RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 PRKCZQ05513 592 aa10.86□□□□□ -0.67
CMTM1-208ENST00000479381 FAM110CQ1W6H9 321 aa10.86□□□□□ -0.67
CMTM1-208ENST00000479381 TMEM179Q6ZVK1 233 aa10.86□□□□□ -0.67
CMTM1-208ENST00000479381 FBXO22Q8NEZ5 403 aa10.86□□□□□ -0.67
CMTM1-208ENST00000479381 NAPBQ9H115 298 aa10.86□□□□□ -0.67
CMTM1-208ENST00000479381 ZNF287Q9HBT7 754 aa10.86□□□□□ -0.67
CMTM1-208ENST00000479381 SRRDQ9UH36 339 aa10.86□□□□□ -0.67
CMTM1-208ENST00000479381 MGAMO43451 1857 aa10.86□□□□□ -0.67
CMTM1-208ENST00000479381 DDX60LQ5H9U9 1706 aaKnown RBP10.85□□□□□ -0.67
CMTM1-208ENST00000479381 USP17L15C9J2P7 530 aa10.85□□□□□ -0.67
CMTM1-208ENST00000479381 USP17L13C9JLJ4 530 aa10.85□□□□□ -0.67
CMTM1-208ENST00000479381 USP17L11C9JVI0 530 aa10.85□□□□□ -0.67
CMTM1-208ENST00000479381 USP17L18D6R9N7 530 aa10.85□□□□□ -0.67
CMTM1-208ENST00000479381 USP17L22D6RA61 530 aa10.85□□□□□ -0.67
CMTM1-208ENST00000479381 USP17L17D6RBQ6 530 aa10.85□□□□□ -0.67
CMTM1-208ENST00000479381 USP17L19D6RCP7 530 aa10.85□□□□□ -0.67
CMTM1-208ENST00000479381 USP17L20D6RJB6 530 aa10.85□□□□□ -0.67
CMTM1-208ENST00000479381 BCRP11274 1271 aa10.85□□□□□ -0.67
CMTM1-208ENST00000479381 AKR1B1P15121 316 aa10.85□□□□□ -0.67
CMTM1-208ENST00000479381 GRK4P32298 578 aa10.85□□□□□ -0.67
CMTM1-208ENST00000479381 HERVK_113P62684 666 aa10.85□□□□□ -0.67
CMTM1-208ENST00000479381 JAG1P78504 1218 aa10.85□□□□□ -0.67
CMTM1-208ENST00000479381 USP17L24Q0WX57 530 aa10.85□□□□□ -0.67
CMTM1-208ENST00000479381 HDAC1Q13547 482 aaPredicted RBP10.85□□□□□ -0.67
CMTM1-208ENST00000479381 SH3D19Q5HYK7 790 aa10.85□□□□□ -0.67
CMTM1-208ENST00000479381 TATDN1Q6P1N9 297 aa10.85□□□□□ -0.67
CMTM1-208ENST00000479381 METTL16Q86W50 562 aaKnown RBP10.85□□□□□ -0.67
CMTM1-208ENST00000479381 GTF3C2Q8WUA4 911 aaPredicted RBP10.85□□□□□ -0.67
CMTM1-208ENST00000479381 CTDP1Q9Y5B0 961 aaPredicted RBP10.85□□□□□ -0.67
CMTM1-208ENST00000479381 ADGRA2Q96PE1 1338 aa10.84□□□□□ -0.67
CMTM1-208ENST00000479381 M0R2C6 588 aa10.84□□□□□ -0.67
CMTM1-208ENST00000479381 CDK8P49336 464 aa10.84□□□□□ -0.67
CMTM1-208ENST00000479381 CCNA1P78396 465 aa10.84□□□□□ -0.67
CMTM1-208ENST00000479381 PLS1Q14651 629 aa10.84□□□□□ -0.67
CMTM1-208ENST00000479381 ZNF444Q8N0Y2 327 aaPredicted RBP10.84□□□□□ -0.67
CMTM1-208ENST00000479381 GPRC5AQ8NFJ5 357 aa10.84□□□□□ -0.67
CMTM1-208ENST00000479381 ACER1Q8TDN7 264 aa10.84□□□□□ -0.67
CMTM1-208ENST00000479381 OSBP2Q969R2 916 aa10.84□□□□□ -0.67
CMTM1-208ENST00000479381 EVI5LQ96CN4 794 aa10.84□□□□□ -0.67
CMTM1-208ENST00000479381 CCDC17Q96LX7 622 aa10.84□□□□□ -0.67
CMTM1-208ENST00000479381 STRBPQ96SI9 672 aaKnown RBP10.84□□□□□ -0.67
CMTM1-208ENST00000479381 P2RX7Q99572 595 aaKnown RBP10.84□□□□□ -0.67
CMTM1-208ENST00000479381 RPAP3Q9H6T3 665 aaPredicted RBP10.84□□□□□ -0.67
CMTM1-208ENST00000479381 TOMM22Q9NS69 142 aa10.84□□□□□ -0.67
CMTM1-208ENST00000479381 GABRQQ9UN88 632 aa10.84□□□□□ -0.67
CMTM1-208ENST00000479381 ADCY3O60266 1144 aa10.83□□□□□ -0.68
CMTM1-208ENST00000479381 VCAM1P19320 739 aa10.83□□□□□ -0.68
CMTM1-208ENST00000479381 FLT3LGP49771 235 aa10.83□□□□□ -0.68
CMTM1-208ENST00000479381 CAP1Q01518 475 aa10.83□□□□□ -0.68
CMTM1-208ENST00000479381 C12orf60Q5U649 245 aa10.83□□□□□ -0.68
CMTM1-208ENST00000479381 CTR9Q6PD62 1173 aa10.83□□□□□ -0.68
CMTM1-208ENST00000479381 CLEC10AQ8IUN9 316 aa10.83□□□□□ -0.68
CMTM1-208ENST00000479381 SPICE1Q8N0Z3 855 aa10.83□□□□□ -0.68
CMTM1-208ENST00000479381 PI4K2BQ8TCG2 481 aa10.83□□□□□ -0.68
CMTM1-208ENST00000479381 ARMC5Q96C12 935 aa10.83□□□□□ -0.68
CMTM1-208ENST00000479381 ZNF333Q96JL9 665 aa10.83□□□□□ -0.68
CMTM1-208ENST00000479381 RNF208Q9H0X6 261 aa10.83□□□□□ -0.68
CMTM1-208ENST00000479381 EMILIN3Q9NT22 766 aa10.83□□□□□ -0.68
CMTM1-208ENST00000479381 IVNS1ABPQ9Y6Y0 642 aa10.83□□□□□ -0.68
CMTM1-208ENST00000479381 SNPHO15079 494 aa10.82□□□□□ -0.68
CMTM1-208ENST00000479381 FLOT1O75955 427 aa10.82□□□□□ -0.68
CMTM1-208ENST00000479381 ELNP15502 786 aa10.82□□□□□ -0.68
CMTM1-208ENST00000479381 CYP2B6P20813 491 aa10.82□□□□□ -0.68
CMTM1-208ENST00000479381 CTGFP29279 349 aa10.82□□□□□ -0.68
CMTM1-208ENST00000479381 PDE1AP54750 535 aa10.82□□□□□ -0.68
CMTM1-208ENST00000479381 GABPAQ06546 454 aa10.82□□□□□ -0.68
CMTM1-208ENST00000479381 PDE4BQ07343 736 aa10.82□□□□□ -0.68
CMTM1-208ENST00000479381 CCDC129Q6ZRS4 1044 aa10.82□□□□□ -0.68
CMTM1-208ENST00000479381 C16orf86Q6ZW13 317 aa10.82□□□□□ -0.68
CMTM1-208ENST00000479381 CHD1LQ86WJ1 897 aa10.82□□□□□ -0.68
CMTM1-208ENST00000479381 SEC62Q99442 399 aaKnown RBP10.82□□□□□ -0.68
CMTM1-208ENST00000479381 NUDT12Q9BQG2 462 aa10.82□□□□□ -0.68
CMTM1-208ENST00000479381 KIAA1683Q9H0B3 1180 aa10.82□□□□□ -0.68
CMTM1-208ENST00000479381 GOPCQ9HD26 462 aa10.82□□□□□ -0.68
CMTM1-208ENST00000479381 GSG1L2A8MUP6 293 aa10.81□□□□□ -0.68
CMTM1-208ENST00000479381 PATL2C9JE40 543 aaKnown RBP10.81□□□□□ -0.68
CMTM1-208ENST00000479381 PEX10O60683 326 aa10.81□□□□□ -0.68
CMTM1-208ENST00000479381 PRDM1O75626 825 aa10.81□□□□□ -0.68
CMTM1-208ENST00000479381 TSPY3P0CV98 308 aa10.81□□□□□ -0.68
CMTM1-208ENST00000479381 TSPY8P0CW00 308 aa10.81□□□□□ -0.68
CMTM1-208ENST00000479381 EN2P19622 333 aaPredicted RBP10.81□□□□□ -0.68
CMTM1-208ENST00000479381 MAPK4P31152 587 aa10.81□□□□□ -0.68
CMTM1-208ENST00000479381 HOXA7P31268 230 aaPredicted RBP10.81□□□□□ -0.68
CMTM1-208ENST00000479381 SLC4A3P48751 1232 aa10.81□□□□□ -0.68
CMTM1-208ENST00000479381 RGS19P49795 217 aa10.81□□□□□ -0.68
CMTM1-208ENST00000479381 ERVK-9P63128 1117 aa10.81□□□□□ -0.68
CMTM1-208ENST00000479381 ERVK-24P63145 666 aa10.81□□□□□ -0.68
CMTM1-208ENST00000479381 GIMAP6Q6P9H5 292 aa10.81□□□□□ -0.68
CMTM1-208ENST00000479381 IFNL3Q8IZI9 196 aa10.81□□□□□ -0.68
CMTM1-208ENST00000479381 C12orf42Q96LP6 360 aa10.81□□□□□ -0.68
CMTM1-208ENST00000479381 DIAPH3Q9NSV4 1193 aa10.81□□□□□ -0.68
CMTM1-208ENST00000479381 INHAP05111 366 aa10.8□□□□□ -0.68
CMTM1-208ENST00000479381 CCL5P13501 91 aa10.8□□□□□ -0.68
CMTM1-208ENST00000479381 EEF2P13639 858 aaKnown RBP10.8□□□□□ -0.68
CMTM1-208ENST00000479381 ZKSCAN1P17029 563 aaPredicted RBP10.8□□□□□ -0.68
CMTM1-208ENST00000479381 GUCY1A2P33402 732 aa10.8□□□□□ -0.68
CMTM1-208ENST00000479381 IKQ13123 557 aaPredicted RBP10.8□□□□□ -0.68
CMTM1-208ENST00000479381 MTFR1Q15390 333 aa10.8□□□□□ -0.68
CMTM1-208ENST00000479381 RRP12Q5JTH9 1297 aaKnown RBP10.8□□□□□ -0.68
CMTM1-208ENST00000479381 ZMYM1Q5SVZ6 1142 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms