RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 SLAMF8Q9P0V8 285 aa7.54□□□□□ -1.2
SMAD4-216ENST00000593223 BICRAQ9NZM4 1560 aa7.54□□□□□ -1.2
SMAD4-216ENST00000593223 B2RBV5 119 aa7.53□□□□□ -1.2
SMAD4-216ENST00000593223 CBFA2T2O43439 604 aa7.53□□□□□ -1.2
SMAD4-216ENST00000593223 SYPP08247 313 aa7.53□□□□□ -1.2
SMAD4-216ENST00000593223 NAT2P11245 290 aa7.53□□□□□ -1.2
SMAD4-216ENST00000593223 ZNF445P59923 1031 aa7.53□□□□□ -1.2
SMAD4-216ENST00000593223 ZNF792Q3KQV3 632 aa7.53□□□□□ -1.2
SMAD4-216ENST00000593223 PPP1R14AQ96A00 147 aa7.53□□□□□ -1.2
SMAD4-216ENST00000593223 FOXP3Q9BZS1 431 aa7.53□□□□□ -1.2
SMAD4-216ENST00000593223 NOL6Q9H6R4 1146 aaKnown RBP7.53□□□□□ -1.2
SMAD4-216ENST00000593223 WHRNQ9P202 907 aa7.53□□□□□ -1.2
SMAD4-216ENST00000593223 TCFL5Q9UL49 500 aa7.53□□□□□ -1.2
SMAD4-216ENST00000593223 ANKRD34BA5PLL1 514 aa7.52□□□□□ -1.21
SMAD4-216ENST00000593223 KLF4O43474 513 aa7.52□□□□□ -1.21
SMAD4-216ENST00000593223 FKTNO75072 461 aa7.52□□□□□ -1.21
SMAD4-216ENST00000593223 PPP2R5DQ14738 602 aa7.52□□□□□ -1.21
SMAD4-216ENST00000593223 FIBCD1Q8N539 461 aa7.52□□□□□ -1.21
SMAD4-216ENST00000593223 USHBP1Q8N6Y0 703 aa7.52□□□□□ -1.21
SMAD4-216ENST00000593223 MICAL1Q8TDZ2 1067 aa7.52□□□□□ -1.21
SMAD4-216ENST00000593223 ARMC5Q96C12 935 aa7.52□□□□□ -1.21
SMAD4-216ENST00000593223 ALPK1Q96QP1 1244 aa7.52□□□□□ -1.21
SMAD4-216ENST00000593223 APBA2Q99767 749 aa7.52□□□□□ -1.21
SMAD4-216ENST00000593223 KLHL25Q9H0H3 589 aa7.52□□□□□ -1.21
SMAD4-216ENST00000593223 RC3H2Q9HBD1 1191 aaKnown RBP7.52□□□□□ -1.21
SMAD4-216ENST00000593223 MBNL3Q9NUK0 354 aaKnown RBP7.52□□□□□ -1.21
SMAD4-216ENST00000593223 SF3B6Q9Y3B4 125 aaKnown RBP7.52□□□□□ -1.21
SMAD4-216ENST00000593223 FHOD1Q9Y613 1164 aa7.52□□□□□ -1.21
SMAD4-216ENST00000593223 GJB6O95452 261 aa7.51□□□□□ -1.21
SMAD4-216ENST00000593223 GSNP06396 782 aa7.51□□□□□ -1.21
SMAD4-216ENST00000593223 RNASE1P07998 156 aaKnown RBP7.51□□□□□ -1.21
SMAD4-216ENST00000593223 RPL10P27635 214 aaKnown RBP7.51□□□□□ -1.21
SMAD4-216ENST00000593223 RAB33AQ14088 237 aa7.51□□□□□ -1.21
SMAD4-216ENST00000593223 CRTC3Q6UUV7 619 aa7.51□□□□□ -1.21
SMAD4-216ENST00000593223 RNF111Q6ZNA4 994 aa7.51□□□□□ -1.21
SMAD4-216ENST00000593223 CELF2-AS1Q8N7Q2 184 aa7.51□□□□□ -1.21
SMAD4-216ENST00000593223 CCDC120Q96HB5 630 aa7.51□□□□□ -1.21
SMAD4-216ENST00000593223 DRC1Q96MC2 740 aa7.51□□□□□ -1.21
SMAD4-216ENST00000593223 ZDHHC15Q96MV8 337 aa7.51□□□□□ -1.21
SMAD4-216ENST00000593223 ADAMTS6Q9UKP5 1117 aa7.51□□□□□ -1.21
SMAD4-216ENST00000593223 UNC13AQ9UPW8 1703 aa7.5□□□□□ -1.21
SMAD4-216ENST00000593223 A0A087WZG4 1122 aa7.5□□□□□ -1.21
SMAD4-216ENST00000593223 DDR2Q16832 855 aa7.5□□□□□ -1.21
SMAD4-216ENST00000593223 WAPLQ7Z5K2 1190 aa7.5□□□□□ -1.21
SMAD4-216ENST00000593223 KRTAP19-1Q8IUB9 90 aa7.5□□□□□ -1.21
SMAD4-216ENST00000593223 LINC00116Q8NCU8 138 aa7.5□□□□□ -1.21
SMAD4-216ENST00000593223 PMFBP1Q8TBY8 1022 aa7.5□□□□□ -1.21
SMAD4-216ENST00000593223 LRP2BPQ9P2M1 347 aa7.5□□□□□ -1.21
SMAD4-216ENST00000593223 DIS3Q9Y2L1 958 aaKnown RBP7.5□□□□□ -1.21
SMAD4-216ENST00000593223 DNAJC25-GNG10A0A024R161 153 aa7.49□□□□□ -1.21
SMAD4-216ENST00000593223 H0Y8X5 98 aa7.49□□□□□ -1.21
SMAD4-216ENST00000593223 CTSKP43235 329 aa7.49□□□□□ -1.21
SMAD4-216ENST00000593223 IRAK1P51617 712 aa7.49□□□□□ -1.21
SMAD4-216ENST00000593223 ZNF143P52747 638 aaPredicted RBP7.49□□□□□ -1.21
SMAD4-216ENST00000593223 HK2P52789 917 aa7.49□□□□□ -1.21
SMAD4-216ENST00000593223 TEKQ02763 1124 aa7.49□□□□□ -1.21
SMAD4-216ENST00000593223 SV2CQ496J9 727 aa7.49□□□□□ -1.21
SMAD4-216ENST00000593223 RALGPS1Q5JS13 557 aa7.49□□□□□ -1.21
SMAD4-216ENST00000593223 EEPD1Q7L9B9 569 aa7.49□□□□□ -1.21
SMAD4-216ENST00000593223 LRRN4CLQ8ND94 238 aa7.49□□□□□ -1.21
SMAD4-216ENST00000593223 CDADC1Q9BWV3 514 aa7.49□□□□□ -1.21
SMAD4-216ENST00000593223 ZMYM5Q9UJ78 669 aa7.49□□□□□ -1.21
SMAD4-216ENST00000593223 KRTAP4-8A0A0G2JLE6 195 aa7.48□□□□□ -1.21
SMAD4-216ENST00000593223 CCDC85CA6NKD9 419 aa7.48□□□□□ -1.21
SMAD4-216ENST00000593223 NOP56O00567 594 aaKnown RBP7.48□□□□□ -1.21
SMAD4-216ENST00000593223 SUSD5O60279 629 aa7.48□□□□□ -1.21
SMAD4-216ENST00000593223 VAV1P15498 845 aa7.48□□□□□ -1.21
SMAD4-216ENST00000593223 BMP8BP34820 402 aa7.48□□□□□ -1.21
SMAD4-216ENST00000593223 POU4F1Q01851 419 aa7.48□□□□□ -1.21
SMAD4-216ENST00000593223 SOGA3Q5TF21 947 aa7.48□□□□□ -1.21
SMAD4-216ENST00000593223 NBPF6Q5VWK0 638 aa7.48□□□□□ -1.21
SMAD4-216ENST00000593223 NBPF4Q96M43 638 aa7.48□□□□□ -1.21
SMAD4-216ENST00000593223 DNAJC2Q99543 621 aaKnown RBP7.48□□□□□ -1.21
SMAD4-216ENST00000593223 ADAMTS10Q9H324 1103 aa7.48□□□□□ -1.21
SMAD4-216ENST00000593223 APEX2Q9UBZ4 518 aa7.48□□□□□ -1.21
SMAD4-216ENST00000593223 SUSD2Q9UGT4 822 aa7.48□□□□□ -1.21
SMAD4-216ENST00000593223 TMEM59LQ9UK28 342 aa7.48□□□□□ -1.21
SMAD4-216ENST00000593223 AKT3Q9Y243 479 aa7.48□□□□□ -1.21
SMAD4-216ENST00000593223 CD3EP07766 207 aa7.47□□□□□ -1.21
SMAD4-216ENST00000593223 ENDOUP21128 410 aaKnown RBP7.47□□□□□ -1.21
SMAD4-216ENST00000593223 NOP2P46087 812 aaKnown RBP7.47□□□□□ -1.21
SMAD4-216ENST00000593223 DUSP4Q13115 394 aa7.47□□□□□ -1.21
SMAD4-216ENST00000593223 MRM1Q6IN84 353 aaKnown RBP7.47□□□□□ -1.21
SMAD4-216ENST00000593223 CRACR2BQ8N4Y2 399 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-216ENST00000593223 BVESQ8NE79 360 aa7.47□□□□□ -1.21
SMAD4-216ENST00000593223 CGGBP1Q9UFW8 167 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-216ENST00000593223 ADGRE2Q9UHX3 823 aa7.47□□□□□ -1.21
SMAD4-216ENST00000593223 AGRPO00253 132 aa7.46□□□□□ -1.22
SMAD4-216ENST00000593223 GSTM1P09488 218 aa7.46□□□□□ -1.22
SMAD4-216ENST00000593223 RAC2P15153 192 aa7.46□□□□□ -1.22
SMAD4-216ENST00000593223 RBL2Q08999 1139 aa7.46□□□□□ -1.22
SMAD4-216ENST00000593223 DPY19L1Q2PZI1 675 aa7.46□□□□□ -1.22
SMAD4-216ENST00000593223 POMZP3Q6PJE2 187 aa7.46□□□□□ -1.22
SMAD4-216ENST00000593223 NAT16Q8N8M0 369 aa7.46□□□□□ -1.22
SMAD4-216ENST00000593223 RCC1LQ96I51 464 aaKnown RBP7.46□□□□□ -1.22
SMAD4-216ENST00000593223 SIRPGQ9P1W8 387 aa7.46□□□□□ -1.22
SMAD4-216ENST00000593223 BIN1O00499 593 aa7.45□□□□□ -1.22
SMAD4-216ENST00000593223 VAMP4O75379 141 aa7.45□□□□□ -1.22
SMAD4-216ENST00000593223 ZNF205O95201 554 aa7.45□□□□□ -1.22
SMAD4-216ENST00000593223 KCNH1O95259 989 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms