RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 PKN1Q16512 942 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 KIF6Q6ZMV9 814 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 LPIN2Q92539 896 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 FAM89AQ96GI7 184 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 TRIM47Q96LD4 638 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 CCDC85AQ96PX6 553 aaPredicted RBP13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 LACRTQ9GZZ8 138 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 ARMT1Q9H993 441 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 STIM2Q9P246 746 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 RNF14Q9UBS8 474 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 HYOU1Q9Y4L1 999 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 SOS2Q07890 1332 aaPredicted RBP13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 PKD1L3Q7Z443 1732 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 FAM205CA6NFA0 338 aa13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 KIF1CO43896 1103 aaKnown RBP13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 CCDC172P0C7W6 258 aa13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 EMC10Q5UCC4 262 aa13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 FBXW10Q5XX13 1052 aa13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 CCDC47Q96A33 483 aaKnown RBP13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 DHTKD1Q96HY7 919 aaPredicted RBP13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 LRRC1Q9BTT6 524 aa13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 SLC4A4Q9Y6R1 1079 aa13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 AKAP11Q9UKA4 1901 aa13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 BICDL2A1A5D9 508 aa13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 MACROD2A1Z1Q3 448 aa13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 RDXP35241 583 aaKnown RBP13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 STAT6P42226 847 aa13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 PHKA1P46020 1223 aa13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 TBC1D8BQ0IIM8 1120 aa13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 PLCB4Q15147 1175 aa13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 PUM3Q15397 648 aaKnown RBP13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 CCDC96Q2M329 555 aa13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 IFT20Q8IY31 132 aa13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 VGLL2Q8N8G2 317 aa13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 SPATA5Q8NB90 893 aa13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 C1orf131Q8NDD1 294 aaKnown RBP13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 TNFRSF25Q93038 417 aa13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 TSKSQ9UJT2 592 aa13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 V9GY48 417 aaPredicted RBP13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 GLI3P10071 1580 aa13.81□□□□□ -0.2
CHMP2B-201ENST00000263780 DRP2Q13474 957 aa13.8□□□□□ -0.2
CHMP2B-201ENST00000263780 EARS2Q5JPH6 523 aaKnown RBP13.8□□□□□ -0.2
CHMP2B-201ENST00000263780 KCNV1Q6PIU1 500 aa13.8□□□□□ -0.2
CHMP2B-201ENST00000263780 KDM7AQ6ZMT4 941 aa13.8□□□□□ -0.2
CHMP2B-201ENST00000263780 PCMTD1Q96MG8 357 aaPredicted RBP13.8□□□□□ -0.2
CHMP2B-201ENST00000263780 TTYH3Q9C0H2 523 aa13.8□□□□□ -0.2
CHMP2B-201ENST00000263780 GDAQ9Y2T3 454 aa13.8□□□□□ -0.2
CHMP2B-201ENST00000263780 TACC3Q9Y6A5 838 aa13.8□□□□□ -0.2
CHMP2B-201ENST00000263780 SEC23AQ15436 765 aa13.8□□□□□ -0.2
CHMP2B-201ENST00000263780 FKBP15Q5T1M5 1219 aa13.8□□□□□ -0.2
CHMP2B-201ENST00000263780 MTRQ99707 1265 aa13.8□□□□□ -0.2
CHMP2B-201ENST00000263780 TUBGCP2Q9BSJ2 902 aa13.8□□□□□ -0.2
CHMP2B-201ENST00000263780 EPN3Q9H201 632 aa13.8□□□□□ -0.2
CHMP2B-201ENST00000263780 SAMM50Q9Y512 469 aa13.8□□□□□ -0.2
CHMP2B-201ENST00000263780 SLC5A1P13866 664 aa13.79□□□□□ -0.2
CHMP2B-201ENST00000263780 CFAP58Q5T655 872 aa13.79□□□□□ -0.2
CHMP2B-201ENST00000263780 RBM33Q96EV2 1170 aaKnown RBP13.79□□□□□ -0.2
CHMP2B-201ENST00000263780 TNKSO95271 1327 aa13.79□□□□□ -0.2
CHMP2B-201ENST00000263780 RCCD1A6NED2 376 aa13.79□□□□□ -0.2
CHMP2B-201ENST00000263780 CHUKO15111 745 aa13.79□□□□□ -0.2
CHMP2B-201ENST00000263780 FNTAP49354 379 aa13.79□□□□□ -0.2
CHMP2B-201ENST00000263780 CTSWP56202 376 aa13.79□□□□□ -0.2
CHMP2B-201ENST00000263780 PPARAQ07869 468 aa13.79□□□□□ -0.2
CHMP2B-201ENST00000263780 FUT2Q10981 343 aa13.79□□□□□ -0.2
CHMP2B-201ENST00000263780 PAK2Q13177 524 aa13.79□□□□□ -0.2
CHMP2B-201ENST00000263780 TTMPQ5BVD1 217 aa13.79□□□□□ -0.2
CHMP2B-201ENST00000263780 C8orf74Q6P047 294 aa13.79□□□□□ -0.2
CHMP2B-201ENST00000263780 OSBPL9Q96SU4 736 aa13.79□□□□□ -0.2
CHMP2B-201ENST00000263780 SH2D4AQ9H788 454 aa13.79□□□□□ -0.2
CHMP2B-201ENST00000263780 DMGDHQ9UI17 866 aaKnown RBP13.79□□□□□ -0.2
CHMP2B-201ENST00000263780 ANAPC4Q9UJX5 808 aa13.79□□□□□ -0.2
CHMP2B-201ENST00000263780 MAPK8IP1Q9UQF2 711 aa13.79□□□□□ -0.2
CHMP2B-201ENST00000263780 MROH5Q6ZUA9 1318 aa13.79□□□□□ -0.2
CHMP2B-201ENST00000263780 RGPD5Q99666 1765 aa13.79□□□□□ -0.2
CHMP2B-201ENST00000263780 B4DLN1 442 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 HNRNPH3P31942 346 aaKnown RBP13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 CD302Q8IX05 232 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 RRP36Q96EU6 259 aaKnown RBP13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 IFIH1Q9BYX4 1025 aaKnown RBP13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 EHD4Q9H223 541 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 AGPAT5Q9NUQ2 364 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 DONSONQ9NYP3 566 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 TFR2Q9UP52 801 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 DDAH1O94760 285 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 RHOBTB3O94955 611 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 NAP1L1P55209 391 aaKnown RBP13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 NLRP5P59047 1200 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 PDCLQ13371 301 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 IFIT1BQ5T764 474 aaKnown RBP13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 CSGALNACT2Q8N6G5 542 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 ARL8AQ96BM9 186 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 ERGIC2Q96RQ1 377 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 ZSCAN10Q96SZ4 725 aaPredicted RBP13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 GREM2Q9H772 168 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 MAGEF1Q9HAY2 307 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 LRWD1Q9UFC0 647 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 PCDHA13Q9Y5I0 950 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 PCP11498 1178 aaKnown RBP13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 CALML3P27482 149 aa13.78□□□□□ -0.2
CHMP2B-201ENST00000263780 LSP1P33241 339 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms