RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 KIF1AQ12756 1690 aa16.52■□□□□ 0.23
CAPN1-214ENST00000528165 LOC102724159A0A0B4J2E5 919 aa16.51■□□□□ 0.23
CAPN1-214ENST00000528165 SRGAP2O75044 1071 aa16.51■□□□□ 0.23
CAPN1-214ENST00000528165 PWP2Q15269 919 aaKnown RBP16.51■□□□□ 0.23
CAPN1-214ENST00000528165 TTF1Q15361 905 aaPredicted RBP16.51■□□□□ 0.23
CAPN1-214ENST00000528165 CCDC122Q5T0U0 273 aa16.51■□□□□ 0.23
CAPN1-214ENST00000528165 CAGE1Q8TC20 777 aa16.51■□□□□ 0.23
CAPN1-214ENST00000528165 SYMPKQ92797 1274 aaKnown RBP16.51■□□□□ 0.23
CAPN1-214ENST00000528165 CCDC85AQ96PX6 553 aaPredicted RBP16.51■□□□□ 0.23
CAPN1-214ENST00000528165 MYH7P12883 1935 aa16.51■□□□□ 0.23
CAPN1-214ENST00000528165 GOLGA6BA6NDN3 693 aa16.51■□□□□ 0.23
CAPN1-214ENST00000528165 LIG3P49916 1009 aa16.51■□□□□ 0.23
CAPN1-214ENST00000528165 IRAK1P51617 712 aa16.51■□□□□ 0.23
CAPN1-214ENST00000528165 UBE3CQ15386 1083 aa16.51■□□□□ 0.23
CAPN1-214ENST00000528165 RRAGBQ5VZM2 374 aa16.51■□□□□ 0.23
CAPN1-214ENST00000528165 PAPD7Q5XG87 772 aaKnown RBP16.51■□□□□ 0.23
CAPN1-214ENST00000528165 AIDAQ96BJ3 306 aa16.51■□□□□ 0.23
CAPN1-214ENST00000528165 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.51■□□□□ 0.23
CAPN1-214ENST00000528165 FAM169AQ9Y6X4 670 aa16.51■□□□□ 0.23
CAPN1-214ENST00000528165 ZNF532Q9HCE3 1301 aa16.5■□□□□ 0.23
CAPN1-214ENST00000528165 MYO5AQ9Y4I1 1855 aaKnown RBP16.5■□□□□ 0.23
CAPN1-214ENST00000528165 KCNJ18B7U540 433 aa16.5■□□□□ 0.23
CAPN1-214ENST00000528165 UBXN1Q04323 297 aa16.5■□□□□ 0.23
CAPN1-214ENST00000528165 KCNJ12Q14500 433 aa16.5■□□□□ 0.23
CAPN1-214ENST00000528165 TSR1Q2NL82 804 aaKnown RBP16.5■□□□□ 0.23
CAPN1-214ENST00000528165 SWT1Q5T5J6 900 aaKnown RBP16.5■□□□□ 0.23
CAPN1-214ENST00000528165 CCDC91Q7Z6B0 441 aa16.5■□□□□ 0.23
CAPN1-214ENST00000528165 GSPT2Q8IYD1 628 aaKnown RBP16.5■□□□□ 0.23
CAPN1-214ENST00000528165 CMTR1Q8N1G2 835 aaKnown RBP16.5■□□□□ 0.23
CAPN1-214ENST00000528165 CRACR2BQ8N4Y2 399 aaPredicted RBP16.5■□□□□ 0.23
CAPN1-214ENST00000528165 EHBP1Q8NDI1 1231 aa16.5■□□□□ 0.23
CAPN1-214ENST00000528165 JAKMIP2Q96AA8 810 aa16.5■□□□□ 0.23
CAPN1-214ENST00000528165 ATRNO75882 1429 aa16.5■□□□□ 0.23
CAPN1-214ENST00000528165 CCDC196A0A1B0GTZ2 297 aa16.5■□□□□ 0.23
CAPN1-214ENST00000528165 AGPSO00116 658 aa16.5■□□□□ 0.23
CAPN1-214ENST00000528165 CTDSPL2Q05D32 466 aa16.5■□□□□ 0.23
CAPN1-214ENST00000528165 PPFIA1Q13136 1202 aa16.5■□□□□ 0.23
CAPN1-214ENST00000528165 TCP11X2Q5H9J9 407 aa16.5■□□□□ 0.23
CAPN1-214ENST00000528165 CCNI2Q6ZMN8 369 aaPredicted RBP16.5■□□□□ 0.23
CAPN1-214ENST00000528165 OR8K1Q8NGG5 319 aa16.5■□□□□ 0.23
CAPN1-214ENST00000528165 CNNM2Q9H8M5 875 aa16.5■□□□□ 0.23
CAPN1-214ENST00000528165 RWDD2AQ9UIY3 292 aa16.5■□□□□ 0.23
CAPN1-214ENST00000528165 TJP1Q07157 1748 aa16.49■□□□□ 0.23
CAPN1-214ENST00000528165 SHTN1A0MZ66 631 aa16.49■□□□□ 0.23
CAPN1-214ENST00000528165 ZC3H6P61129 1189 aaKnown RBP16.49■□□□□ 0.23
CAPN1-214ENST00000528165 PAK1Q13153 545 aa16.49■□□□□ 0.23
CAPN1-214ENST00000528165 CCDC70Q6NSX1 233 aa16.49■□□□□ 0.23
CAPN1-214ENST00000528165 GPATCH11Q8N954 259 aa16.49■□□□□ 0.23
CAPN1-214ENST00000528165 STAMQ92783 540 aa16.49■□□□□ 0.23
CAPN1-214ENST00000528165 CEP89Q96ST8 783 aa16.49■□□□□ 0.23
CAPN1-214ENST00000528165 NAPBQ9H115 298 aa16.49■□□□□ 0.23
CAPN1-214ENST00000528165 METTL24Q5JXM2 366 aa16.49■□□□□ 0.23
CAPN1-214ENST00000528165 KIAA1328Q86T90 577 aa16.49■□□□□ 0.23
CAPN1-214ENST00000528165 BCAS4Q8TDM0 211 aa16.49■□□□□ 0.23
CAPN1-214ENST00000528165 FERMT2Q96AC1 680 aa16.49■□□□□ 0.23
CAPN1-214ENST00000528165 CAPS2Q9BXY5 557 aa16.49■□□□□ 0.23
CAPN1-214ENST00000528165 KRT23Q9C075 422 aa16.49■□□□□ 0.23
CAPN1-214ENST00000528165 PIH1D3Q9NQM4 214 aaKnown RBP16.49■□□□□ 0.23
CAPN1-214ENST00000528165 LAMB4A4D0S4 1761 aa16.49■□□□□ 0.23
CAPN1-214ENST00000528165 NID2Q14112 1375 aa16.48■□□□□ 0.23
CAPN1-214ENST00000528165 MYBL2P10244 700 aa16.48■□□□□ 0.23
CAPN1-214ENST00000528165 IFIT5Q13325 482 aaKnown RBP16.48■□□□□ 0.23
CAPN1-214ENST00000528165 WTAPQ15007 396 aa16.48■□□□□ 0.23
CAPN1-214ENST00000528165 RRP12Q5JTH9 1297 aaKnown RBP16.48■□□□□ 0.23
CAPN1-214ENST00000528165 IQCEQ6IPM2 695 aa16.48■□□□□ 0.23
CAPN1-214ENST00000528165 STRBPQ96SI9 672 aaKnown RBP16.48■□□□□ 0.23
CAPN1-214ENST00000528165 LUC7L2Q9Y383 392 aaKnown RBP16.48■□□□□ 0.23
CAPN1-214ENST00000528165 ERICH2A1L162 156 aa16.48■□□□□ 0.23
CAPN1-214ENST00000528165 CYP27B1O15528 508 aa16.48■□□□□ 0.23
CAPN1-214ENST00000528165 KRT86O43790 486 aa16.48■□□□□ 0.23
CAPN1-214ENST00000528165 PDE6AP16499 860 aa16.48■□□□□ 0.23
CAPN1-214ENST00000528165 KRT83P78385 493 aa16.48■□□□□ 0.23
CAPN1-214ENST00000528165 ANKLE2Q86XL3 938 aa16.48■□□□□ 0.23
CAPN1-214ENST00000528165 NUP133Q8WUM0 1156 aa16.48■□□□□ 0.23
CAPN1-214ENST00000528165 KAT2BQ92831 832 aa16.48■□□□□ 0.23
CAPN1-214ENST00000528165 ZKSCAN3Q9BRR0 538 aa16.48■□□□□ 0.23
CAPN1-214ENST00000528165 BLZF1Q9H2G9 400 aa16.48■□□□□ 0.23
CAPN1-214ENST00000528165 TTC26A0AVF1 554 aa16.47■□□□□ 0.23
CAPN1-214ENST00000528165 FAM205CA6NFA0 338 aa16.47■□□□□ 0.23
CAPN1-214ENST00000528165 XBP1P17861 261 aa16.47■□□□□ 0.23
CAPN1-214ENST00000528165 ALX1Q15699 326 aa16.47■□□□□ 0.23
CAPN1-214ENST00000528165 GBP6Q6ZN66 633 aa16.47■□□□□ 0.23
CAPN1-214ENST00000528165 MFSD6Q6ZSS7 791 aa16.47■□□□□ 0.23
CAPN1-214ENST00000528165 NELFBQ8WX92 580 aa16.47■□□□□ 0.23
CAPN1-214ENST00000528165 ORAI2Q96SN7 254 aa16.47■□□□□ 0.23
CAPN1-214ENST00000528165 GNL3LQ9NVN8 582 aaKnown RBP16.47■□□□□ 0.23
CAPN1-214ENST00000528165 TFR2Q9UP52 801 aa16.47■□□□□ 0.23
CAPN1-214ENST00000528165 MEGF6O75095 1541 aa16.47■□□□□ 0.23
CAPN1-214ENST00000528165 USP8P40818 1118 aa16.47■□□□□ 0.23
CAPN1-214ENST00000528165 HERVK_113P62684 666 aa16.47■□□□□ 0.23
CAPN1-214ENST00000528165 AKNAD1Q5T1N1 836 aa16.47■□□□□ 0.23
CAPN1-214ENST00000528165 POTEDQ86YR6 584 aa16.47■□□□□ 0.23
CAPN1-214ENST00000528165 IFNL3Q8IZI9 196 aa16.47■□□□□ 0.23
CAPN1-214ENST00000528165 FAM184BQ9ULE4 1060 aa16.47■□□□□ 0.23
CAPN1-214ENST00000528165 BMP15O95972 392 aa16.46■□□□□ 0.23
CAPN1-214ENST00000528165 A1BGP04217 495 aa16.46■□□□□ 0.23
CAPN1-214ENST00000528165 MNAT1P51948 309 aa16.46■□□□□ 0.23
CAPN1-214ENST00000528165 PATL2C9JE40 543 aaKnown RBP16.46■□□□□ 0.23
CAPN1-214ENST00000528165 PES1O00541 588 aaKnown RBP16.46■□□□□ 0.23
CAPN1-214ENST00000528165 EIF3HO15372 352 aaKnown RBP eCLIP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms