RNA–Protein interactions for RNA: ENST00000588731.6

SUGP1-209, Transcript of SURP and G-patch domain containing 1, humanhuman

TSL 1 (best)

Gene SUGP1, Length 2,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-209ENST00000588731 OXER1Q8TDS5 423 aa18.26■□□□□ 0.51
SUGP1-209ENST00000588731 GPKOWQ92917 476 aaPredicted RBP eCLIP18.26■□□□□ 0.51
SUGP1-209ENST00000588731 GLIS2Q9BZE0 524 aaPredicted RBP18.26■□□□□ 0.51
SUGP1-209ENST00000588731 F5H6K3 240 aa18.25■□□□□ 0.51
SUGP1-209ENST00000588731 MMP1P03956 469 aa18.25■□□□□ 0.51
SUGP1-209ENST00000588731 SCG2P13521 617 aa18.25■□□□□ 0.51
SUGP1-209ENST00000588731 KLRC3Q07444 240 aa18.25■□□□□ 0.51
SUGP1-209ENST00000588731 PFKFB3Q16875 520 aaPredicted RBP18.25■□□□□ 0.51
SUGP1-209ENST00000588731 TPRNQ4KMQ1 711 aa18.25■□□□□ 0.51
SUGP1-209ENST00000588731 KIAA1755Q5JYT7 1200 aa18.25■□□□□ 0.51
SUGP1-209ENST00000588731 TYW1BQ6NUM6 668 aa18.25■□□□□ 0.51
SUGP1-209ENST00000588731 SLC16A2P36021 539 aa18.25■□□□□ 0.51
SUGP1-209ENST00000588731 NR5A1Q13285 461 aa18.25■□□□□ 0.51
SUGP1-209ENST00000588731 TRIM29Q14134 588 aa18.25■□□□□ 0.51
SUGP1-209ENST00000588731 NPY5RQ15761 445 aa18.25■□□□□ 0.51
SUGP1-209ENST00000588731 APOBEC3FQ8IUX4 373 aaKnown RBP18.25■□□□□ 0.51
SUGP1-209ENST00000588731 NUP88Q99567 741 aaPredicted RBP18.25■□□□□ 0.51
SUGP1-209ENST00000588731 U2AF2P26368 475 aaKnown RBP eCLIP18.24■□□□□ 0.514e-8■□□□□ 9.8
SUGP1-209ENST00000588731 INPP5BP32019 993 aa18.24■□□□□ 0.51
SUGP1-209ENST00000588731 HOMER1Q86YM7 354 aa18.24■□□□□ 0.51
SUGP1-209ENST00000588731 DIS3L2Q8IYB7 885 aaKnown RBP18.24■□□□□ 0.51
SUGP1-209ENST00000588731 SPICE1Q8N0Z3 855 aa18.24■□□□□ 0.51
SUGP1-209ENST00000588731 L3MBTL3Q96JM7 780 aaPredicted RBP18.24■□□□□ 0.51
SUGP1-209ENST00000588731 USP28Q96RU2 1077 aa18.24■□□□□ 0.51
SUGP1-209ENST00000588731 SPZ1Q9BXG8 430 aa18.24■□□□□ 0.51
SUGP1-209ENST00000588731 GLTPD2A6NH11 291 aa18.24■□□□□ 0.51
SUGP1-209ENST00000588731 KRT85P78386 507 aa18.24■□□□□ 0.51
SUGP1-209ENST00000588731 SLFN13Q68D06 897 aa18.24■□□□□ 0.51
SUGP1-209ENST00000588731 GPT2Q8TD30 523 aa18.24■□□□□ 0.51
SUGP1-209ENST00000588731 NDUFB10O96000 172 aa18.23■□□□□ 0.51
SUGP1-209ENST00000588731 ASPRV1Q53RT3 343 aa18.23■□□□□ 0.51
SUGP1-209ENST00000588731 PIGSQ96S52 555 aa18.23■□□□□ 0.51
SUGP1-209ENST00000588731 LZTS2Q9BRK4 669 aa18.23■□□□□ 0.51
SUGP1-209ENST00000588731 PHF20Q9BVI0 1012 aa18.23■□□□□ 0.51
SUGP1-209ENST00000588731 RIOX1Q9H6W3 641 aa18.23■□□□□ 0.51
SUGP1-209ENST00000588731 POTECB2RU33 542 aa18.23■□□□□ 0.51
SUGP1-209ENST00000588731 SLC1A4P43007 532 aa18.23■□□□□ 0.51
SUGP1-209ENST00000588731 CCDC96Q2M329 555 aa18.23■□□□□ 0.51
SUGP1-209ENST00000588731 PPP4R3BQ5MIZ7 849 aa18.23■□□□□ 0.51
SUGP1-209ENST00000588731 TMEM87AQ8NBN3 555 aa18.23■□□□□ 0.51
SUGP1-209ENST00000588731 RGS22Q8NE09 1264 aa18.23■□□□□ 0.51
SUGP1-209ENST00000588731 MYSM1Q5VVJ2 828 aa18.22■□□□□ 0.51
SUGP1-209ENST00000588731 WWC2Q6AWC2 1192 aa18.22■□□□□ 0.51
SUGP1-209ENST00000588731 DDX49Q9Y6V7 483 aaKnown RBP18.22■□□□□ 0.51
SUGP1-209ENST00000588731 ASNSP08243 561 aa18.21■□□□□ 0.51
SUGP1-209ENST00000588731 NOM1Q5C9Z4 860 aaKnown RBP18.21■□□□□ 0.51
SUGP1-209ENST00000588731 EARS2Q5JPH6 523 aaKnown RBP18.21■□□□□ 0.51
SUGP1-209ENST00000588731 ADGRF4Q8IZF3 695 aa18.21■□□□□ 0.51
SUGP1-209ENST00000588731 GMCL1P1Q8NEA9 526 aa18.21■□□□□ 0.51
SUGP1-209ENST00000588731 LEO1Q8WVC0 666 aaPredicted RBP18.21■□□□□ 0.51
SUGP1-209ENST00000588731 ZKSCAN4Q969J2 545 aaPredicted RBP18.21■□□□□ 0.51
SUGP1-209ENST00000588731 JMJD4Q9H9V9 463 aa18.21■□□□□ 0.51
SUGP1-209ENST00000588731 ISY1Q9ULR0 285 aaKnown RBP18.21■□□□□ 0.51
SUGP1-209ENST00000588731 TMX2Q9Y320 296 aa18.21■□□□□ 0.51
SUGP1-209ENST00000588731 ADM5C9JUS6 153 aa18.21■□□□□ 0.51
SUGP1-209ENST00000588731 EPHX2P34913 555 aa18.21■□□□□ 0.51
SUGP1-209ENST00000588731 ZYXQ15942 572 aaKnown RBP18.21■□□□□ 0.51
SUGP1-209ENST00000588731 HEATR3Q7Z4Q2 680 aa18.21■□□□□ 0.51
SUGP1-209ENST00000588731 BRAPQ7Z569 592 aa18.21■□□□□ 0.51
SUGP1-209ENST00000588731 GZF1Q9H116 711 aaPredicted RBP18.21■□□□□ 0.51
SUGP1-209ENST00000588731 FAM205CA6NFA0 338 aa18.2■□□□□ 0.5
SUGP1-209ENST00000588731 SMARCA1P28370 1054 aa18.2■□□□□ 0.5
SUGP1-209ENST00000588731 PRKG1Q13976 671 aa18.2■□□□□ 0.5
SUGP1-209ENST00000588731 GPATCH4Q5T3I0 446 aaKnown RBP18.2■□□□□ 0.5
SUGP1-209ENST00000588731 NOSTRINQ8IVI9 506 aa18.2■□□□□ 0.5
SUGP1-209ENST00000588731 CLIC4Q9Y696 253 aa18.2■□□□□ 0.5
SUGP1-209ENST00000588731 SSC5DA1L4H1 1573 aa18.2■□□□□ 0.5
SUGP1-209ENST00000588731 USP17L10C9JJH3 530 aa18.2■□□□□ 0.5
SUGP1-209ENST00000588731 CTNND1O60716 968 aaKnown RBP18.2■□□□□ 0.5
SUGP1-209ENST00000588731 GNL2Q13823 731 aaKnown RBP18.2■□□□□ 0.5
SUGP1-209ENST00000588731 SPATA32Q96LK8 384 aa18.2■□□□□ 0.5
SUGP1-209ENST00000588731 RBM27Q9P2N5 1060 aaKnown RBP18.2■□□□□ 0.5
SUGP1-209ENST00000588731 XBP1P17861 261 aa18.19■□□□□ 0.5
SUGP1-209ENST00000588731 DGKZQ13574 1117 aa18.19■□□□□ 0.5
SUGP1-209ENST00000588731 SAFBQ15424 915 aaKnown RBP eCLIP18.19■□□□□ 0.5
SUGP1-209ENST00000588731 DCAF4Q8WV16 495 aa18.19■□□□□ 0.5
SUGP1-209ENST00000588731 RRP36Q96EU6 259 aaKnown RBP18.19■□□□□ 0.5
SUGP1-209ENST00000588731 WRNIP1Q96S55 665 aa18.19■□□□□ 0.5
SUGP1-209ENST00000588731 SCAND2PQ9GZW5 306 aaPredicted RBP18.19■□□□□ 0.5
SUGP1-209ENST00000588731 FOXP1Q9H334 677 aaPredicted RBP18.19■□□□□ 0.5
SUGP1-209ENST00000588731 ARHGEF10LQ9HCE6 1279 aa18.19■□□□□ 0.5
SUGP1-209ENST00000588731 BARHL2Q9NY43 387 aa18.19■□□□□ 0.5
SUGP1-209ENST00000588731 PITPNM2Q9BZ72 1349 aa18.19■□□□□ 0.5
SUGP1-209ENST00000588731 STXBP3O00186 592 aa18.19■□□□□ 0.5
SUGP1-209ENST00000588731 PPP1R11O60927 126 aaPredicted RBP18.19■□□□□ 0.5
SUGP1-209ENST00000588731 TOB1P50616 345 aaPredicted RBP18.19■□□□□ 0.5
SUGP1-209ENST00000588731 DCPSQ96C86 337 aaKnown RBP18.19■□□□□ 0.5
SUGP1-209ENST00000588731 GMCL1Q96IK5 515 aa18.19■□□□□ 0.5
SUGP1-209ENST00000588731 ZNF112Q9UJU3 913 aa18.19■□□□□ 0.5
SUGP1-209ENST00000588731 NLRP5P59047 1200 aa18.18■□□□□ 0.5
SUGP1-209ENST00000588731 KLHL40Q2TBA0 621 aa18.18■□□□□ 0.5
SUGP1-209ENST00000588731 KRT26Q7Z3Y9 468 aa18.18■□□□□ 0.5
SUGP1-209ENST00000588731 KLRG1Q96E93 195 aa18.18■□□□□ 0.5
SUGP1-209ENST00000588731 PGBD1Q96JS3 809 aa18.18■□□□□ 0.5
SUGP1-209ENST00000588731 ZNF341Q9BYN7 854 aa18.18■□□□□ 0.5
SUGP1-209ENST00000588731 TAF1DQ9H5J8 278 aaPredicted RBP18.18■□□□□ 0.5
SUGP1-209ENST00000588731 CFAP45Q9UL16 551 aa18.18■□□□□ 0.5
SUGP1-209ENST00000588731 TMEM232C9JQI7 657 aa18.18■□□□□ 0.5
SUGP1-209ENST00000588731 SNAP25P60880 206 aa18.18■□□□□ 0.5
SUGP1-209ENST00000588731 DCAF15Q66K64 600 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms