RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 MRS2Q9HD23 443 aa7.63□□□□□ -1.19
CUL3-208ENST00000454323 TJP2Q9UDY2 1190 aa7.63□□□□□ -1.19
CUL3-208ENST00000454323 TTF2Q9UNY4 1162 aaKnown RBP7.63□□□□□ -1.19
CUL3-208ENST00000454323 PCDHA11Q9Y5I1 949 aa7.63□□□□□ -1.19
CUL3-208ENST00000454323 ZC3H12DA2A288 527 aaKnown RBP7.62□□□□□ -1.19
CUL3-208ENST00000454323 HMGB1P09429 215 aaKnown RBP7.62□□□□□ -1.19
CUL3-208ENST00000454323 SRSF3P84103 164 aaKnown RBP7.62□□□□□ -1.19
CUL3-208ENST00000454323 PSMD2Q13200 908 aa7.62□□□□□ -1.19
CUL3-208ENST00000454323 SSPNQ14714 243 aa7.62□□□□□ -1.19
CUL3-208ENST00000454323 TIGD5Q53EQ6 642 aa7.62□□□□□ -1.19
CUL3-208ENST00000454323 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.62□□□□□ -1.19
CUL3-208ENST00000454323 CYB5D2Q8WUJ1 264 aa7.62□□□□□ -1.19
CUL3-208ENST00000454323 RNF141Q8WVD5 230 aa7.62□□□□□ -1.19
CUL3-208ENST00000454323 DACT3Q96B18 629 aaPredicted RBP7.62□□□□□ -1.19
CUL3-208ENST00000454323 SGPP1Q9BX95 441 aa7.62□□□□□ -1.19
CUL3-208ENST00000454323 OTOL1A6NHN0 477 aaPredicted RBP7.61□□□□□ -1.19
CUL3-208ENST00000454323 ZXDCQ2QGD7 858 aaPredicted RBP7.61□□□□□ -1.19
CUL3-208ENST00000454323 ADGRF1Q5T601 910 aa7.61□□□□□ -1.19
CUL3-208ENST00000454323 RNF34Q969K3 372 aa7.61□□□□□ -1.19
CUL3-208ENST00000454323 DPH2Q9BQC3 489 aaPredicted RBP7.61□□□□□ -1.19
CUL3-208ENST00000454323 TINF2Q9BSI4 451 aa7.61□□□□□ -1.19
CUL3-208ENST00000454323 OSBPL7Q9BZF2 842 aa7.61□□□□□ -1.19
CUL3-208ENST00000454323 TGIF2Q9GZN2 237 aa7.61□□□□□ -1.19
CUL3-208ENST00000454323 TMPRSS5Q9H3S3 457 aa7.61□□□□□ -1.19
CUL3-208ENST00000454323 LUC7LQ9NQ29 371 aaKnown RBP7.61□□□□□ -1.19
CUL3-208ENST00000454323 CRTAC1Q9NQ79 661 aa7.61□□□□□ -1.19
CUL3-208ENST00000454323 SLC22A31A6NKX4 558 aa7.6□□□□□ -1.19
CUL3-208ENST00000454323 GFRA2O00451 464 aa7.6□□□□□ -1.19
CUL3-208ENST00000454323 N4BP3O15049 544 aa7.6□□□□□ -1.19
CUL3-208ENST00000454323 HSP90B1P14625 803 aaKnown RBP7.6□□□□□ -1.19
CUL3-208ENST00000454323 YARSP54577 528 aaKnown RBP7.6□□□□□ -1.19
CUL3-208ENST00000454323 TMEM62Q0P6H9 643 aa7.6□□□□□ -1.19
CUL3-208ENST00000454323 SLC43A3Q8NBI5 491 aa7.6□□□□□ -1.19
CUL3-208ENST00000454323 ASCC2Q9H1I8 757 aaPredicted RBP7.6□□□□□ -1.19
CUL3-208ENST00000454323 PPP1R1BQ9UD71 204 aaPredicted RBP7.6□□□□□ -1.19
CUL3-208ENST00000454323 VTI1BQ9UEU0 232 aa7.6□□□□□ -1.19
CUL3-208ENST00000454323 MBD1Q9UIS9 605 aaPredicted RBP7.6□□□□□ -1.19
CUL3-208ENST00000454323 WASH4PA8MWX3 477 aa7.59□□□□□ -1.19
CUL3-208ENST00000454323 USP17L7P0C7H9 530 aa7.59□□□□□ -1.19
CUL3-208ENST00000454323 GNA15P30679 374 aa7.59□□□□□ -1.19
CUL3-208ENST00000454323 NFKB2Q00653 900 aa7.59□□□□□ -1.19
CUL3-208ENST00000454323 CLEC16AQ2KHT3 1053 aa7.59□□□□□ -1.19
CUL3-208ENST00000454323 GGNQ86UU5 652 aa7.59□□□□□ -1.19
CUL3-208ENST00000454323 ASPNQ9BXN1 380 aa7.59□□□□□ -1.19
CUL3-208ENST00000454323 MIR1-1HGQ9H1L0 117 aa7.59□□□□□ -1.19
CUL3-208ENST00000454323 CNOT11Q9UKZ1 510 aaKnown RBP7.59□□□□□ -1.19
CUL3-208ENST00000454323 ZNF76P36508 570 aa7.58□□□□□ -1.2
CUL3-208ENST00000454323 SLC14A2Q15849 920 aa7.58□□□□□ -1.2
CUL3-208ENST00000454323 FRMD5Q7Z6J6 570 aa7.58□□□□□ -1.2
CUL3-208ENST00000454323 LINC01599Q8WXQ3 324 aa7.58□□□□□ -1.2
CUL3-208ENST00000454323 PALD1Q9ULE6 856 aa7.58□□□□□ -1.2
CUL3-208ENST00000454323 PSPNO60542 156 aa7.57□□□□□ -1.2
CUL3-208ENST00000454323 KIR2DL1P43626 348 aaPredicted RBP7.57□□□□□ -1.2
CUL3-208ENST00000454323 KIR2DL2P43627 348 aaPredicted RBP7.57□□□□□ -1.2
CUL3-208ENST00000454323 CHMP4BP1P59074 171 aa7.57□□□□□ -1.2
CUL3-208ENST00000454323 TEKQ02763 1124 aa7.57□□□□□ -1.2
CUL3-208ENST00000454323 RNF111Q6ZNA4 994 aa7.57□□□□□ -1.2
CUL3-208ENST00000454323 NLRX1Q86UT6 975 aa7.57□□□□□ -1.2
CUL3-208ENST00000454323 AK5Q9Y6K8 562 aa7.57□□□□□ -1.2
CUL3-208ENST00000454323 CTSHP09668 335 aa7.56□□□□□ -1.2
CUL3-208ENST00000454323 RLBP1P12271 317 aa7.56□□□□□ -1.2
CUL3-208ENST00000454323 CANXP27824 592 aaKnown RBP7.56□□□□□ -1.2
CUL3-208ENST00000454323 EFEMP1Q12805 493 aa7.56□□□□□ -1.2
CUL3-208ENST00000454323 CNKSR3Q6P9H4 555 aa7.56□□□□□ -1.2
CUL3-208ENST00000454323 FEZF2Q8TBJ5 459 aa7.56□□□□□ -1.2
CUL3-208ENST00000454323 ENOX1Q8TC92 643 aaKnown RBP7.56□□□□□ -1.2
CUL3-208ENST00000454323 SHISA4Q96DD7 197 aa7.56□□□□□ -1.2
CUL3-208ENST00000454323 SPATA32Q96LK8 384 aa7.56□□□□□ -1.2
CUL3-208ENST00000454323 CADPSQ9ULU8 1353 aa7.56□□□□□ -1.2
CUL3-208ENST00000454323 TNNI2P48788 182 aa7.55□□□□□ -1.2
CUL3-208ENST00000454323 CDK8P49336 464 aa7.55□□□□□ -1.2
CUL3-208ENST00000454323 RPL6Q02878 288 aaKnown RBP7.55□□□□□ -1.2
CUL3-208ENST00000454323 PLP2Q04941 152 aa7.55□□□□□ -1.2
CUL3-208ENST00000454323 SEPT6Q14141 434 aa7.55□□□□□ -1.2
CUL3-208ENST00000454323 CCDC85BQ15834 202 aaPredicted RBP7.55□□□□□ -1.2
CUL3-208ENST00000454323 FAM13CQ8NE31 585 aa7.55□□□□□ -1.2
CUL3-208ENST00000454323 TANGO6Q9C0B7 1094 aa7.55□□□□□ -1.2
CUL3-208ENST00000454323 CCSER2Q9H7U1 834 aa7.55□□□□□ -1.2
CUL3-208ENST00000454323 IRS4O14654 1257 aaPredicted RBP7.54□□□□□ -1.2
CUL3-208ENST00000454323 NRDCO43847 1150 aa7.54□□□□□ -1.2
CUL3-208ENST00000454323 SMARCA5O60264 1052 aaPredicted RBP7.54□□□□□ -1.2
CUL3-208ENST00000454323 AGMOQ6ZNB7 445 aa7.54□□□□□ -1.2
CUL3-208ENST00000454323 ACSF2Q96CM8 615 aaPredicted RBP7.54□□□□□ -1.2
CUL3-208ENST00000454323 CRELD1Q96HD1 420 aa7.54□□□□□ -1.2
CUL3-208ENST00000454323 GMLQ99445 158 aa7.54□□□□□ -1.2
CUL3-208ENST00000454323 ACBD3Q9H3P7 528 aa7.54□□□□□ -1.2
CUL3-208ENST00000454323 ZMYM5Q9UJ78 669 aa7.54□□□□□ -1.2
CUL3-208ENST00000454323 MYRFQ9Y2G1 1151 aa7.54□□□□□ -1.2
CUL3-208ENST00000454323 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.54□□□□□ -1.2
CUL3-208ENST00000454323 ADAMTS20P59510 1910 aa7.53□□□□□ -1.2
CUL3-208ENST00000454323 CILPO75339 1184 aa7.53□□□□□ -1.2
CUL3-208ENST00000454323 PNLIPP16233 465 aa7.53□□□□□ -1.2
CUL3-208ENST00000454323 ARL4AP40617 200 aa7.53□□□□□ -1.2
CUL3-208ENST00000454323 KRTAP10-2P60368 255 aa7.53□□□□□ -1.2
CUL3-208ENST00000454323 DPH6Q7L8W6 267 aa7.53□□□□□ -1.2
CUL3-208ENST00000454323 NLGN1Q8N2Q7 840 aa7.53□□□□□ -1.2
CUL3-208ENST00000454323 LINC01356Q8N9X3 169 aa7.53□□□□□ -1.2
CUL3-208ENST00000454323 CAPN10Q9HC96 672 aa7.53□□□□□ -1.2
CUL3-208ENST00000454323 SSU72P8A0A1W2PR75 194 aa7.52□□□□□ -1.21
CUL3-208ENST00000454323 ENDOUP21128 410 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms