RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 ADCY4Q8NFM4 1077 aa7.85□□□□□ -1.15
SCFD1-211ENST00000554437 PI4K2BQ8TCG2 481 aa7.85□□□□□ -1.15
SCFD1-211ENST00000554437 DNAJC2Q99543 621 aaKnown RBP7.85□□□□□ -1.15
SCFD1-211ENST00000554437 PRDM7Q9NQW5 492 aa7.85□□□□□ -1.15
SCFD1-211ENST00000554437 WHRNQ9P202 907 aa7.85□□□□□ -1.15
SCFD1-211ENST00000554437 PCDHA11Q9Y5I1 949 aa7.85□□□□□ -1.15
SCFD1-211ENST00000554437 PPM1BO75688 479 aa7.84□□□□□ -1.15
SCFD1-211ENST00000554437 NAT2P11245 290 aa7.84□□□□□ -1.15
SCFD1-211ENST00000554437 USHBP1Q8N6Y0 703 aa7.84□□□□□ -1.15
SCFD1-211ENST00000554437 APBA2Q99767 749 aa7.84□□□□□ -1.15
SCFD1-211ENST00000554437 NOL6Q9H6R4 1146 aaKnown RBP7.84□□□□□ -1.15
SCFD1-211ENST00000554437 SUSD2Q9UGT4 822 aa7.84□□□□□ -1.15
SCFD1-211ENST00000554437 SUGT1Q9Y2Z0 365 aa7.84□□□□□ -1.15
SCFD1-211ENST00000554437 FHOD1Q9Y613 1164 aa7.84□□□□□ -1.15
SCFD1-211ENST00000554437 PCBP3P57721 371 aaKnown RBP7.83□□□□□ -1.16
SCFD1-211ENST00000554437 PPP2R5DQ14738 602 aa7.83□□□□□ -1.16
SCFD1-211ENST00000554437 NBPF6Q5VWK0 638 aa7.83□□□□□ -1.16
SCFD1-211ENST00000554437 SLC23A3Q6PIS1 610 aa7.83□□□□□ -1.16
SCFD1-211ENST00000554437 ABI1Q8IZP0 508 aa7.83□□□□□ -1.16
SCFD1-211ENST00000554437 FIBCD1Q8N539 461 aa7.83□□□□□ -1.16
SCFD1-211ENST00000554437 PMFBP1Q8TBY8 1022 aa7.83□□□□□ -1.16
SCFD1-211ENST00000554437 PPP1R14AQ96A00 147 aa7.83□□□□□ -1.16
SCFD1-211ENST00000554437 NBPF4Q96M43 638 aa7.83□□□□□ -1.16
SCFD1-211ENST00000554437 FOXP3Q9BZS1 431 aa7.83□□□□□ -1.16
SCFD1-211ENST00000554437 A0A087WZG4 1122 aa7.82□□□□□ -1.16
SCFD1-211ENST00000554437 GSNP06396 782 aa7.82□□□□□ -1.16
SCFD1-211ENST00000554437 SYPP08247 313 aa7.82□□□□□ -1.16
SCFD1-211ENST00000554437 ZNF143P52747 638 aaPredicted RBP7.82□□□□□ -1.16
SCFD1-211ENST00000554437 SOGA3Q5TF21 947 aa7.82□□□□□ -1.16
SCFD1-211ENST00000554437 CWF19L1Q69YN2 538 aaKnown RBP7.82□□□□□ -1.16
SCFD1-211ENST00000554437 MRM1Q6IN84 353 aaKnown RBP7.82□□□□□ -1.16
SCFD1-211ENST00000554437 CRTC3Q6UUV7 619 aa7.82□□□□□ -1.16
SCFD1-211ENST00000554437 RNF111Q6ZNA4 994 aa7.82□□□□□ -1.16
SCFD1-211ENST00000554437 UBXN4Q92575 508 aa7.82□□□□□ -1.16
SCFD1-211ENST00000554437 SYTL4Q96C24 671 aaPredicted RBP7.82□□□□□ -1.16
SCFD1-211ENST00000554437 ZDHHC15Q96MV8 337 aa7.82□□□□□ -1.16
SCFD1-211ENST00000554437 SLAMF8Q9P0V8 285 aa7.82□□□□□ -1.16
SCFD1-211ENST00000554437 TCFL5Q9UL49 500 aa7.82□□□□□ -1.16
SCFD1-211ENST00000554437 DIS3Q9Y2L1 958 aaKnown RBP7.82□□□□□ -1.16
SCFD1-211ENST00000554437 SF3B6Q9Y3B4 125 aaKnown RBP7.82□□□□□ -1.16
SCFD1-211ENST00000554437 OAS3Q9Y6K5 1087 aaKnown RBP7.82□□□□□ -1.16
SCFD1-211ENST00000554437 H0Y8X5 98 aa7.81□□□□□ -1.16
SCFD1-211ENST00000554437 SUSD5O60279 629 aa7.81□□□□□ -1.16
SCFD1-211ENST00000554437 CTSKP43235 329 aa7.81□□□□□ -1.16
SCFD1-211ENST00000554437 ZNF792Q3KQV3 632 aa7.81□□□□□ -1.16
SCFD1-211ENST00000554437 EEPD1Q7L9B9 569 aa7.81□□□□□ -1.16
SCFD1-211ENST00000554437 LINC00116Q8NCU8 138 aa7.81□□□□□ -1.16
SCFD1-211ENST00000554437 MBNL3Q9NUK0 354 aaKnown RBP7.81□□□□□ -1.16
SCFD1-211ENST00000554437 SIRPGQ9P1W8 387 aa7.81□□□□□ -1.16
SCFD1-211ENST00000554437 APEX2Q9UBZ4 518 aa7.81□□□□□ -1.16
SCFD1-211ENST00000554437 FKTNO75072 461 aa7.8□□□□□ -1.16
SCFD1-211ENST00000554437 RPL10P27635 214 aaKnown RBP7.8□□□□□ -1.16
SCFD1-211ENST00000554437 TEKQ02763 1124 aa7.8□□□□□ -1.16
SCFD1-211ENST00000554437 SV2CQ496J9 727 aa7.8□□□□□ -1.16
SCFD1-211ENST00000554437 ALPK1Q96QP1 1244 aa7.8□□□□□ -1.16
SCFD1-211ENST00000554437 ADAMTS6Q9UKP5 1117 aa7.8□□□□□ -1.16
SCFD1-211ENST00000554437 CCDC85CA6NKD9 419 aa7.79□□□□□ -1.16
SCFD1-211ENST00000554437 RNASE1P07998 156 aaKnown RBP7.79□□□□□ -1.16
SCFD1-211ENST00000554437 VAV1P15498 845 aa7.79□□□□□ -1.16
SCFD1-211ENST00000554437 BMP8BP34820 402 aa7.79□□□□□ -1.16
SCFD1-211ENST00000554437 RCC1LQ96I51 464 aaKnown RBP7.79□□□□□ -1.16
SCFD1-211ENST00000554437 ADAMTS10Q9H324 1103 aa7.79□□□□□ -1.16
SCFD1-211ENST00000554437 RC3H2Q9HBD1 1191 aaKnown RBP7.79□□□□□ -1.16
SCFD1-211ENST00000554437 USP35Q9P2H5 1018 aa7.79□□□□□ -1.16
SCFD1-211ENST00000554437 LRP2BPQ9P2M1 347 aa7.79□□□□□ -1.16
SCFD1-211ENST00000554437 CGGBP1Q9UFW8 167 aaPredicted RBP7.79□□□□□ -1.16
SCFD1-211ENST00000554437 AKT3Q9Y243 479 aa7.79□□□□□ -1.16
SCFD1-211ENST00000554437 DNAJC25-GNG10A0A024R161 153 aa7.78□□□□□ -1.16
SCFD1-211ENST00000554437 NOP56O00567 594 aaKnown RBP7.78□□□□□ -1.16
SCFD1-211ENST00000554437 POU4F1Q01851 419 aa7.78□□□□□ -1.16
SCFD1-211ENST00000554437 RALGPS1Q5JS13 557 aa7.78□□□□□ -1.16
SCFD1-211ENST00000554437 WAPLQ7Z5K2 1190 aa7.78□□□□□ -1.16
SCFD1-211ENST00000554437 ARHGEF39Q8N4T4 335 aa7.78□□□□□ -1.16
SCFD1-211ENST00000554437 ZNF513Q8N8E2 541 aaPredicted RBP7.78□□□□□ -1.16
SCFD1-211ENST00000554437 LRRN4CLQ8ND94 238 aa7.78□□□□□ -1.16
SCFD1-211ENST00000554437 BVESQ8NE79 360 aa7.78□□□□□ -1.16
SCFD1-211ENST00000554437 VAMP4O75379 141 aa7.77□□□□□ -1.17
SCFD1-211ENST00000554437 CD3EP07766 207 aa7.77□□□□□ -1.17
SCFD1-211ENST00000554437 NOP2P46087 812 aaKnown RBP7.77□□□□□ -1.17
SCFD1-211ENST00000554437 SERINC3Q13530 473 aa7.77□□□□□ -1.17
SCFD1-211ENST00000554437 MCTP1Q6DN14 999 aa7.77□□□□□ -1.17
SCFD1-211ENST00000554437 ZPBP2Q6X784 338 aa7.77□□□□□ -1.17
SCFD1-211ENST00000554437 CRACR2BQ8N4Y2 399 aaPredicted RBP7.77□□□□□ -1.17
SCFD1-211ENST00000554437 CCDC120Q96HB5 630 aa7.77□□□□□ -1.17
SCFD1-211ENST00000554437 CDADC1Q9BWV3 514 aa7.77□□□□□ -1.17
SCFD1-211ENST00000554437 ZMYM5Q9UJ78 669 aa7.77□□□□□ -1.17
SCFD1-211ENST00000554437 TMEM59LQ9UK28 342 aa7.77□□□□□ -1.17
SCFD1-211ENST00000554437 ZNF205O95201 554 aa7.76□□□□□ -1.17
SCFD1-211ENST00000554437 KCNH1O95259 989 aa7.76□□□□□ -1.17
SCFD1-211ENST00000554437 GSTM1P09488 218 aa7.76□□□□□ -1.17
SCFD1-211ENST00000554437 HK2P52789 917 aa7.76□□□□□ -1.17
SCFD1-211ENST00000554437 AMPD2Q01433 879 aa7.76□□□□□ -1.17
SCFD1-211ENST00000554437 SLC10A6Q3KNW5 377 aa7.76□□□□□ -1.17
SCFD1-211ENST00000554437 POMZP3Q6PJE2 187 aa7.76□□□□□ -1.17
SCFD1-211ENST00000554437 LGR4Q9BXB1 951 aa7.76□□□□□ -1.17
SCFD1-211ENST00000554437 SLC12A9Q9BXP2 914 aa7.76□□□□□ -1.17
SCFD1-211ENST00000554437 EPN3Q9H201 632 aa7.76□□□□□ -1.17
SCFD1-211ENST00000554437 AP5S1Q9NUS5 200 aa7.76□□□□□ -1.17
SCFD1-211ENST00000554437 EMC9Q9Y3B6 208 aa7.76□□□□□ -1.17
SCFD1-211ENST00000554437 MSRB2Q9Y3D2 182 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms