RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 SLC23A3Q6PIS1 610 aa6.83□□□□□ -1.32
NF1-220ENST00000581113 CRTC3Q6UUV7 619 aa6.83□□□□□ -1.32
NF1-220ENST00000581113 USHBP1Q8N6Y0 703 aa6.83□□□□□ -1.32
NF1-220ENST00000581113 PMFBP1Q8TBY8 1022 aa6.83□□□□□ -1.32
NF1-220ENST00000581113 APBA2Q99767 749 aa6.83□□□□□ -1.32
NF1-220ENST00000581113 FOXP3Q9BZS1 431 aa6.83□□□□□ -1.32
NF1-220ENST00000581113 SLAMF8Q9P0V8 285 aa6.83□□□□□ -1.32
NF1-220ENST00000581113 SUSD2Q9UGT4 822 aa6.83□□□□□ -1.32
NF1-220ENST00000581113 ADAMTS6Q9UKP5 1117 aa6.83□□□□□ -1.32
NF1-220ENST00000581113 TCFL5Q9UL49 500 aa6.83□□□□□ -1.32
NF1-220ENST00000581113 FKTNO75072 461 aa6.82□□□□□ -1.32
NF1-220ENST00000581113 SYPP08247 313 aa6.82□□□□□ -1.32
NF1-220ENST00000581113 NAT2P11245 290 aa6.82□□□□□ -1.32
NF1-220ENST00000581113 ZNF792Q3KQV3 632 aa6.82□□□□□ -1.32
NF1-220ENST00000581113 MRM1Q6IN84 353 aaKnown RBP6.82□□□□□ -1.32
NF1-220ENST00000581113 EEPD1Q7L9B9 569 aa6.82□□□□□ -1.32
NF1-220ENST00000581113 SYTL4Q96C24 671 aaPredicted RBP6.82□□□□□ -1.32
NF1-220ENST00000581113 ZDHHC15Q96MV8 337 aa6.82□□□□□ -1.32
NF1-220ENST00000581113 APEX2Q9UBZ4 518 aa6.82□□□□□ -1.32
NF1-220ENST00000581113 CCDC85CA6NKD9 419 aa6.81□□□□□ -1.32
NF1-220ENST00000581113 H0Y8X5 98 aa6.81□□□□□ -1.32
NF1-220ENST00000581113 SUSD5O60279 629 aa6.81□□□□□ -1.32
NF1-220ENST00000581113 RNASE1P07998 156 aaKnown RBP6.81□□□□□ -1.32
NF1-220ENST00000581113 RPL10P27635 214 aaKnown RBP6.81□□□□□ -1.32
NF1-220ENST00000581113 RBL2Q08999 1139 aa6.81□□□□□ -1.32
NF1-220ENST00000581113 NBPF6Q5VWK0 638 aa6.81□□□□□ -1.32
NF1-220ENST00000581113 RNF111Q6ZNA4 994 aa6.81□□□□□ -1.32
NF1-220ENST00000581113 LINC00116Q8NCU8 138 aa6.81□□□□□ -1.32
NF1-220ENST00000581113 NBPF4Q96M43 638 aa6.81□□□□□ -1.32
NF1-220ENST00000581113 ALPK1Q96QP1 1244 aa6.81□□□□□ -1.32
NF1-220ENST00000581113 MBNL3Q9NUK0 354 aaKnown RBP6.81□□□□□ -1.32
NF1-220ENST00000581113 SF3B6Q9Y3B4 125 aaKnown RBP6.81□□□□□ -1.32
NF1-220ENST00000581113 DNAJC25-GNG10A0A024R161 153 aa6.8□□□□□ -1.32
NF1-220ENST00000581113 A0A087WZG4 1122 aa6.8□□□□□ -1.32
NF1-220ENST00000581113 GSNP06396 782 aa6.8□□□□□ -1.32
NF1-220ENST00000581113 BMP8BP34820 402 aa6.8□□□□□ -1.32
NF1-220ENST00000581113 ZNF143P52747 638 aaPredicted RBP6.8□□□□□ -1.32
NF1-220ENST00000581113 TEKQ02763 1124 aa6.8□□□□□ -1.32
NF1-220ENST00000581113 SV2CQ496J9 727 aa6.8□□□□□ -1.32
NF1-220ENST00000581113 RALGPS1Q5JS13 557 aa6.8□□□□□ -1.32
NF1-220ENST00000581113 UBXN4Q92575 508 aa6.8□□□□□ -1.32
NF1-220ENST00000581113 RC3H2Q9HBD1 1191 aaKnown RBP6.8□□□□□ -1.32
NF1-220ENST00000581113 CGGBP1Q9UFW8 167 aaPredicted RBP6.8□□□□□ -1.32
NF1-220ENST00000581113 DIS3Q9Y2L1 958 aaKnown RBP6.8□□□□□ -1.32
NF1-220ENST00000581113 SOGA3Q5TF21 947 aa6.79□□□□□ -1.32
NF1-220ENST00000581113 WAPLQ7Z5K2 1190 aa6.79□□□□□ -1.32
NF1-220ENST00000581113 CDADC1Q9BWV3 514 aa6.79□□□□□ -1.32
NF1-220ENST00000581113 ADAMTS10Q9H324 1103 aa6.79□□□□□ -1.32
NF1-220ENST00000581113 LRP2BPQ9P2M1 347 aa6.79□□□□□ -1.32
NF1-220ENST00000581113 AKT3Q9Y243 479 aa6.79□□□□□ -1.32
NF1-220ENST00000581113 VAV1P15498 845 aa6.79□□□□□ -1.32
NF1-220ENST00000581113 HK2P52789 917 aa6.79□□□□□ -1.32
NF1-220ENST00000581113 POU4F1Q01851 419 aa6.79□□□□□ -1.32
NF1-220ENST00000581113 LRRN4CLQ8ND94 238 aa6.79□□□□□ -1.32
NF1-220ENST00000581113 BVESQ8NE79 360 aa6.79□□□□□ -1.32
NF1-220ENST00000581113 RCC1LQ96I51 464 aaKnown RBP6.79□□□□□ -1.32
NF1-220ENST00000581113 LGR4Q9BXB1 951 aa6.79□□□□□ -1.32
NF1-220ENST00000581113 SIRPGQ9P1W8 387 aa6.79□□□□□ -1.32
NF1-220ENST00000581113 USP35Q9P2H5 1018 aa6.79□□□□□ -1.32
NF1-220ENST00000581113 ZMYM5Q9UJ78 669 aa6.79□□□□□ -1.32
NF1-220ENST00000581113 TMEM59LQ9UK28 342 aa6.79□□□□□ -1.32
NF1-220ENST00000581113 NOP56O00567 594 aaKnown RBP6.78□□□□□ -1.32
NF1-220ENST00000581113 VAMP4O75379 141 aa6.78□□□□□ -1.32
NF1-220ENST00000581113 ZNF205O95201 554 aa6.78□□□□□ -1.32
NF1-220ENST00000581113 CD3EP07766 207 aa6.78□□□□□ -1.32
NF1-220ENST00000581113 GSTM1P09488 218 aa6.78□□□□□ -1.32
NF1-220ENST00000581113 ARHGEF39Q8N4T4 335 aa6.78□□□□□ -1.32
NF1-220ENST00000581113 ZNF513Q8N8E2 541 aaPredicted RBP6.78□□□□□ -1.32
NF1-220ENST00000581113 TMEM82A0PJX8 343 aa6.77□□□□□ -1.33
NF1-220ENST00000581113 KCNH1O95259 989 aa6.77□□□□□ -1.33
NF1-220ENST00000581113 NOP2P46087 812 aaKnown RBP6.77□□□□□ -1.33
NF1-220ENST00000581113 DPY19L1Q2PZI1 675 aa6.77□□□□□ -1.33
NF1-220ENST00000581113 SLC10A6Q3KNW5 377 aa6.77□□□□□ -1.33
NF1-220ENST00000581113 POMZP3Q6PJE2 187 aa6.77□□□□□ -1.33
NF1-220ENST00000581113 ZPBP2Q6X784 338 aa6.77□□□□□ -1.33
NF1-220ENST00000581113 CRACR2BQ8N4Y2 399 aaPredicted RBP6.77□□□□□ -1.33
NF1-220ENST00000581113 CCDC120Q96HB5 630 aa6.77□□□□□ -1.33
NF1-220ENST00000581113 SLC12A9Q9BXP2 914 aa6.77□□□□□ -1.33
NF1-220ENST00000581113 AP5S1Q9NUS5 200 aa6.77□□□□□ -1.33
NF1-220ENST00000581113 GPR55Q9Y2T6 319 aaPredicted RBP6.77□□□□□ -1.33
NF1-220ENST00000581113 EMC9Q9Y3B6 208 aa6.77□□□□□ -1.33
NF1-220ENST00000581113 STXBP3O00186 592 aa6.76□□□□□ -1.33
NF1-220ENST00000581113 AGRPO00253 132 aa6.76□□□□□ -1.33
NF1-220ENST00000581113 ZGLP1P0C6A0 271 aa6.76□□□□□ -1.33
NF1-220ENST00000581113 IFNGR1P15260 489 aa6.76□□□□□ -1.33
NF1-220ENST00000581113 AMPD2Q01433 879 aa6.76□□□□□ -1.33
NF1-220ENST00000581113 SERINC3Q13530 473 aa6.76□□□□□ -1.33
NF1-220ENST00000581113 FCRL3Q96P31 734 aaPredicted RBP6.76□□□□□ -1.33
NF1-220ENST00000581113 EPN3Q9H201 632 aa6.76□□□□□ -1.33
NF1-220ENST00000581113 ADGRE2Q9UHX3 823 aa6.76□□□□□ -1.33
NF1-220ENST00000581113 MSRB2Q9Y3D2 182 aa6.76□□□□□ -1.33
NF1-220ENST00000581113 PDPK1O15530 556 aa6.75□□□□□ -1.33
NF1-220ENST00000581113 ITGAVP06756 1048 aa6.75□□□□□ -1.33
NF1-220ENST00000581113 ENDOUP21128 410 aaKnown RBP6.75□□□□□ -1.33
NF1-220ENST00000581113 IRAK1P51617 712 aa6.75□□□□□ -1.33
NF1-220ENST00000581113 DUSP4Q13115 394 aa6.75□□□□□ -1.33
NF1-220ENST00000581113 GRB10Q13322 594 aa6.75□□□□□ -1.33
NF1-220ENST00000581113 RTP2Q5QGT7 225 aa6.75□□□□□ -1.33
NF1-220ENST00000581113 CBLL1Q75N03 491 aa6.75□□□□□ -1.33
NF1-220ENST00000581113 ZNF227Q86WZ6 799 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms