RNA–Protein interactions for RNA: ENST00000517114.1

SCARNA16.5-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.5-201ENST00000517114 REV1Q9UBZ9 1251 aa1.11□□□□□ -2.23
SCARNA16.5-201ENST00000517114 ZMYM5Q9UJ78 669 aa1.11□□□□□ -2.23
SCARNA16.5-201ENST00000517114 ADAM30Q9UKF2 790 aa1.11□□□□□ -2.23
SCARNA16.5-201ENST00000517114 KCNH3Q9ULD8 1083 aa1.11□□□□□ -2.23
SCARNA16.5-201ENST00000517114 MINPP1Q9UNW1 487 aa1.11□□□□□ -2.23
SCARNA16.5-201ENST00000517114 GNEQ9Y223 722 aaKnown RBP1.11□□□□□ -2.23
SCARNA16.5-201ENST00000517114 GPR55Q9Y2T6 319 aaPredicted RBP1.11□□□□□ -2.23
SCARNA16.5-201ENST00000517114 POLR3KQ9Y2Y1 108 aaPredicted RBP1.11□□□□□ -2.23
SCARNA16.5-201ENST00000517114 GTF3C3Q9Y5Q9 886 aa1.11□□□□□ -2.23
SCARNA16.5-201ENST00000517114 TACC3Q9Y6A5 838 aa1.11□□□□□ -2.23
SCARNA16.5-201ENST00000517114 IVNS1ABPQ9Y6Y0 642 aa1.11□□□□□ -2.23
SCARNA16.5-201ENST00000517114 NUDT19A8MXV4 375 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 MEIS1O00470 390 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 IRS4O14654 1257 aaPredicted RBP1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 N4BP3O15049 544 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 TLR3O15455 904 aaKnown RBP1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 NRDCO43847 1150 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 PRICKLE3O43900 615 aaPredicted RBP1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 CILPO75339 1184 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 PRPF40AO75400 957 aaKnown RBP1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 UBOX5O94941 541 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 HTR3BO95264 441 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 PRAMEF1O95521 474 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 BPNT1O95861 308 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 F13A1P00488 732 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 PF4P02776 101 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 SYPP08247 313 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 ADRB1P08588 477 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 CELA3BP08861 270 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 KRTAP5-9P26371 169 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 POLR2BP30876 1174 aaKnown RBP1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 LIMS1P48059 325 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 YARSP54577 528 aaKnown RBP1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 RTP5Q14D33 572 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 SLC14A2Q15849 920 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 HSF5Q4G112 596 aaPredicted RBP1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 TMEM201Q5SNT2 666 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 CNKSR3Q6P9H4 555 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 DBX2Q6ZNG2 339 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 TMC6Q7Z403 805 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 FAM129CQ86XR2 697 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 SPPL2CQ8IUH8 684 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 IGDCC3Q8IVU1 814 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 TMEM151BQ8IW70 566 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 SP8Q8IXZ3 490 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 SLFN12Q8IYM2 578 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 TMEFF1Q8IYR6 380 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 PHACTR4Q8IZ21 702 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 ADGRG2Q8IZP9 1017 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 TP53I13Q8NBR0 393 aaPredicted RBP1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 FBXO27Q8NI29 283 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 MZB1Q8WU39 189 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 SYTL4Q96C24 671 aaPredicted RBP1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 TCTN2Q96GX1 697 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 MAP6Q96JE9 813 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 ZNF512BQ96KM6 892 aaPredicted RBP1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 FAM161BQ96MY7 647 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 KIF2CQ99661 725 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 HDAC8Q9BY41 377 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 SIRT5Q9NXA8 310 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 TCFL5Q9UL49 500 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 PLA2G2DQ9UNK4 145 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 ZNF281Q9Y2X9 895 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 TAF6LQ9Y6J9 622 aa1.1□□□□□ -2.23
SCARNA16.5-201ENST00000517114 A0A1B0GTL3 188 aa1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 SSU72P8A0A1W2PR75 194 aa1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 ZC3H12DA2A288 527 aaKnown RBP1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 FAM221AA4D161 298 aa1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 FADS2P1A8MWK0 482 aa1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 HRKO00198 91 aa1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 SUPT5HO00267 1087 aaKnown RBP1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 FFAR3O14843 346 aa1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 BRD1O95696 1058 aa1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 PLA2G1BP04054 148 aaKnown RBP1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 CTSHP09668 335 aa1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 MSL3P1P0C860 447 aa1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 INSRRP14616 1297 aa1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 PNLIPP16233 465 aa1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 PRKCAP17252 672 aa1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 CTSKP43235 329 aa1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 KIR2DL1P43626 348 aaPredicted RBP1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 KIR2DL2P43627 348 aaPredicted RBP1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 CEBPAP49715 358 aaPredicted RBP1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 PCBP3P57721 371 aaKnown RBP1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 RTP1P59025 263 aa1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 CHMP4BP1P59074 171 aa1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 ERVFRD-1P60508 538 aa1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 YBX1P67809 324 aaKnown RBP1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 RNF4P78317 190 aa1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 ZNF200P98182 395 aaPredicted RBP1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 EFEMP1Q12805 493 aa1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 PSMD2Q13200 908 aa1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 CAMK2GQ13555 558 aaPredicted RBP1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 PUM1Q14671 1186 aaKnown RBP eCLIP1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 SNX17Q15036 470 aa1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 RAB3GAP1Q15042 981 aa1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 PLEKHN1Q494U1 663 aaPredicted RBP1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 ARSHQ5FYA8 562 aa1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 SNAP47Q5SQN1 464 aa1.09□□□□□ -2.23
SCARNA16.5-201ENST00000517114 OVOS1Q6IE37 1185 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms