RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 ECEL1O95672 775 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 CST3P01034 146 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 DRD2P14416 443 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 RAG1P15918 1043 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 FSTP19883 344 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 KIR3DL1P43629 444 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 ANAPC15P60006 121 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 RING1Q06587 406 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 PLEKHG6Q3KR16 790 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 PPM1JQ5JR12 505 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 ARMCX6Q7L4S7 300 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 C12orf40Q86WS4 652 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 SLFN12Q8IYM2 578 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 PHACTR4Q8IZ21 702 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 ARMC10Q8N2F6 343 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 CYB5D2Q8WUJ1 264 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 FBLIM1Q8WUP2 373 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 SMARCC1Q92922 1105 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 ISL2Q96A47 359 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 MRFAP1L1Q96HT8 127 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 ZNF408Q9H9D4 720 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 PRDM10Q9NQV6 1147 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 PRDM5Q9NQX1 630 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 ADAMTS1Q9UHI8 967 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 KCNH3Q9ULD8 1083 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 G3BP2Q9UN86 482 aaKnown RBP4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 LEMD3Q9Y2U8 911 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 MRVI1Q9Y6F6 885 aa4.4□□□□□ -1.71
HMGB1P14-201ENST00000557424 MEIS3P2A8K0S8 358 aa4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 GFRA2O00451 464 aa4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 PROCP04070 461 aa4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 CTSBP07858 339 aa4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 NFICP08651 508 aa4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 ETFBP38117 255 aa4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 SOX9P48436 509 aa4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 EIF6P56537 245 aaKnown RBP4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 FBXW10Q5XX13 1052 aa4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 ZAR1Q86SH2 424 aa4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 MCATQ8IVS2 390 aaKnown RBP4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 STK11IPQ8N1F8 1099 aa4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 TAB3Q8N5C8 712 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 C19orf47Q8N9M1 422 aaKnown RBP4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 TMEM40Q8WWA1 233 aa4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 MISP3Q96FF7 219 aa4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 WDR89Q96FK6 387 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 TMEM87BQ96K49 555 aa4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 CCDC74BQ96LY2 380 aa4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 ASPNQ9BXN1 380 aa4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 ASCC2Q9H1I8 757 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 UBP1Q9NZI7 540 aa4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 CHPF2Q9P2E5 772 aa4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 ZNRF3Q9ULT6 936 aa4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 TPX2Q9ULW0 747 aaKnown RBP4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 PCDHB14Q9Y5E9 798 aa4.39□□□□□ -1.71
HMGB1P14-201ENST00000557424 IGF2BP3O00425 579 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGB1P14-201ENST00000557424 ENPP3O14638 875 aa4.38□□□□□ -1.71
HMGB1P14-201ENST00000557424 TLR3O15455 904 aaKnown RBP4.38□□□□□ -1.71
HMGB1P14-201ENST00000557424 TPD52L2O43399 206 aaKnown RBP4.38□□□□□ -1.71
HMGB1P14-201ENST00000557424 DYRK3O43781 588 aa4.38□□□□□ -1.71
HMGB1P14-201ENST00000557424 PEX14O75381 377 aa4.38□□□□□ -1.71
HMGB1P14-201ENST00000557424 ENDOUP21128 410 aaKnown RBP4.38□□□□□ -1.71
HMGB1P14-201ENST00000557424 GARTP22102 1010 aa4.38□□□□□ -1.71
HMGB1P14-201ENST00000557424 GBP1P32455 592 aa4.38□□□□□ -1.71
HMGB1P14-201ENST00000557424 AMPD3Q01432 767 aa4.38□□□□□ -1.71
HMGB1P14-201ENST00000557424 DOC2BQ14184 412 aa4.38□□□□□ -1.71
HMGB1P14-201ENST00000557424 INPP5AQ14642 412 aa4.38□□□□□ -1.71
HMGB1P14-201ENST00000557424 CDPF1Q6NVV7 123 aa4.38□□□□□ -1.71
HMGB1P14-201ENST00000557424 OGFOD3Q6PK18 319 aa4.38□□□□□ -1.71
HMGB1P14-201ENST00000557424 SYTL4Q96C24 671 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P14-201ENST00000557424 SRRTQ9BXP5 876 aaKnown RBP4.38□□□□□ -1.71
HMGB1P14-201ENST00000557424 METTL14Q9HCE5 456 aaKnown RBP4.38□□□□□ -1.71
HMGB1P14-201ENST00000557424 BRMS1Q9HCU9 246 aa4.38□□□□□ -1.71
HMGB1P14-201ENST00000557424 GABBR1Q9UBS5 961 aa4.38□□□□□ -1.71
HMGB1P14-201ENST00000557424 REV1Q9UBZ9 1251 aa4.38□□□□□ -1.71
HMGB1P14-201ENST00000557424 KLHL3Q9UH77 587 aa4.38□□□□□ -1.71
HMGB1P14-201ENST00000557424 U2SURPO15042 1029 aaKnown RBP4.37□□□□□ -1.71
HMGB1P14-201ENST00000557424 IBSPP21815 317 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P14-201ENST00000557424 NASPP49321 788 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P14-201ENST00000557424 NFE2L2Q16236 605 aa4.37□□□□□ -1.71
HMGB1P14-201ENST00000557424 RNF187Q5TA31 235 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P14-201ENST00000557424 RASIP1Q5U651 963 aa4.37□□□□□ -1.71
HMGB1P14-201ENST00000557424 NBPF6Q5VWK0 638 aa4.37□□□□□ -1.71
HMGB1P14-201ENST00000557424 INTS3Q68E01 1043 aaKnown RBP4.37□□□□□ -1.71
HMGB1P14-201ENST00000557424 LETMD1Q6P1Q0 360 aa4.37□□□□□ -1.71
HMGB1P14-201ENST00000557424 GK5Q6ZS86 529 aa4.37□□□□□ -1.71
HMGB1P14-201ENST00000557424 C22orf34Q6ZV56 151 aa4.37□□□□□ -1.71
HMGB1P14-201ENST00000557424 NLRC3Q7RTR2 1065 aa4.37□□□□□ -1.71
HMGB1P14-201ENST00000557424 CKAP2LQ8IYA6 745 aa4.37□□□□□ -1.71
HMGB1P14-201ENST00000557424 RBBP8NLQ8NC74 664 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P14-201ENST00000557424 HNRNPLLQ8WVV9 542 aaKnown RBP4.37□□□□□ -1.71
HMGB1P14-201ENST00000557424 CCDC120Q96HB5 630 aa4.37□□□□□ -1.71
HMGB1P14-201ENST00000557424 EAF1Q96JC9 268 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P14-201ENST00000557424 NBPF4Q96M43 638 aa4.37□□□□□ -1.71
HMGB1P14-201ENST00000557424 SRPK1Q96SB4 655 aaKnown RBP4.37□□□□□ -1.71
HMGB1P14-201ENST00000557424 MIPEPQ99797 713 aa4.37□□□□□ -1.71
HMGB1P14-201ENST00000557424 TRIT1Q9H3H1 467 aaKnown RBP4.37□□□□□ -1.71
HMGB1P14-201ENST00000557424 PHAXQ9H814 394 aaKnown RBP4.37□□□□□ -1.71
HMGB1P14-201ENST00000557424 SNTG2Q9NY99 539 aa4.37□□□□□ -1.71
HMGB1P14-201ENST00000557424 PIM2Q9P1W9 311 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms