RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 MICALL1Q8N3F8 863 aa15.92■□□□□ 0.14
LDB3-209ENST00000623056 GDAP1L1Q96MZ0 367 aa15.92■□□□□ 0.14
LDB3-209ENST00000623056 CHP1Q99653 195 aa15.92■□□□□ 0.14
LDB3-209ENST00000623056 PARP4Q9UKK3 1724 aaKnown RBP15.92■□□□□ 0.14
LDB3-209ENST00000623056 TARSL2A2RTX5 802 aaKnown RBP15.91■□□□□ 0.14
LDB3-209ENST00000623056 NDUFA10O95299 355 aa15.91■□□□□ 0.14
LDB3-209ENST00000623056 ATP1A1P05023 1023 aaKnown RBP15.91■□□□□ 0.14
LDB3-209ENST00000623056 CSB-PGBD3P0DP91 1061 aa15.91■□□□□ 0.14
LDB3-209ENST00000623056 TRIM14Q14142 442 aa15.91■□□□□ 0.14
LDB3-209ENST00000623056 CCDC82Q8N4S0 544 aa15.91■□□□□ 0.14
LDB3-209ENST00000623056 CCDC85AQ96PX6 553 aaPredicted RBP15.91■□□□□ 0.14
LDB3-209ENST00000623056 FAM107BQ9H098 131 aa15.91■□□□□ 0.14
LDB3-209ENST00000623056 EPN1Q9Y6I3 576 aaPredicted RBP15.91■□□□□ 0.14
LDB3-209ENST00000623056 PKD1L3Q7Z443 1732 aa15.91■□□□□ 0.14
LDB3-209ENST00000623056 BCL9LQ86UU0 1499 aa15.91■□□□□ 0.14
LDB3-209ENST00000623056 NID2Q14112 1375 aa15.91■□□□□ 0.14
LDB3-209ENST00000623056 LRRC10BA6NIK2 292 aa15.91■□□□□ 0.14
LDB3-209ENST00000623056 COPB1P53618 953 aaKnown RBP15.91■□□□□ 0.14
LDB3-209ENST00000623056 CRACR2AQ9BSW2 395 aa15.91■□□□□ 0.14
LDB3-209ENST00000623056 PIH1D3Q9NQM4 214 aaKnown RBP15.91■□□□□ 0.14
LDB3-209ENST00000623056 TAB2Q9NYJ8 693 aa15.91■□□□□ 0.14
LDB3-209ENST00000623056 FBXO3Q9UK99 471 aa15.91■□□□□ 0.14
LDB3-209ENST00000623056 AGPSO00116 658 aa15.9■□□□□ 0.14
LDB3-209ENST00000623056 EXOC5O00471 708 aa15.9■□□□□ 0.14
LDB3-209ENST00000623056 CYP27B1O15528 508 aa15.9■□□□□ 0.14
LDB3-209ENST00000623056 SRGAP2O75044 1071 aa15.9■□□□□ 0.14
LDB3-209ENST00000623056 ZMYND10O75800 440 aa15.9■□□□□ 0.14
LDB3-209ENST00000623056 DEXIO95424 95 aa15.9■□□□□ 0.14
LDB3-209ENST00000623056 CABP4P57796 275 aa15.9■□□□□ 0.14
LDB3-209ENST00000623056 SART3Q15020 963 aaKnown RBP15.9■□□□□ 0.14
LDB3-209ENST00000623056 RTN1Q16799 776 aa15.9■□□□□ 0.14
LDB3-209ENST00000623056 TAF7LQ5H9L4 462 aa15.9■□□□□ 0.14
LDB3-209ENST00000623056 GSPT2Q8IYD1 628 aaKnown RBP15.9■□□□□ 0.14
LDB3-209ENST00000623056 CMTR1Q8N1G2 835 aaKnown RBP15.9■□□□□ 0.14
LDB3-209ENST00000623056 SYMPKQ92797 1274 aaKnown RBP15.9■□□□□ 0.14
LDB3-209ENST00000623056 NCAPGQ9BPX3 1015 aa15.9■□□□□ 0.14
LDB3-209ENST00000623056 KAT14Q9H8E8 782 aa15.9■□□□□ 0.14
LDB3-209ENST00000623056 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.9■□□□□ 0.14
LDB3-209ENST00000623056 TACC3Q9Y6A5 838 aa15.9■□□□□ 0.14
LDB3-209ENST00000623056 SAR1BQ9Y6B6 198 aa15.9■□□□□ 0.14
LDB3-209ENST00000623056 ZNF532Q9HCE3 1301 aa15.9■□□□□ 0.14
LDB3-209ENST00000623056 LRP6O75581 1613 aa15.9■□□□□ 0.14
LDB3-209ENST00000623056 AKAP11Q9UKA4 1901 aa15.9■□□□□ 0.14
LDB3-209ENST00000623056 IDH1O75874 414 aaKnown RBP15.9■□□□□ 0.14
LDB3-209ENST00000623056 CCT5P48643 541 aa15.9■□□□□ 0.14
LDB3-209ENST00000623056 CTDSPL2Q05D32 466 aa15.9■□□□□ 0.14
LDB3-209ENST00000623056 UBE3CQ15386 1083 aa15.9■□□□□ 0.14
LDB3-209ENST00000623056 FAM76AQ8TAV0 307 aa15.9■□□□□ 0.14
LDB3-209ENST00000623056 CAPZA3Q96KX2 299 aa15.9■□□□□ 0.14
LDB3-209ENST00000623056 FAM205CA6NFA0 338 aa15.89■□□□□ 0.13
LDB3-209ENST00000623056 TRIM75PA6NK02 468 aa15.89■□□□□ 0.13
LDB3-209ENST00000623056 MYBL2P10244 700 aa15.89■□□□□ 0.13
LDB3-209ENST00000623056 PAPD7Q5XG87 772 aaKnown RBP15.89■□□□□ 0.13
LDB3-209ENST00000623056 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.89■□□□□ 0.13
LDB3-209ENST00000623056 CRACR2BQ8N4Y2 399 aaPredicted RBP15.89■□□□□ 0.13
LDB3-209ENST00000623056 SELENOOQ9BVL4 669 aa15.89■□□□□ 0.13
LDB3-209ENST00000623056 HAUS4Q9H6D7 363 aa15.89■□□□□ 0.13
LDB3-209ENST00000623056 A1BGP04217 495 aa15.89■□□□□ 0.13
LDB3-209ENST00000623056 IRAK1P51617 712 aa15.89■□□□□ 0.13
LDB3-209ENST00000623056 MCTP2Q6DN12 878 aa15.89■□□□□ 0.13
LDB3-209ENST00000623056 STAMQ92783 540 aa15.89■□□□□ 0.13
LDB3-209ENST00000623056 MYCBPQ99417 103 aaPredicted RBP15.89■□□□□ 0.13
LDB3-209ENST00000623056 TFR2Q9UP52 801 aa15.89■□□□□ 0.13
LDB3-209ENST00000623056 COL18A1P39060 1754 aa15.88■□□□□ 0.13
LDB3-209ENST00000623056 LOC102724159A0A0B4J2E5 919 aa15.88■□□□□ 0.13
LDB3-209ENST00000623056 GOLGA6CA6NDK9 693 aa15.88■□□□□ 0.13
LDB3-209ENST00000623056 ERLIN2O94905 339 aa15.88■□□□□ 0.13
LDB3-209ENST00000623056 GOLGA6DP0CG33 693 aa15.88■□□□□ 0.13
LDB3-209ENST00000623056 PDE6AP16499 860 aa15.88■□□□□ 0.13
LDB3-209ENST00000623056 LIG3P49916 1009 aa15.88■□□□□ 0.13
LDB3-209ENST00000623056 CKAP4Q07065 602 aaKnown RBP15.88■□□□□ 0.13
LDB3-209ENST00000623056 SPAG1Q07617 926 aa15.88■□□□□ 0.13
LDB3-209ENST00000623056 PWP2Q15269 919 aaKnown RBP15.88■□□□□ 0.13
LDB3-209ENST00000623056 E2F4Q16254 413 aa15.88■□□□□ 0.13
LDB3-209ENST00000623056 TCP11X2Q5H9J9 407 aa15.88■□□□□ 0.13
LDB3-209ENST00000623056 CCNI2Q6ZMN8 369 aaPredicted RBP15.88■□□□□ 0.13
LDB3-209ENST00000623056 KAT2BQ92831 832 aa15.88■□□□□ 0.13
LDB3-209ENST00000623056 RPGRIP1Q96KN7 1286 aa15.88■□□□□ 0.13
LDB3-209ENST00000623056 STRBPQ96SI9 672 aaKnown RBP15.88■□□□□ 0.13
LDB3-209ENST00000623056 GOLGA6AQ9NYA3 693 aa15.88■□□□□ 0.13
LDB3-209ENST00000623056 RIC1Q4ADV7 1423 aa15.88■□□□□ 0.13
LDB3-209ENST00000623056 KCNJ18B7U540 433 aa15.88■□□□□ 0.13
LDB3-209ENST00000623056 HERVK_113P62684 666 aa15.88■□□□□ 0.13
LDB3-209ENST00000623056 KCNJ12Q14500 433 aa15.88■□□□□ 0.13
LDB3-209ENST00000623056 TTF1Q15361 905 aaPredicted RBP15.88■□□□□ 0.13
LDB3-209ENST00000623056 ALX1Q15699 326 aa15.88■□□□□ 0.13
LDB3-209ENST00000623056 SWT1Q5T5J6 900 aaKnown RBP15.88■□□□□ 0.13
LDB3-209ENST00000623056 RRAGBQ5VZM2 374 aa15.88■□□□□ 0.13
LDB3-209ENST00000623056 ZKSCAN3Q9BRR0 538 aa15.88■□□□□ 0.13
LDB3-209ENST00000623056 EPB41L4AQ9HCS5 686 aaPredicted RBP15.88■□□□□ 0.13
LDB3-209ENST00000623056 RWDD2AQ9UIY3 292 aa15.88■□□□□ 0.13
LDB3-209ENST00000623056 FAM169AQ9Y6X4 670 aa15.88■□□□□ 0.13
LDB3-209ENST00000623056 CCDC122Q5T0U0 273 aa15.87■□□□□ 0.13
LDB3-209ENST00000623056 ANKRD20A12PQ8NF67 263 aa15.87■□□□□ 0.13
LDB3-209ENST00000623056 AIDAQ96BJ3 306 aa15.87■□□□□ 0.13
LDB3-209ENST00000623056 BLZF1Q9H2G9 400 aa15.87■□□□□ 0.13
LDB3-209ENST00000623056 XDHP47989 1333 aa15.87■□□□□ 0.13
LDB3-209ENST00000623056 TCRBV5S4A2TA0A5A2 114 aa15.86■□□□□ 0.13
LDB3-209ENST00000623056 TTC26A0AVF1 554 aa15.86■□□□□ 0.13
LDB3-209ENST00000623056 GOLGA6BA6NDN3 693 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms