RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 SHISA4Q96DD7 197 aa7.35□□□□□ -1.23
RNU4-28P-201ENST00000364739 FCRL3Q96P31 734 aaPredicted RBP7.35□□□□□ -1.23
RNU4-28P-201ENST00000364739 MCMBPQ9BTE3 642 aa7.35□□□□□ -1.23
RNU4-28P-201ENST00000364739 ERVK13-1Q9NX77 482 aa7.35□□□□□ -1.23
RNU4-28P-201ENST00000364739 APEX2Q9UBZ4 518 aa7.35□□□□□ -1.23
RNU4-28P-201ENST00000364739 DBX1A6NMT0 343 aa7.34□□□□□ -1.23
RNU4-28P-201ENST00000364739 CD3EP07766 207 aa7.34□□□□□ -1.23
RNU4-28P-201ENST00000364739 IFNGR1P15260 489 aa7.34□□□□□ -1.23
RNU4-28P-201ENST00000364739 SDHBP21912 280 aa7.34□□□□□ -1.23
RNU4-28P-201ENST00000364739 RTP1P59025 263 aa7.34□□□□□ -1.23
RNU4-28P-201ENST00000364739 DPY19L1Q2PZI1 675 aa7.34□□□□□ -1.23
RNU4-28P-201ENST00000364739 C6orf15Q6UXA7 325 aaPredicted RBP7.34□□□□□ -1.23
RNU4-28P-201ENST00000364739 PLCD4Q9BRC7 762 aa7.34□□□□□ -1.23
RNU4-28P-201ENST00000364739 NSUN3Q9H649 340 aaKnown RBP7.34□□□□□ -1.23
RNU4-28P-201ENST00000364739 ACTR10Q9NZ32 417 aa7.34□□□□□ -1.23
RNU4-28P-201ENST00000364739 WHRNQ9P202 907 aa7.34□□□□□ -1.23
RNU4-28P-201ENST00000364739 GPR55Q9Y2T6 319 aaPredicted RBP7.34□□□□□ -1.23
RNU4-28P-201ENST00000364739 SUGT1Q9Y2Z0 365 aa7.34□□□□□ -1.23
RNU4-28P-201ENST00000364739 FADS2P1A8MWK0 482 aa7.33□□□□□ -1.24
RNU4-28P-201ENST00000364739 CHRNEQ04844 493 aa7.33□□□□□ -1.24
RNU4-28P-201ENST00000364739 NR0B2Q15466 257 aa7.33□□□□□ -1.24
RNU4-28P-201ENST00000364739 FCRL2Q96LA5 508 aaPredicted RBP7.33□□□□□ -1.24
RNU4-28P-201ENST00000364739 PRKAG3Q9UGI9 489 aa7.33□□□□□ -1.24
RNU4-28P-201ENST00000364739 DIS3Q9Y2L1 958 aaKnown RBP7.33□□□□□ -1.24
RNU4-28P-201ENST00000364739 SF3B6Q9Y3B4 125 aaKnown RBP7.33□□□□□ -1.24
RNU4-28P-201ENST00000364739 PPM1BO75688 479 aa7.32□□□□□ -1.24
RNU4-28P-201ENST00000364739 KIR2DL1P43626 348 aaPredicted RBP7.32□□□□□ -1.24
RNU4-28P-201ENST00000364739 KIR2DL2P43627 348 aaPredicted RBP7.32□□□□□ -1.24
RNU4-28P-201ENST00000364739 MESP2Q0VG99 397 aa7.32□□□□□ -1.24
RNU4-28P-201ENST00000364739 ZNF124Q15973 351 aa7.32□□□□□ -1.24
RNU4-28P-201ENST00000364739 NAALADL2Q58DX5 795 aa7.32□□□□□ -1.24
RNU4-28P-201ENST00000364739 LCE4AQ5TA78 99 aa7.32□□□□□ -1.24
RNU4-28P-201ENST00000364739 LILRA2Q8N149 483 aa7.32□□□□□ -1.24
RNU4-28P-201ENST00000364739 ZNF513Q8N8E2 541 aaPredicted RBP7.32□□□□□ -1.24
RNU4-28P-201ENST00000364739 SLC43A3Q8NBI5 491 aa7.32□□□□□ -1.24
RNU4-28P-201ENST00000364739 HNRNPLLQ8WVV9 542 aaKnown RBP7.32□□□□□ -1.24
RNU4-28P-201ENST00000364739 PPP1R14AQ96A00 147 aa7.32□□□□□ -1.24
RNU4-28P-201ENST00000364739 KRTAP4-2Q9BYR5 136 aa7.32□□□□□ -1.24
RNU4-28P-201ENST00000364739 GBP3Q9H0R5 595 aa7.32□□□□□ -1.24
RNU4-28P-201ENST00000364739 ST7Q9NRC1 585 aa7.32□□□□□ -1.24
RNU4-28P-201ENST00000364739 A0A087WZG4 1122 aa7.31□□□□□ -1.24
RNU4-28P-201ENST00000364739 NRDCO43847 1150 aa7.31□□□□□ -1.24
RNU4-28P-201ENST00000364739 DDAH1O94760 285 aa7.31□□□□□ -1.24
RNU4-28P-201ENST00000364739 FARP2O94887 1054 aaPredicted RBP7.31□□□□□ -1.24
RNU4-28P-201ENST00000364739 FBLN7Q53RD9 439 aa7.31□□□□□ -1.24
RNU4-28P-201ENST00000364739 NLRX1Q86UT6 975 aa7.31□□□□□ -1.24
RNU4-28P-201ENST00000364739 NAT16Q8N8M0 369 aa7.31□□□□□ -1.24
RNU4-28P-201ENST00000364739 FAM53CQ9NYF3 392 aa7.31□□□□□ -1.24
RNU4-28P-201ENST00000364739 TNFRSF10DQ9UBN6 386 aa7.31□□□□□ -1.24
RNU4-28P-201ENST00000364739 CGGBP1Q9UFW8 167 aaPredicted RBP7.31□□□□□ -1.24
RNU4-28P-201ENST00000364739 YBX2Q9Y2T7 364 aaKnown RBP7.31□□□□□ -1.24
RNU4-28P-201ENST00000364739 ANKRD34BA5PLL1 514 aa7.3□□□□□ -1.24
RNU4-28P-201ENST00000364739 STXBP3O00186 592 aa7.3□□□□□ -1.24
RNU4-28P-201ENST00000364739 PDE6BP35913 854 aa7.3□□□□□ -1.24
RNU4-28P-201ENST00000364739 NOP2P46087 812 aaKnown RBP7.3□□□□□ -1.24
RNU4-28P-201ENST00000364739 POU4F1Q01851 419 aa7.3□□□□□ -1.24
RNU4-28P-201ENST00000364739 HSF5Q4G112 596 aaPredicted RBP7.3□□□□□ -1.24
RNU4-28P-201ENST00000364739 FAM178BQ8IXR5 827 aa7.3□□□□□ -1.24
RNU4-28P-201ENST00000364739 ARHGEF39Q8N4T4 335 aa7.3□□□□□ -1.24
RNU4-28P-201ENST00000364739 CELF2-AS1Q8N7Q2 184 aa7.3□□□□□ -1.24
RNU4-28P-201ENST00000364739 JMJD8Q96S16 334 aa7.3□□□□□ -1.24
RNU4-28P-201ENST00000364739 GMLQ99445 158 aa7.3□□□□□ -1.24
RNU4-28P-201ENST00000364739 APBA2Q99767 749 aa7.3□□□□□ -1.24
RNU4-28P-201ENST00000364739 DCP1AQ9NPI6 582 aaPredicted RBP7.3□□□□□ -1.24
RNU4-28P-201ENST00000364739 AKT3Q9Y243 479 aa7.3□□□□□ -1.24
RNU4-28P-201ENST00000364739 FGF10O15520 208 aaPredicted RBP7.29□□□□□ -1.24
RNU4-28P-201ENST00000364739 ZC3H6P61129 1189 aaKnown RBP7.29□□□□□ -1.24
RNU4-28P-201ENST00000364739 TNNI3KQ59H18 835 aa7.29□□□□□ -1.24
RNU4-28P-201ENST00000364739 MRM1Q6IN84 353 aaKnown RBP7.29□□□□□ -1.24
RNU4-28P-201ENST00000364739 ANKS3Q6ZW76 656 aa7.29□□□□□ -1.24
RNU4-28P-201ENST00000364739 ZNF605Q86T29 641 aa7.29□□□□□ -1.24
RNU4-28P-201ENST00000364739 SLCO6A1Q86UG4 719 aa7.29□□□□□ -1.24
RNU4-28P-201ENST00000364739 INTS4Q96HW7 963 aaKnown RBP7.29□□□□□ -1.24
RNU4-28P-201ENST00000364739 CWC22Q9HCG8 908 aaKnown RBP7.29□□□□□ -1.24
RNU4-28P-201ENST00000364739 KCNH1O95259 989 aa7.28□□□□□ -1.24
RNU4-28P-201ENST00000364739 GJB6O95452 261 aa7.28□□□□□ -1.24
RNU4-28P-201ENST00000364739 PRKCAP17252 672 aa7.28□□□□□ -1.24
RNU4-28P-201ENST00000364739 NCAPHQ15003 741 aa7.28□□□□□ -1.24
RNU4-28P-201ENST00000364739 SNX17Q15036 470 aa7.28□□□□□ -1.24
RNU4-28P-201ENST00000364739 PKN1Q16512 942 aa7.28□□□□□ -1.24
RNU4-28P-201ENST00000364739 ADGRF1Q5T601 910 aa7.28□□□□□ -1.24
RNU4-28P-201ENST00000364739 SPOCD1Q6ZMY3 1216 aa7.28□□□□□ -1.24
RNU4-28P-201ENST00000364739 SYDE1Q6ZW31 735 aaPredicted RBP7.28□□□□□ -1.24
RNU4-28P-201ENST00000364739 KSR1Q8IVT5 923 aa7.28□□□□□ -1.24
RNU4-28P-201ENST00000364739 RCC1LQ96I51 464 aaKnown RBP7.28□□□□□ -1.24
RNU4-28P-201ENST00000364739 PTCHD1Q96NR3 888 aa7.28□□□□□ -1.24
RNU4-28P-201ENST00000364739 IMPACTQ9P2X3 320 aa7.28□□□□□ -1.24
RNU4-28P-201ENST00000364739 AURKAO14965 403 aa7.27□□□□□ -1.25
RNU4-28P-201ENST00000364739 TBX1O43435 398 aa7.27□□□□□ -1.25
RNU4-28P-201ENST00000364739 MSL3P1P0C860 447 aa7.27□□□□□ -1.25
RNU4-28P-201ENST00000364739 AMPD2Q01433 879 aa7.27□□□□□ -1.25
RNU4-28P-201ENST00000364739 FXNQ16595 210 aa7.27□□□□□ -1.25
RNU4-28P-201ENST00000364739 SV2CQ496J9 727 aa7.27□□□□□ -1.25
RNU4-28P-201ENST00000364739 JAMLQ86YT9 394 aa7.27□□□□□ -1.25
RNU4-28P-201ENST00000364739 BVESQ8NE79 360 aa7.27□□□□□ -1.25
RNU4-28P-201ENST00000364739 NUP43Q8NFH3 380 aa7.27□□□□□ -1.25
RNU4-28P-201ENST00000364739 SLC6A17Q9H1V8 727 aa7.27□□□□□ -1.25
RNU4-28P-201ENST00000364739 EPB41L4BQ9H329 900 aa7.27□□□□□ -1.25
RNU4-28P-201ENST00000364739 GPRC5CQ9NQ84 441 aa7.27□□□□□ -1.25
RNU4-28P-201ENST00000364739 EMC9Q9Y3B6 208 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms