RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 GAB4Q2WGN9 574 aa7.44□□□□□ -1.22
PFDN4-202ENST00000441080 SLC10A6Q3KNW5 377 aa7.44□□□□□ -1.22
PFDN4-202ENST00000441080 MTERF2Q49AM1 385 aa7.44□□□□□ -1.22
PFDN4-202ENST00000441080 CREG2Q8IUH2 290 aa7.44□□□□□ -1.22
PFDN4-202ENST00000441080 TCTN2Q96GX1 697 aa7.44□□□□□ -1.22
PFDN4-202ENST00000441080 MRFAP1L1Q96HT8 127 aa7.44□□□□□ -1.22
PFDN4-202ENST00000441080 CCDC39Q9UFE4 941 aa7.44□□□□□ -1.22
PFDN4-202ENST00000441080 SF3B6Q9Y3B4 125 aaKnown RBP7.44□□□□□ -1.22
PFDN4-202ENST00000441080 FAM221BA6H8Z2 402 aa7.43□□□□□ -1.22
PFDN4-202ENST00000441080 AGRPO00253 132 aa7.43□□□□□ -1.22
PFDN4-202ENST00000441080 IFRD2Q12894 506 aaPredicted RBP7.43□□□□□ -1.22
PFDN4-202ENST00000441080 LRP8Q14114 963 aa7.43□□□□□ -1.22
PFDN4-202ENST00000441080 CWF19L1Q69YN2 538 aaKnown RBP7.43□□□□□ -1.22
PFDN4-202ENST00000441080 CRTC3Q6UUV7 619 aa7.43□□□□□ -1.22
PFDN4-202ENST00000441080 ZNF574Q6ZN55 896 aaPredicted RBP7.43□□□□□ -1.22
PFDN4-202ENST00000441080 FLCNQ8NFG4 579 aa7.43□□□□□ -1.22
PFDN4-202ENST00000441080 RCC1LQ96I51 464 aaKnown RBP7.43□□□□□ -1.22
PFDN4-202ENST00000441080 ZDHHC15Q96MV8 337 aa7.43□□□□□ -1.22
PFDN4-202ENST00000441080 LRP2BPQ9P2M1 347 aa7.43□□□□□ -1.22
PFDN4-202ENST00000441080 CGGBP1Q9UFW8 167 aaPredicted RBP7.43□□□□□ -1.22
PFDN4-202ENST00000441080 AKT3Q9Y243 479 aa7.43□□□□□ -1.22
PFDN4-202ENST00000441080 DIS3Q9Y2L1 958 aaKnown RBP7.43□□□□□ -1.22
PFDN4-202ENST00000441080 SCO2A0A1W2PP80 73 aa7.42□□□□□ -1.22
PFDN4-202ENST00000441080 H0Y8X5 98 aa7.42□□□□□ -1.22
PFDN4-202ENST00000441080 NOP56O00567 594 aaKnown RBP7.42□□□□□ -1.22
PFDN4-202ENST00000441080 GSNP06396 782 aa7.42□□□□□ -1.22
PFDN4-202ENST00000441080 CD8BP10966 210 aa7.42□□□□□ -1.22
PFDN4-202ENST00000441080 CTSKP43235 329 aa7.42□□□□□ -1.22
PFDN4-202ENST00000441080 ANGEL2Q5VTE6 544 aaKnown RBP7.42□□□□□ -1.22
PFDN4-202ENST00000441080 ARHGEF39Q8N4T4 335 aa7.42□□□□□ -1.22
PFDN4-202ENST00000441080 CRACR2BQ8N4Y2 399 aaPredicted RBP7.42□□□□□ -1.22
PFDN4-202ENST00000441080 ZNF513Q8N8E2 541 aaPredicted RBP7.42□□□□□ -1.22
PFDN4-202ENST00000441080 LRRN4CLQ8ND94 238 aa7.42□□□□□ -1.22
PFDN4-202ENST00000441080 BVESQ8NE79 360 aa7.42□□□□□ -1.22
PFDN4-202ENST00000441080 PIF1Q9H611 641 aa7.42□□□□□ -1.22
PFDN4-202ENST00000441080 PCDHA11Q9Y5I1 949 aa7.42□□□□□ -1.22
PFDN4-202ENST00000441080 SSU72P8A0A1W2PR75 194 aa7.41□□□□□ -1.22
PFDN4-202ENST00000441080 ESR1P03372 595 aa7.41□□□□□ -1.22
PFDN4-202ENST00000441080 SYPP08247 313 aa7.41□□□□□ -1.22
PFDN4-202ENST00000441080 PCBP3P57721 371 aaKnown RBP7.41□□□□□ -1.22
PFDN4-202ENST00000441080 EGR3Q06889 387 aa7.41□□□□□ -1.22
PFDN4-202ENST00000441080 POMZP3Q6PJE2 187 aa7.41□□□□□ -1.22
PFDN4-202ENST00000441080 SPRED2Q7Z698 418 aa7.41□□□□□ -1.22
PFDN4-202ENST00000441080 ZNF669Q96BR6 464 aaPredicted RBP7.41□□□□□ -1.22
PFDN4-202ENST00000441080 EMC9Q9Y3B6 208 aa7.41□□□□□ -1.22
PFDN4-202ENST00000441080 IQCA1LA6NCM1 817 aa7.4□□□□□ -1.22
PFDN4-202ENST00000441080 KCNH1O95259 989 aa7.4□□□□□ -1.22
PFDN4-202ENST00000441080 ITGAVP06756 1048 aa7.4□□□□□ -1.22
PFDN4-202ENST00000441080 BMP8BP34820 402 aa7.4□□□□□ -1.22
PFDN4-202ENST00000441080 RNF111Q6ZNA4 994 aa7.4□□□□□ -1.22
PFDN4-202ENST00000441080 SPATC1Q76KD6 591 aa7.4□□□□□ -1.22
PFDN4-202ENST00000441080 ZNF227Q86WZ6 799 aa7.4□□□□□ -1.22
PFDN4-202ENST00000441080 WFDC3Q8IUB2 231 aa7.4□□□□□ -1.22
PFDN4-202ENST00000441080 USHBP1Q8N6Y0 703 aa7.4□□□□□ -1.22
PFDN4-202ENST00000441080 LINC00116Q8NCU8 138 aa7.4□□□□□ -1.22
PFDN4-202ENST00000441080 LGR4Q9BXB1 951 aa7.4□□□□□ -1.22
PFDN4-202ENST00000441080 FOXP3Q9BZS1 431 aa7.4□□□□□ -1.22
PFDN4-202ENST00000441080 CARS2Q9HA77 564 aaKnown RBP7.4□□□□□ -1.22
PFDN4-202ENST00000441080 PFDN2Q9UHV9 154 aa7.4□□□□□ -1.22
PFDN4-202ENST00000441080 ZMYM5Q9UJ78 669 aa7.4□□□□□ -1.22
PFDN4-202ENST00000441080 TCFL5Q9UL49 500 aa7.4□□□□□ -1.22
PFDN4-202ENST00000441080 HYAL3O43820 417 aaPredicted RBP7.39□□□□□ -1.23
PFDN4-202ENST00000441080 WNT11O96014 354 aa7.39□□□□□ -1.23
PFDN4-202ENST00000441080 AMPD2Q01433 879 aa7.39□□□□□ -1.23
PFDN4-202ENST00000441080 POU4F1Q01851 419 aa7.39□□□□□ -1.23
PFDN4-202ENST00000441080 ZP2Q05996 745 aa7.39□□□□□ -1.23
PFDN4-202ENST00000441080 SSRP1Q08945 709 aaKnown RBP7.39□□□□□ -1.23
PFDN4-202ENST00000441080 GRB10Q13322 594 aa7.39□□□□□ -1.23
PFDN4-202ENST00000441080 TRIM59Q8IWR1 403 aa7.39□□□□□ -1.23
PFDN4-202ENST00000441080 LRRC47Q8N1G4 583 aaKnown RBP7.39□□□□□ -1.23
PFDN4-202ENST00000441080 DNAJC7Q99615 494 aa7.39□□□□□ -1.23
PFDN4-202ENST00000441080 LMCD1Q9NZU5 365 aa7.39□□□□□ -1.23
PFDN4-202ENST00000441080 FKTNO75072 461 aa7.38□□□□□ -1.23
PFDN4-202ENST00000441080 CD3EP07766 207 aa7.38□□□□□ -1.23
PFDN4-202ENST00000441080 VAV1P15498 845 aa7.38□□□□□ -1.23
PFDN4-202ENST00000441080 NFXL1Q6ZNB6 911 aa7.38□□□□□ -1.23
PFDN4-202ENST00000441080 TP53INP2Q8IXH6 220 aa7.38□□□□□ -1.23
PFDN4-202ENST00000441080 SGSM3Q96HU1 749 aa7.38□□□□□ -1.23
PFDN4-202ENST00000441080 MRGPRX3Q96LB0 322 aa7.38□□□□□ -1.23
PFDN4-202ENST00000441080 PAK6Q9NQU5 681 aaPredicted RBP7.38□□□□□ -1.23
PFDN4-202ENST00000441080 KDM2BQ8NHM5 1336 aa7.37□□□□□ -1.23
PFDN4-202ENST00000441080 A0A1W2PQU0 124 aa7.37□□□□□ -1.23
PFDN4-202ENST00000441080 TBX1O43435 398 aa7.37□□□□□ -1.23
PFDN4-202ENST00000441080 DIAPH1O60610 1272 aaKnown RBP7.37□□□□□ -1.23
PFDN4-202ENST00000441080 ADAMTS4O75173 837 aa7.37□□□□□ -1.23
PFDN4-202ENST00000441080 VAMP4O75379 141 aa7.37□□□□□ -1.23
PFDN4-202ENST00000441080 ZNF205O95201 554 aa7.37□□□□□ -1.23
PFDN4-202ENST00000441080 NOP2P46087 812 aaKnown RBP7.37□□□□□ -1.23
PFDN4-202ENST00000441080 TEKQ02763 1124 aa7.37□□□□□ -1.23
PFDN4-202ENST00000441080 DPY19L1Q2PZI1 675 aa7.37□□□□□ -1.23
PFDN4-202ENST00000441080 ARTNQ5T4W7 220 aa7.37□□□□□ -1.23
PFDN4-202ENST00000441080 AGBL5Q8NDL9 886 aa7.37□□□□□ -1.23
PFDN4-202ENST00000441080 BTN2A2Q8WVV5 523 aa7.37□□□□□ -1.23
PFDN4-202ENST00000441080 SYTL4Q96C24 671 aaPredicted RBP7.37□□□□□ -1.23
PFDN4-202ENST00000441080 SPATA9Q9BWV2 254 aa7.37□□□□□ -1.23
PFDN4-202ENST00000441080 CWC22Q9HCG8 908 aaKnown RBP7.37□□□□□ -1.23
PFDN4-202ENST00000441080 GPR55Q9Y2T6 319 aaPredicted RBP7.37□□□□□ -1.23
PFDN4-202ENST00000441080 STXBP3O00186 592 aa7.36□□□□□ -1.23
PFDN4-202ENST00000441080 ENDOUP21128 410 aaKnown RBP7.36□□□□□ -1.23
PFDN4-202ENST00000441080 FUT4P22083 530 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms