RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 KCNJ12Q14500 433 aa20.82■□□□□ 0.92
HPS3-204ENST00000462030 TCP11X2Q5H9J9 407 aa20.82■□□□□ 0.92
HPS3-204ENST00000462030 CARD10Q9BWT7 1032 aa20.82■□□□□ 0.92
HPS3-204ENST00000462030 GBP3Q9H0R5 595 aa20.82■□□□□ 0.92
HPS3-204ENST00000462030 RWDD2AQ9UIY3 292 aa20.82■□□□□ 0.92
HPS3-204ENST00000462030 GUCA1BQ9UMX6 200 aa20.82■□□□□ 0.92
HPS3-204ENST00000462030 MAPK8IP1Q9UQF2 711 aa20.82■□□□□ 0.92
HPS3-204ENST00000462030 ZBTB1Q9Y2K1 713 aa20.82■□□□□ 0.92
HPS3-204ENST00000462030 PRPF3O43395 683 aaKnown RBP20.82■□□□□ 0.92
HPS3-204ENST00000462030 ATP2C1P98194 919 aaPredicted RBP20.82■□□□□ 0.92
HPS3-204ENST00000462030 PDXDC2PQ6P474 469 aa20.82■□□□□ 0.92
HPS3-204ENST00000462030 NELFBQ8WX92 580 aa20.82■□□□□ 0.92
HPS3-204ENST00000462030 ESR2Q92731 530 aa20.82■□□□□ 0.92
HPS3-204ENST00000462030 BMP15O95972 392 aa20.81■□□□□ 0.92
HPS3-204ENST00000462030 FAM71BQ8TC56 605 aa20.81■□□□□ 0.92
HPS3-204ENST00000462030 LRP2BPQ9P2M1 347 aa20.81■□□□□ 0.92
HPS3-204ENST00000462030 HDAC6Q9UBN7 1215 aa20.81■□□□□ 0.92
HPS3-204ENST00000462030 TFR2Q9UP52 801 aa20.81■□□□□ 0.92
HPS3-204ENST00000462030 SLIT2O94813 1529 aa20.81■□□□□ 0.92
HPS3-204ENST00000462030 BAZ2BQ9UIF8 2168 aaKnown RBP20.81■□□□□ 0.92
HPS3-204ENST00000462030 STRCP1A6NGW2 1772 aa20.81■□□□□ 0.92
HPS3-204ENST00000462030 ENC1O14682 589 aa20.81■□□□□ 0.92
HPS3-204ENST00000462030 SLC4A9Q96Q91 983 aa20.81■□□□□ 0.92
HPS3-204ENST00000462030 GDAQ9Y2T3 454 aa20.81■□□□□ 0.92
HPS3-204ENST00000462030 NDUFA10O95299 355 aa20.8■□□□□ 0.92
HPS3-204ENST00000462030 IL17AQ16552 155 aa20.8■□□□□ 0.92
HPS3-204ENST00000462030 HSP90B2PQ58FF3 399 aa20.8■□□□□ 0.92
HPS3-204ENST00000462030 IQSEC3Q9UPP2 1182 aaPredicted RBP20.8■□□□□ 0.92
HPS3-204ENST00000462030 EPN1Q9Y6I3 576 aaPredicted RBP20.8■□□□□ 0.92
HPS3-204ENST00000462030 DCCP43146 1447 aa20.8■□□□□ 0.92
HPS3-204ENST00000462030 CYP2D7A0A087X1C5 515 aa20.8■□□□□ 0.92
HPS3-204ENST00000462030 CYP7A1P22680 504 aa20.8■□□□□ 0.92
HPS3-204ENST00000462030 UBXN1Q04323 297 aa20.8■□□□□ 0.92
HPS3-204ENST00000462030 SPAG1Q07617 926 aa20.8■□□□□ 0.92
HPS3-204ENST00000462030 TRIM14Q14142 442 aa20.8■□□□□ 0.92
HPS3-204ENST00000462030 WDR93Q6P2C0 686 aa20.8■□□□□ 0.92
HPS3-204ENST00000462030 ZSCAN10Q96SZ4 725 aaPredicted RBP20.8■□□□□ 0.92
HPS3-204ENST00000462030 SOS2Q07890 1332 aaPredicted RBP20.8■□□□□ 0.92
HPS3-204ENST00000462030 NHSL1Q5SYE7 1610 aa20.79■□□□□ 0.92
HPS3-204ENST00000462030 GTPBP6O43824 516 aaPredicted RBP20.79■□□□□ 0.92
HPS3-204ENST00000462030 TRAPPC11Q7Z392 1133 aa20.79■□□□□ 0.92
HPS3-204ENST00000462030 BAZ2AQ9UIF9 1905 aaKnown RBP20.79■□□□□ 0.92
HPS3-204ENST00000462030 ADAMTS3O15072 1205 aa20.79■□□□□ 0.92
HPS3-204ENST00000462030 PPP2R5BQ15173 497 aa20.79■□□□□ 0.92
HPS3-204ENST00000462030 IFIT1BQ5T764 474 aaKnown RBP20.79■□□□□ 0.92
HPS3-204ENST00000462030 BRMS1Q9HCU9 246 aa20.79■□□□□ 0.92
HPS3-204ENST00000462030 TTC26A0AVF1 554 aa20.78■□□□□ 0.92
HPS3-204ENST00000462030 TRIM49BA6NDI0 452 aa20.78■□□□□ 0.92
HPS3-204ENST00000462030 IVLP07476 585 aa20.78■□□□□ 0.92
HPS3-204ENST00000462030 CYP19A1P11511 503 aaPredicted RBP20.78■□□□□ 0.92
HPS3-204ENST00000462030 CATIPQ7Z7H3 387 aa20.78■□□□□ 0.92
HPS3-204ENST00000462030 ANKRD20A12PQ8NF67 263 aa20.78■□□□□ 0.92
HPS3-204ENST00000462030 FAM204AQ9H8W3 233 aa20.78■□□□□ 0.92
HPS3-204ENST00000462030 DUOX1Q9NRD9 1551 aa20.78■□□□□ 0.92
HPS3-204ENST00000462030 RPS6KA5O75582 802 aa20.78■□□□□ 0.92
HPS3-204ENST00000462030 PRCPP42785 496 aa20.78■□□□□ 0.92
HPS3-204ENST00000462030 ZNF658Q5TYW1 1059 aaPredicted RBP20.78■□□□□ 0.92
HPS3-204ENST00000462030 PIK3AP1Q6ZUJ8 805 aa20.78■□□□□ 0.92
HPS3-204ENST00000462030 CADPS2Q86UW7 1296 aa20.78■□□□□ 0.92
HPS3-204ENST00000462030 IRF2BP1Q8IU81 584 aa20.78■□□□□ 0.92
HPS3-204ENST00000462030 CCDC148Q8NFR7 591 aa20.78■□□□□ 0.92
HPS3-204ENST00000462030 SRGAP2O75044 1071 aa20.77■□□□□ 0.92
HPS3-204ENST00000462030 ATP1A1P05023 1023 aaKnown RBP20.77■□□□□ 0.92
HPS3-204ENST00000462030 TUBBP07437 444 aa20.77■□□□□ 0.92
HPS3-204ENST00000462030 MCM7P33993 719 aa20.77■□□□□ 0.92
HPS3-204ENST00000462030 TROAPQ12815 778 aa20.77■□□□□ 0.92
HPS3-204ENST00000462030 MMS19Q96T76 1030 aa20.77■□□□□ 0.92
HPS3-204ENST00000462030 RSPH14Q9UHP6 348 aa20.77■□□□□ 0.92
HPS3-204ENST00000462030 ANAPC4Q9UJX5 808 aa20.77■□□□□ 0.92
HPS3-204ENST00000462030 KAT6BQ8WYB5 2073 aa20.77■□□□□ 0.92
HPS3-204ENST00000462030 ITGB4P16144 1822 aa20.77■□□□□ 0.91
HPS3-204ENST00000462030 RPN1P04843 607 aaKnown RBP20.77■□□□□ 0.91
HPS3-204ENST00000462030 USP14P54578 494 aa20.77■□□□□ 0.91
HPS3-204ENST00000462030 HERVK_113P62684 666 aa20.77■□□□□ 0.91
HPS3-204ENST00000462030 CNTNAP5Q8WYK1 1306 aa20.77■□□□□ 0.91
HPS3-204ENST00000462030 DISP2A7MBM2 1401 aa20.76■□□□□ 0.91
HPS3-204ENST00000462030 PSMD14O00487 310 aa20.76■□□□□ 0.91
HPS3-204ENST00000462030 PARP1P09874 1014 aaKnown RBP20.76■□□□□ 0.91
HPS3-204ENST00000462030 DZIP3Q86Y13 1208 aaKnown RBP20.76■□□□□ 0.91
HPS3-204ENST00000462030 MED4Q9NPJ6 270 aa20.76■□□□□ 0.91
HPS3-204ENST00000462030 ABCF2Q9UG63 623 aa20.76■□□□□ 0.91
HPS3-204ENST00000462030 RNF40O75150 1001 aa20.76■□□□□ 0.91
HPS3-204ENST00000462030 LRRC31Q6UY01 552 aa20.76■□□□□ 0.91
HPS3-204ENST00000462030 TMTC3Q6ZXV5 915 aa20.76■□□□□ 0.91
HPS3-204ENST00000462030 RBM28Q9NW13 759 aaKnown RBP20.76■□□□□ 0.91
HPS3-204ENST00000462030 CICQ96RK0 1608 aaPredicted RBP20.75■□□□□ 0.91
HPS3-204ENST00000462030 MAGEB6P1A0A0J9YX57 407 aa20.75■□□□□ 0.91
HPS3-204ENST00000462030 SYF2O95926 243 aaKnown RBP20.75■□□□□ 0.91
HPS3-204ENST00000462030 VEGFAP15692 232 aaPredicted RBP20.75■□□□□ 0.91
HPS3-204ENST00000462030 TNNT3P45378 269 aaPredicted RBP20.75■□□□□ 0.91
HPS3-204ENST00000462030 WDR59Q6PJI9 974 aa20.75■□□□□ 0.91
HPS3-204ENST00000462030 ZNF34Q8IZ26 560 aa20.75■□□□□ 0.91
HPS3-204ENST00000462030 OR8K1Q8NGG5 319 aa20.75■□□□□ 0.91
HPS3-204ENST00000462030 CAPZA3Q96KX2 299 aa20.75■□□□□ 0.91
HPS3-204ENST00000462030 ACBD3Q9H3P7 528 aa20.75■□□□□ 0.91
HPS3-204ENST00000462030 PMS1P54277 932 aaKnown RBP20.75■□□□□ 0.91
HPS3-204ENST00000462030 SRBD1Q8N5C6 995 aaKnown RBP20.75■□□□□ 0.91
HPS3-204ENST00000462030 MB21D1Q8N884 522 aa20.75■□□□□ 0.91
HPS3-204ENST00000462030 HAUS4Q9H6D7 363 aa20.75■□□□□ 0.91
HPS3-204ENST00000462030 PES1O00541 588 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms