RNA–Protein interactions for RNA: ENST00000584054.5

EIF4A1-231, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-231	ENST00000584054	TMEM47	Q9BQJ4	181 aa		11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	ZNF408	Q9H9D4	720 aa		11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	UPF2	Q9HAU5	1272 aa	Known RBP	11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	PICK1	Q9NRD5	415 aa		11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	ZHX2	Q9Y6X8	837 aa		11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	TNKS	O95271	1327 aa		11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	NID2	Q14112	1375 aa		11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	GTPBP6	O43824	516 aa	Predicted RBP	11.73	□□□□□ -0.53
EIF4A1-231	ENST00000584054	TOP1	P11387	765 aa	Known RBP	11.73	□□□□□ -0.53
EIF4A1-231	ENST00000584054	HSPA6	P17066	643 aa		11.73	□□□□□ -0.53
EIF4A1-231	ENST00000584054	ICA1	Q05084	483 aa		11.73	□□□□□ -0.53
EIF4A1-231	ENST00000584054	TROAP	Q12815	778 aa		11.73	□□□□□ -0.53
EIF4A1-231	ENST00000584054	TOB2	Q14106	344 aa	Predicted RBP	11.73	□□□□□ -0.53
EIF4A1-231	ENST00000584054	RABEP1	Q15276	862 aa		11.73	□□□□□ -0.53
EIF4A1-231	ENST00000584054	RRP12	Q5JTH9	1297 aa	Known RBP	11.73	□□□□□ -0.53
EIF4A1-231	ENST00000584054	KIAA1755	Q5JYT7	1200 aa		11.73	□□□□□ -0.53
EIF4A1-231	ENST00000584054	OPTN	Q96CV9	577 aa		11.73	□□□□□ -0.53
EIF4A1-231	ENST00000584054	ELP3	Q9H9T3	547 aa		11.73	□□□□□ -0.53
EIF4A1-231	ENST00000584054	AS3MT	Q9HBK9	375 aa		11.73	□□□□□ -0.53
EIF4A1-231	ENST00000584054	SENP2	Q9HC62	589 aa		11.73	□□□□□ -0.53
EIF4A1-231	ENST00000584054	GPHN	Q9NQX3	736 aa	Predicted RBP	11.73	□□□□□ -0.53
EIF4A1-231	ENST00000584054	EMILIN3	Q9NT22	766 aa		11.73	□□□□□ -0.53
EIF4A1-231	ENST00000584054	CYP46A1	Q9Y6A2	500 aa		11.73	□□□□□ -0.53
EIF4A1-231	ENST00000584054	THSD7B	Q9C0I4	1608 aa		11.72	□□□□□ -0.53
EIF4A1-231	ENST00000584054	USP17L10	C9JJH3	530 aa		11.72	□□□□□ -0.53
EIF4A1-231	ENST00000584054	PLA2G6	O60733	806 aa		11.72	□□□□□ -0.53
EIF4A1-231	ENST00000584054	CPA1	P15085	419 aa		11.72	□□□□□ -0.53
EIF4A1-231	ENST00000584054	CAST	P20810	708 aa	Known RBP	11.72	□□□□□ -0.53
EIF4A1-231	ENST00000584054	HOXA7	P31268	230 aa	Predicted RBP	11.72	□□□□□ -0.53
EIF4A1-231	ENST00000584054	ECE1	P42892	770 aa		11.72	□□□□□ -0.53
EIF4A1-231	ENST00000584054	SPP2	Q13103	211 aa		11.72	□□□□□ -0.53
EIF4A1-231	ENST00000584054	TTLL12	Q14166	644 aa	Predicted RBP	11.72	□□□□□ -0.53
EIF4A1-231	ENST00000584054	RAB3GAP1	Q15042	981 aa		11.72	□□□□□ -0.53
EIF4A1-231	ENST00000584054	CCDC84	Q86UT8	332 aa	Predicted RBP	11.72	□□□□□ -0.53
EIF4A1-231	ENST00000584054	CLEC10A	Q8IUN9	316 aa		11.72	□□□□□ -0.53
EIF4A1-231	ENST00000584054	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.72	□□□□□ -0.53
EIF4A1-231	ENST00000584054	LPAR1	Q92633	364 aa		11.72	□□□□□ -0.53
EIF4A1-231	ENST00000584054	GMCL1	Q96IK5	515 aa		11.72	□□□□□ -0.53
EIF4A1-231	ENST00000584054	VCPKMT	Q9H867	229 aa		11.72	□□□□□ -0.53
EIF4A1-231	ENST00000584054	CLIP2	Q9UDT6	1046 aa		11.72	□□□□□ -0.53
EIF4A1-231	ENST00000584054	PTPRF	P10586	1907 aa		11.72	□□□□□ -0.53
EIF4A1-231	ENST00000584054		F5H6K3	240 aa		11.71	□□□□□ -0.53
EIF4A1-231	ENST00000584054	MPHOSPH10	O00566	681 aa	Known RBP	11.71	□□□□□ -0.53
EIF4A1-231	ENST00000584054	IFIT3	O14879	490 aa	Known RBP	11.71	□□□□□ -0.53
EIF4A1-231	ENST00000584054	TM4SF4	P48230	202 aa		11.71	□□□□□ -0.53
EIF4A1-231	ENST00000584054	USP14	P54578	494 aa		11.71	□□□□□ -0.53
EIF4A1-231	ENST00000584054	INHBE	P58166	350 aa		11.71	□□□□□ -0.53
EIF4A1-231	ENST00000584054	KLRC3	Q07444	240 aa		11.71	□□□□□ -0.53
EIF4A1-231	ENST00000584054	DEFB115	Q30KQ5	88 aa		11.71	□□□□□ -0.53
EIF4A1-231	ENST00000584054	GPAT2	Q6NUI2	795 aa		11.71	□□□□□ -0.53
EIF4A1-231	ENST00000584054	USP17L2	Q6R6M4	530 aa		11.71	□□□□□ -0.53
EIF4A1-231	ENST00000584054	BTNL9	Q6UXG8	535 aa		11.71	□□□□□ -0.53
EIF4A1-231	ENST00000584054	CHST3	Q7LGC8	479 aa		11.71	□□□□□ -0.53
EIF4A1-231	ENST00000584054	ZKSCAN3	Q9BRR0	538 aa		11.71	□□□□□ -0.53
EIF4A1-231	ENST00000584054	UBAC1	Q9BSL1	405 aa		11.71	□□□□□ -0.53
EIF4A1-231	ENST00000584054	UPF3B	Q9BZI7	483 aa	Known RBP	11.71	□□□□□ -0.53
EIF4A1-231	ENST00000584054	RNF39	Q9H2S5	420 aa		11.71	□□□□□ -0.53
EIF4A1-231	ENST00000584054	SH2D4A	Q9H788	454 aa		11.71	□□□□□ -0.53
EIF4A1-231	ENST00000584054	ARHGEF10L	Q9HCE6	1279 aa		11.71	□□□□□ -0.53
EIF4A1-231	ENST00000584054	ZCCHC17	Q9NP64	241 aa	Known RBP	11.71	□□□□□ -0.53
EIF4A1-231	ENST00000584054	SLC45A1	Q9Y2W3	748 aa		11.71	□□□□□ -0.53
EIF4A1-231	ENST00000584054	LOC285556	D6RIA3	1793 aa		11.71	□□□□□ -0.54
EIF4A1-231	ENST00000584054	PALM3	A6NDB9	673 aa	Predicted RBP	11.7	□□□□□ -0.54
EIF4A1-231	ENST00000584054	NDUFB10	O96000	172 aa		11.7	□□□□□ -0.54
EIF4A1-231	ENST00000584054	ZNF157	P51786	506 aa	Predicted RBP	11.7	□□□□□ -0.54
EIF4A1-231	ENST00000584054	GTF2A2	P52657	109 aa		11.7	□□□□□ -0.54
EIF4A1-231	ENST00000584054	SNAPC2	Q13487	334 aa		11.7	□□□□□ -0.54
EIF4A1-231	ENST00000584054	WTAP	Q15007	396 aa		11.7	□□□□□ -0.54
EIF4A1-231	ENST00000584054	SART3	Q15020	963 aa	Known RBP	11.7	□□□□□ -0.54
EIF4A1-231	ENST00000584054	TMEM67	Q5HYA8	995 aa		11.7	□□□□□ -0.54
EIF4A1-231	ENST00000584054		Q6ZUG5	572 aa		11.7	□□□□□ -0.54
EIF4A1-231	ENST00000584054	REM2	Q8IYK8	340 aa	Predicted RBP	11.7	□□□□□ -0.54
EIF4A1-231	ENST00000584054	DNAJC5G	Q8N7S2	189 aa		11.7	□□□□□ -0.54
EIF4A1-231	ENST00000584054	RNF25	Q96BH1	459 aa	Predicted RBP	11.7	□□□□□ -0.54
EIF4A1-231	ENST00000584054	OTUD5	Q96G74	571 aa		11.7	□□□□□ -0.54
EIF4A1-231	ENST00000584054	ZNF274	Q96GC6	653 aa	Predicted RBP	11.7	□□□□□ -0.54
EIF4A1-231	ENST00000584054	PTPN18	Q99952	460 aa		11.7	□□□□□ -0.54
EIF4A1-231	ENST00000584054	TOMM22	Q9NS69	142 aa		11.7	□□□□□ -0.54
EIF4A1-231	ENST00000584054	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.7	□□□□□ -0.54
EIF4A1-231	ENST00000584054	PDRG1	Q9NUG6	133 aa		11.7	□□□□□ -0.54
EIF4A1-231	ENST00000584054	BRPF3	Q9ULD4	1205 aa		11.7	□□□□□ -0.54
EIF4A1-231	ENST00000584054	ADAMTS5	Q9UNA0	930 aa		11.7	□□□□□ -0.54
EIF4A1-231	ENST00000584054	HPS5	Q9UPZ3	1129 aa		11.7	□□□□□ -0.54
EIF4A1-231	ENST00000584054	MANSC4	A6NHS7	340 aa	Predicted RBP	11.69	□□□□□ -0.54
EIF4A1-231	ENST00000584054	WDR46	O15213	610 aa	Known RBP	11.69	□□□□□ -0.54
EIF4A1-231	ENST00000584054	DDAH1	O94760	285 aa		11.69	□□□□□ -0.54
EIF4A1-231	ENST00000584054	PDHB	P11177	359 aa		11.69	□□□□□ -0.54
EIF4A1-231	ENST00000584054	SMARCA1	P28370	1054 aa		11.69	□□□□□ -0.54
EIF4A1-231	ENST00000584054	MAP2K2	P36507	400 aa		11.69	□□□□□ -0.54
EIF4A1-231	ENST00000584054	NEK4	P51957	841 aa		11.69	□□□□□ -0.54
EIF4A1-231	ENST00000584054	NOG	Q13253	232 aa		11.69	□□□□□ -0.54
EIF4A1-231	ENST00000584054	MTMR2	Q13614	643 aa		11.69	□□□□□ -0.54
EIF4A1-231	ENST00000584054	PPP2R5B	Q15173	497 aa		11.69	□□□□□ -0.54
EIF4A1-231	ENST00000584054	IFIT1B	Q5T764	474 aa	Known RBP	11.69	□□□□□ -0.54
EIF4A1-231	ENST00000584054	APOA5	Q6Q788	366 aa		11.69	□□□□□ -0.54
EIF4A1-231	ENST00000584054	LBX2	Q6XYB7	198 aa		11.69	□□□□□ -0.54
EIF4A1-231	ENST00000584054	FASTKD5	Q7L8L6	764 aa	Known RBP	11.69	□□□□□ -0.54
EIF4A1-231	ENST00000584054	PNMA1	Q8ND90	353 aa		11.69	□□□□□ -0.54
EIF4A1-231	ENST00000584054	DCAF4	Q8WV16	495 aa		11.69	□□□□□ -0.54

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