00000466732 EEF1DP3Q658K8 133 aa6.25□□□□□ -1.41
VPS13D-203ENST00000466732 MRM1Q6IN84 353 aaKnown RBP6.25□□□□□ -1.41
VPS13D-203ENST00000466732 ZNF605Q86T29 641 aa6.25□□□□□ -1.41
VPS13D-203ENST00000466732 JAMLQ86YT9 394 aa6.25□□□□□ -1.41
VPS13D-203ENST00000466732 PPP1R14AQ96A00 147 aa6.25□□□□□ -1.41
VPS13D-203ENST00000466732 LGR4Q9BXB1 951 aa6.25□□□□□ -1.41
VPS13D-203ENST00000466732 ZNF552Q9H707 407 aaPredicted RBP6.25□□□□□ -1.41
VPS13D-203ENST00000466732 R3HCC1Q9Y3T6 440 aaKnown RBP6.25□□□□□ -1.41
VPS13D-203ENST00000466732 BACE2Q9Y5Z0 518 aa6.25□□□□□ -1.41
VPS13D-203ENST00000466732 OR14I1A6ND48 311 aa6.24□□□□□ -1.41
VPS13D-203ENST00000466732 C2orf71A6NGG8 1288 aa6.24□□□□□ -1.41
VPS13D-203ENST00000466732 NOP56O00567 594 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms