RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 MYBL2P10244 700 aa15.43■□□□□ 0.06
HDAC7-228ENST00000548938 FUT2Q10981 343 aa15.43■□□□□ 0.06
HDAC7-228ENST00000548938 NPY5RQ15761 445 aa15.43■□□□□ 0.06
HDAC7-228ENST00000548938 SKIDA1Q1XH10 827 aa15.43■□□□□ 0.06
HDAC7-228ENST00000548938 CCDC122Q5T0U0 273 aa15.43■□□□□ 0.06
HDAC7-228ENST00000548938 HAUS4Q9H6D7 363 aa15.43■□□□□ 0.06
HDAC7-228ENST00000548938 TRIM49BA6NDI0 452 aa15.43■□□□□ 0.06
HDAC7-228ENST00000548938 BMP15O95972 392 aa15.43■□□□□ 0.06
HDAC7-228ENST00000548938 ATP2C1P98194 919 aaPredicted RBP15.43■□□□□ 0.06
HDAC7-228ENST00000548938 PPARAQ07869 468 aa15.43■□□□□ 0.06
HDAC7-228ENST00000548938 STIM1Q13586 685 aa15.43■□□□□ 0.06
HDAC7-228ENST00000548938 VPS72Q15906 364 aa15.43■□□□□ 0.06
HDAC7-228ENST00000548938 MAP9Q49MG5 647 aa15.43■□□□□ 0.06
HDAC7-228ENST00000548938 IRF2BP1Q8IU81 584 aa15.43■□□□□ 0.06
HDAC7-228ENST00000548938 TNFRSF25Q93038 417 aa15.43■□□□□ 0.06
HDAC7-228ENST00000548938 MINDY4BA8MYZ0 360 aa15.42■□□□□ 0.06
HDAC7-228ENST00000548938 KCNQ2O43526 872 aa15.42■□□□□ 0.06
HDAC7-228ENST00000548938 GTPBP6O43824 516 aaPredicted RBP15.42■□□□□ 0.06
HDAC7-228ENST00000548938 GGCXP38435 758 aa15.42■□□□□ 0.06
HDAC7-228ENST00000548938 CTR9Q6PD62 1173 aa15.42■□□□□ 0.06
HDAC7-228ENST00000548938 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.42■□□□□ 0.06
HDAC7-228ENST00000548938 OR8K1Q8NGG5 319 aa15.42■□□□□ 0.06
HDAC7-228ENST00000548938 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.42■□□□□ 0.06
HDAC7-228ENST00000548938 PNPLA7Q6ZV29 1317 aa15.42■□□□□ 0.06
HDAC7-228ENST00000548938 RTL9Q8NET4 1388 aa15.42■□□□□ 0.06
HDAC7-228ENST00000548938 PES1O00541 588 aaKnown RBP15.42■□□□□ 0.06
HDAC7-228ENST00000548938 PARP1P09874 1014 aaKnown RBP15.42■□□□□ 0.06
HDAC7-228ENST00000548938 PRCPP42785 496 aa15.42■□□□□ 0.06
HDAC7-228ENST00000548938 ZNF658Q5TYW1 1059 aaPredicted RBP15.42■□□□□ 0.06
HDAC7-228ENST00000548938 PAPD7Q5XG87 772 aaKnown RBP15.42■□□□□ 0.06
HDAC7-228ENST00000548938 WDR59Q6PJI9 974 aa15.42■□□□□ 0.06
HDAC7-228ENST00000548938 FNBP4Q8N3X1 1017 aaPredicted RBP15.42■□□□□ 0.06
HDAC7-228ENST00000548938 ENAHQ8N8S7 591 aaPredicted RBP15.42■□□□□ 0.06
HDAC7-228ENST00000548938 SMARCC1Q92922 1105 aaPredicted RBP15.42■□□□□ 0.06
HDAC7-228ENST00000548938 MTA3Q9BTC8 594 aa15.42■□□□□ 0.06
HDAC7-228ENST00000548938 RNF41Q9H4P4 317 aaPredicted RBP15.42■□□□□ 0.06
HDAC7-228ENST00000548938 TRMT112Q9UI30 125 aaKnown RBP15.42■□□□□ 0.06
HDAC7-228ENST00000548938 DOCK2Q92608 1830 aa15.42■□□□□ 0.06
HDAC7-228ENST00000548938 IL17AQ16552 155 aa15.41■□□□□ 0.06
HDAC7-228ENST00000548938 ICE2Q659A1 982 aa15.41■□□□□ 0.06
HDAC7-228ENST00000548938 SDR42E1Q8WUS8 393 aa15.41■□□□□ 0.06
HDAC7-228ENST00000548938 PPM1EQ8WY54 764 aa15.41■□□□□ 0.06
HDAC7-228ENST00000548938 JAKMIP2Q96AA8 810 aa15.41■□□□□ 0.06
HDAC7-228ENST00000548938 DNAJC7Q99615 494 aa15.41■□□□□ 0.06
HDAC7-228ENST00000548938 GNL3LQ9NVN8 582 aaKnown RBP15.41■□□□□ 0.06
HDAC7-228ENST00000548938 LUC7L2Q9Y383 392 aaKnown RBP15.41■□□□□ 0.06
HDAC7-228ENST00000548938 LOC102724428A0A0B4J2F2 783 aa15.41■□□□□ 0.06
HDAC7-228ENST00000548938 ZNF185O15231 689 aa15.41■□□□□ 0.06
HDAC7-228ENST00000548938 RPN1P04843 607 aaKnown RBP15.41■□□□□ 0.06
HDAC7-228ENST00000548938 GNAT2P19087 354 aa15.41■□□□□ 0.06
HDAC7-228ENST00000548938 MCM3P25205 808 aa15.41■□□□□ 0.06
HDAC7-228ENST00000548938 ATP6V1AP38606 617 aa15.41■□□□□ 0.06
HDAC7-228ENST00000548938 IL6STP40189 918 aaPredicted RBP15.41■□□□□ 0.06
HDAC7-228ENST00000548938 SIK1P57059 783 aa15.41■□□□□ 0.06
HDAC7-228ENST00000548938 MB21D1Q8N884 522 aa15.41■□□□□ 0.06
HDAC7-228ENST00000548938 SELENOOQ9BVL4 669 aa15.41■□□□□ 0.06
HDAC7-228ENST00000548938 TARSL2A2RTX5 802 aaKnown RBP15.4■□□□□ 0.06
HDAC7-228ENST00000548938 RCCD1A6NED2 376 aa15.4■□□□□ 0.06
HDAC7-228ENST00000548938 LGALS16A8MUM7 142 aa15.4■□□□□ 0.06
HDAC7-228ENST00000548938 AGPSO00116 658 aa15.4■□□□□ 0.06
HDAC7-228ENST00000548938 PDE2AO00408 941 aaPredicted RBP15.4■□□□□ 0.06
HDAC7-228ENST00000548938 PRPF3O43395 683 aaKnown RBP15.4■□□□□ 0.06
HDAC7-228ENST00000548938 SLC5A1P13866 664 aa15.4■□□□□ 0.06
HDAC7-228ENST00000548938 INTS5Q6P9B9 1019 aaKnown RBP15.4■□□□□ 0.06
HDAC7-228ENST00000548938 KIAA1328Q86T90 577 aa15.4■□□□□ 0.06
HDAC7-228ENST00000548938 CRACR2AQ9BSW2 395 aa15.4■□□□□ 0.06
HDAC7-228ENST00000548938 BRMS1Q9HCU9 246 aa15.4■□□□□ 0.06
HDAC7-228ENST00000548938 MYH13Q9UKX3 1938 aa15.4■□□□□ 0.06
HDAC7-228ENST00000548938 MYH3P11055 1940 aa15.4■□□□□ 0.06
HDAC7-228ENST00000548938 PMS1P54277 932 aaKnown RBP15.4■□□□□ 0.06
HDAC7-228ENST00000548938 CAGE1Q8TC20 777 aa15.4■□□□□ 0.06
HDAC7-228ENST00000548938 ESR2Q92731 530 aa15.4■□□□□ 0.06
HDAC7-228ENST00000548938 HINFPQ9BQA5 517 aa15.4■□□□□ 0.06
HDAC7-228ENST00000548938 LACRTQ9GZZ8 138 aa15.4■□□□□ 0.06
HDAC7-228ENST00000548938 MCM7P33993 719 aa15.39■□□□□ 0.05
HDAC7-228ENST00000548938 CKAP4Q07065 602 aaKnown RBP15.39■□□□□ 0.05
HDAC7-228ENST00000548938 ITPK1Q13572 414 aa15.39■□□□□ 0.05
HDAC7-228ENST00000548938 DNAJC21Q5F1R6 531 aaKnown RBP15.39■□□□□ 0.05
HDAC7-228ENST00000548938 PIK3AP1Q6ZUJ8 805 aa15.39■□□□□ 0.05
HDAC7-228ENST00000548938 DZIP3Q86Y13 1208 aaKnown RBP15.39■□□□□ 0.05
HDAC7-228ENST00000548938 BCORQ6W2J9 1755 aa15.39■□□□□ 0.05
HDAC7-228ENST00000548938 MYH2Q9UKX2 1941 aa15.39■□□□□ 0.05
HDAC7-228ENST00000548938 MROH5Q6ZUA9 1318 aa15.39■□□□□ 0.05
HDAC7-228ENST00000548938 ADAMTS3O15072 1205 aa15.39■□□□□ 0.05
HDAC7-228ENST00000548938 PDE8AO60658 829 aa15.39■□□□□ 0.05
HDAC7-228ENST00000548938 EIF5P55010 431 aaKnown RBP15.39■□□□□ 0.05
HDAC7-228ENST00000548938 C2orf54Q08AI8 447 aa15.39■□□□□ 0.05
HDAC7-228ENST00000548938 ADGRA1Q86SQ6 560 aa15.39■□□□□ 0.05
HDAC7-228ENST00000548938 JRKLQ9Y4A0 524 aa15.39■□□□□ 0.05
HDAC7-228ENST00000548938 ARAP2Q8WZ64 1704 aa15.39■□□□□ 0.05
HDAC7-228ENST00000548938 CRKLP46109 303 aaKnown RBP15.38■□□□□ 0.05
HDAC7-228ENST00000548938 GTF2A1P52655 376 aaPredicted RBP15.38■□□□□ 0.05
HDAC7-228ENST00000548938 ZNF507Q8TCN5 953 aa15.38■□□□□ 0.05
HDAC7-228ENST00000548938 ZSCAN10Q96SZ4 725 aaPredicted RBP15.38■□□□□ 0.05
HDAC7-228ENST00000548938 KAT14Q9H8E8 782 aa15.38■□□□□ 0.05
HDAC7-228ENST00000548938 CCDC87Q9NVE4 849 aa15.38■□□□□ 0.05
HDAC7-228ENST00000548938 RMND1Q9NWS8 449 aa15.38■□□□□ 0.05
HDAC7-228ENST00000548938 CAPN11Q9UMQ6 739 aa15.38■□□□□ 0.05
HDAC7-228ENST00000548938 DUSP10Q9Y6W6 482 aa15.38■□□□□ 0.05
HDAC7-228ENST00000548938 LRP5O75197 1615 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms