RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 SMTNP53814 917 aa12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 NAP1L1P55209 391 aaKnown RBP12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 HDLBPQ00341 1268 aaKnown RBP12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 GRIN1Q05586 938 aa12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 MEX3CQ5U5Q3 659 aaKnown RBP12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 VPS37DQ86XT2 251 aa12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 ENOX1Q8TC92 643 aaKnown RBP12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 PSMB7Q99436 277 aa12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 VCPKMTQ9H867 229 aa12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 SEC31BQ9NQW1 1179 aa12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 HAUS2Q9NVX0 235 aa12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.64□□□□□ -0.394e-8■■■□□ 18.4
CLNS1A-204ENST00000525428 SERTAD1Q9UHV2 236 aa12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 WWC3Q9ULE0 1092 aa12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 ASAP1Q9ULH1 1129 aa12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 AHDC1Q5TGY3 1603 aaPredicted RBP12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 PDE2AO00408 941 aaPredicted RBP12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 PPARAQ07869 468 aa12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 TRAPPC11Q7Z392 1133 aa12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 PARP9Q8IXQ6 854 aa12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 JAKMIP2Q96AA8 810 aa12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 SPDL1Q96EA4 605 aa12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 ZNF274Q96GC6 653 aaPredicted RBP12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 RNPC3Q96LT9 517 aaKnown RBP12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 COL16A1Q07092 1604 aaPredicted RBP12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 OVOS2A0A0G2JMS6 1433 aa12.64□□□□□ -0.39
CLNS1A-204ENST00000525428 OPLAHO14841 1288 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 RASSF9O75901 435 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 ERCC3P19447 782 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 LSP1P33241 339 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 SF3A3Q12874 501 aaKnown RBP eCLIP12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 WLSQ5T9L3 541 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 MICALCLQ6ZW33 695 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 FAM228AQ86W67 206 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 TSEN2Q8NCE0 465 aaKnown RBP12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 VPS16Q9H269 839 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 DBNLQ9UJU6 430 aaKnown RBP12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 PCDH11XQ9BZA7 1347 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 PCDH11YQ9BZA8 1340 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 FAM208AQ9UK61 1670 aaKnown RBP12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 PES1O00541 588 aaKnown RBP12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 BACH1O14867 736 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 AP1G2O75843 785 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 IRX1P78414 480 aaPredicted RBP12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 NNTQ13423 1086 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 CCDC122Q5T0U0 273 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 CYB5D1Q6P9G0 228 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 TTC5Q8N0Z6 440 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 ZNF483Q8TF39 744 aaPredicted RBP12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 ZNF473Q8WTR7 871 aaKnown RBP12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 PPANQ9NQ55 473 aaKnown RBP12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 DMGDHQ9UI17 866 aaKnown RBP12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 FAM184BQ9ULE4 1060 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 ZNF330Q9Y3S2 320 aaPredicted RBP12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 GOLGA8KD6RF30 607 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 E7EVH7 732 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 AFMP43652 599 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 NBPF20Q3BBV1 942 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 C11orf91Q3C1V1 193 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 GRIPAP1Q4V328 841 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 TTC39AQ5SRH9 613 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 RESP18Q5W5W9 173 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 CNGA4Q8IV77 575 aa12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 RBM28Q9NW13 759 aaKnown RBP12.63□□□□□ -0.39
CLNS1A-204ENST00000525428 GOLGA6L7A0A1B0GV03 622 aa12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 KIF3CO14782 793 aa12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 OPA1O60313 960 aa12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 RTN2O75298 545 aa12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 KRT9P35527 623 aa12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 MRPL12P52815 198 aaKnown RBP12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 SPRED3Q2MJR0 410 aa12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 ACCSLQ4AC99 568 aa12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 NBPF14Q5TI25 921 aa12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 MLKLQ8NB16 471 aa12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 ZBTB10Q96DT7 871 aa12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 THOC1Q96FV9 657 aaKnown RBP12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 TPX2Q9ULW0 747 aaKnown RBP12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 LMO7Q8WWI1 1683 aa12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 AP1ARQ63HQ0 302 aa12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 TMTC1Q8IUR5 882 aa12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 PARD3BQ8TEW8 1205 aa12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 PIGBQ92521 554 aa12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 PHKBQ93100 1093 aa12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 KAZALD1Q96I82 304 aa12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 CCT8L2Q96SF2 557 aa12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 LRRC1Q9BTT6 524 aa12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 ABHD10Q9NUJ1 306 aa12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 SMARCAL1Q9NZC9 954 aa12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 ZBTB12Q9Y330 459 aaPredicted RBP12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 SPATA31A1Q5TZJ5 1347 aa12.62□□□□□ -0.39
CLNS1A-204ENST00000525428 ABCA3Q99758 1704 aa12.61□□□□□ -0.39
CLNS1A-204ENST00000525428 MACROD2A1Z1Q3 448 aa12.61□□□□□ -0.39
CLNS1A-204ENST00000525428 UBE2Q2LH0YL09 131 aa12.61□□□□□ -0.39
CLNS1A-204ENST00000525428 N4BP3O15049 544 aa12.61□□□□□ -0.39
CLNS1A-204ENST00000525428 HSF2BPO75031 334 aa12.61□□□□□ -0.39
CLNS1A-204ENST00000525428 HPDP32754 393 aaPredicted RBP12.61□□□□□ -0.39
CLNS1A-204ENST00000525428 FILIP1LQ4L180 1135 aa12.61□□□□□ -0.39
CLNS1A-204ENST00000525428 CCDC121Q6ZUS5 278 aa12.61□□□□□ -0.39
CLNS1A-204ENST00000525428 ARMC2Q8NEN0 867 aa12.61□□□□□ -0.39
CLNS1A-204ENST00000525428 DBNDD2Q9BQY9 259 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms