RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 ZNF512BQ96KM6 892 aaPredicted RBP14.78□□□□□ -0.04
LSM2-208ENST00000375661 C12orf42Q96LP6 360 aa14.78□□□□□ -0.04
LSM2-208ENST00000375661 MTMR10Q9NXD2 777 aa14.78□□□□□ -0.04
LSM2-208ENST00000375661 IGHDP01880 384 aa14.77□□□□□ -0.05
LSM2-208ENST00000375661 CCNA1P78396 465 aa14.77□□□□□ -0.05
LSM2-208ENST00000375661 JAG1P78504 1218 aa14.77□□□□□ -0.05
LSM2-208ENST00000375661 MAP2K5Q13163 448 aa14.77□□□□□ -0.05
LSM2-208ENST00000375661 Q3C1V9 767 aa14.77□□□□□ -0.05
LSM2-208ENST00000375661 HSP90AB4PQ58FF6 505 aa14.77□□□□□ -0.05
LSM2-208ENST00000375661 TTC39AQ5SRH9 613 aa14.77□□□□□ -0.05
LSM2-208ENST00000375661 RHPN1Q8TCX5 695 aa14.77□□□□□ -0.05
LSM2-208ENST00000375661 PALD1Q9ULE6 856 aa14.77□□□□□ -0.05
LSM2-208ENST00000375661 RABGAP1Q9Y3P9 1069 aa14.77□□□□□ -0.05
LSM2-208ENST00000375661 MSCO60682 206 aa14.76□□□□□ -0.05
LSM2-208ENST00000375661 RAB11FIP3O75154 756 aa14.76□□□□□ -0.05
LSM2-208ENST00000375661 GDF11O95390 407 aa14.76□□□□□ -0.05
LSM2-208ENST00000375661 CCND3P30281 292 aaPredicted RBP14.76□□□□□ -0.05
LSM2-208ENST00000375661 TNNI3KQ59H18 835 aa14.76□□□□□ -0.05
LSM2-208ENST00000375661 TMED8Q6PL24 325 aaPredicted RBP14.76□□□□□ -0.05
LSM2-208ENST00000375661 ERC1Q8IUD2 1116 aa14.76□□□□□ -0.05
LSM2-208ENST00000375661 PORCNQ9H237 461 aa14.76□□□□□ -0.05
LSM2-208ENST00000375661 CWC22Q9HCG8 908 aaKnown RBP14.76□□□□□ -0.05
LSM2-208ENST00000375661 EMILIN3Q9NT22 766 aa14.76□□□□□ -0.05
LSM2-208ENST00000375661 FPGT-TNNI3KV9GXZ4 949 aa14.76□□□□□ -0.05
LSM2-208ENST00000375661 USP17L15C9J2P7 530 aa14.75□□□□□ -0.05
LSM2-208ENST00000375661 USP17L13C9JLJ4 530 aa14.75□□□□□ -0.05
LSM2-208ENST00000375661 USP17L11C9JVI0 530 aa14.75□□□□□ -0.05
LSM2-208ENST00000375661 USP17L18D6R9N7 530 aa14.75□□□□□ -0.05
LSM2-208ENST00000375661 USP17L22D6RA61 530 aa14.75□□□□□ -0.05
LSM2-208ENST00000375661 USP17L17D6RBQ6 530 aa14.75□□□□□ -0.05
LSM2-208ENST00000375661 USP17L19D6RCP7 530 aa14.75□□□□□ -0.05
LSM2-208ENST00000375661 USP17L20D6RJB6 530 aa14.75□□□□□ -0.05
LSM2-208ENST00000375661 APBB1O00213 710 aa14.75□□□□□ -0.05
LSM2-208ENST00000375661 CYP2E1P05181 493 aaPredicted RBP14.75□□□□□ -0.05
LSM2-208ENST00000375661 USP14P54578 494 aa14.75□□□□□ -0.05
LSM2-208ENST00000375661 USP17L24Q0WX57 530 aa14.75□□□□□ -0.05
LSM2-208ENST00000375661 LRRC26Q2I0M4 334 aa14.75□□□□□ -0.05
LSM2-208ENST00000375661 MFSD14CQ5VZR4 134 aa14.75□□□□□ -0.05
LSM2-208ENST00000375661 FAM109BQ6ICB4 259 aaPredicted RBP14.75□□□□□ -0.05
LSM2-208ENST00000375661 TATDN1Q6P1N9 297 aa14.75□□□□□ -0.05
LSM2-208ENST00000375661 LBX2Q6XYB7 198 aa14.75□□□□□ -0.05
LSM2-208ENST00000375661 Q7L0L9 218 aa14.75□□□□□ -0.05
LSM2-208ENST00000375661 ADGRA1Q86SQ6 560 aa14.75□□□□□ -0.05
LSM2-208ENST00000375661 EAF2Q96CJ1 260 aaPredicted RBP14.75□□□□□ -0.05
LSM2-208ENST00000375661 KIF1BPQ96EK5 621 aa14.75□□□□□ -0.05
LSM2-208ENST00000375661 PAGR1Q9BTK6 254 aa14.75□□□□□ -0.05
LSM2-208ENST00000375661 LTBP2Q14767 1821 aa14.75□□□□□ -0.05
LSM2-208ENST00000375661 ZNF236Q9UL36 1845 aa14.75□□□□□ -0.05
LSM2-208ENST00000375661 RLFQ13129 1914 aa14.74□□□□□ -0.05
LSM2-208ENST00000375661 SLC15A5A6NIM6 579 aa14.74□□□□□ -0.05
LSM2-208ENST00000375661 PEX10O60683 326 aa14.74□□□□□ -0.05
LSM2-208ENST00000375661 CCL14Q16627 93 aa14.74□□□□□ -0.05
LSM2-208ENST00000375661 POTEEQ6S8J3 1075 aa14.74□□□□□ -0.05
LSM2-208ENST00000375661 EDC3Q96F86 508 aaKnown RBP14.74□□□□□ -0.05
LSM2-208ENST00000375661 DBNDD2Q9BQY9 259 aa14.74□□□□□ -0.05
LSM2-208ENST00000375661 EHD4Q9H223 541 aa14.74□□□□□ -0.05
LSM2-208ENST00000375661 RWDD1Q9H446 243 aaPredicted RBP14.74□□□□□ -0.05
LSM2-208ENST00000375661 IL1RAPL2Q9NP60 686 aa14.74□□□□□ -0.05
LSM2-208ENST00000375661 SNRKQ9NRH2 765 aa14.74□□□□□ -0.05
LSM2-208ENST00000375661 SMARCA5O60264 1052 aaPredicted RBP14.73□□□□□ -0.05
LSM2-208ENST00000375661 GH2P01242 217 aa14.73□□□□□ -0.05
LSM2-208ENST00000375661 HOXC6P09630 235 aa14.73□□□□□ -0.05
LSM2-208ENST00000375661 PTPREP23469 700 aa14.73□□□□□ -0.05
LSM2-208ENST00000375661 SHROOM1Q2M3G4 852 aaPredicted RBP14.73□□□□□ -0.05
LSM2-208ENST00000375661 CATSPERGQ6ZRH7 1159 aa14.73□□□□□ -0.05
LSM2-208ENST00000375661 LPAR1Q92633 364 aa14.73□□□□□ -0.05
LSM2-208ENST00000375661 FEZ1Q99689 392 aa14.73□□□□□ -0.05
LSM2-208ENST00000375661 LBHD1Q9BQE6 289 aaPredicted RBP14.73□□□□□ -0.05
LSM2-208ENST00000375661 KIAA1683Q9H0B3 1180 aa14.73□□□□□ -0.05
LSM2-208ENST00000375661 SAP30BPQ9UHR5 308 aaKnown RBP14.73□□□□□ -0.05
LSM2-208ENST00000375661 SERPINB13Q9UIV8 391 aa14.73□□□□□ -0.05
LSM2-208ENST00000375661 POTEB2H3BUK9 544 aa14.72□□□□□ -0.05
LSM2-208ENST00000375661 CNMDO75829 334 aa14.72□□□□□ -0.05
LSM2-208ENST00000375661 NEFLP07196 543 aa14.72□□□□□ -0.05
LSM2-208ENST00000375661 ZAP70P43403 619 aa14.72□□□□□ -0.05
LSM2-208ENST00000375661 MDM2Q00987 491 aaPredicted RBP14.72□□□□□ -0.05
LSM2-208ENST00000375661 TTC6Q86TZ1 520 aa14.72□□□□□ -0.05
LSM2-208ENST00000375661 SMC5Q8IY18 1101 aa14.72□□□□□ -0.05
LSM2-208ENST00000375661 LRRCC1Q9C099 1032 aa14.72□□□□□ -0.05
LSM2-208ENST00000375661 CCDC8Q9H0W5 538 aaPredicted RBP14.72□□□□□ -0.05
LSM2-208ENST00000375661 DDX20Q9UHI6 824 aaKnown RBP14.72□□□□□ -0.05
LSM2-208ENST00000375661 IVNS1ABPQ9Y6Y0 642 aa14.72□□□□□ -0.05
LSM2-208ENST00000375661 NAV1Q8NEY1 1877 aa14.72□□□□□ -0.05
LSM2-208ENST00000375661 MYH8P13535 1937 aa14.71□□□□□ -0.05
LSM2-208ENST00000375661 DNM1LO00429 736 aa14.71□□□□□ -0.05
LSM2-208ENST00000375661 CYP7A1P22680 504 aa14.71□□□□□ -0.05
LSM2-208ENST00000375661 USP5P45974 858 aa14.71□□□□□ -0.05
LSM2-208ENST00000375661 ATP2B2Q01814 1243 aa14.71□□□□□ -0.05
LSM2-208ENST00000375661 GRB14Q14449 540 aa14.71□□□□□ -0.05
LSM2-208ENST00000375661 SENP6Q9GZR1 1112 aaPredicted RBP14.71□□□□□ -0.05
LSM2-208ENST00000375661 PIH1D3Q9NQM4 214 aaKnown RBP14.71□□□□□ -0.05
LSM2-208ENST00000375661 TLR7Q9NYK1 1049 aaKnown RBP14.71□□□□□ -0.05
LSM2-208ENST00000375661 DBNLQ9UJU6 430 aaKnown RBP14.71□□□□□ -0.05
LSM2-208ENST00000375661 A0A0G2JMZ2 1700 aa14.7□□□□□ -0.06
LSM2-208ENST00000375661 VCAM1P19320 739 aa14.7□□□□□ -0.06
LSM2-208ENST00000375661 DYNLL1P63167 89 aaKnown RBP14.7□□□□□ -0.06
LSM2-208ENST00000375661 CERKLQ49MI3 558 aaPredicted RBP14.7□□□□□ -0.06
LSM2-208ENST00000375661 AACSQ86V21 672 aa14.7□□□□□ -0.06
LSM2-208ENST00000375661 CLASRPQ8N2M8 674 aaKnown RBP14.7□□□□□ -0.06
LSM2-208ENST00000375661 CABP5Q9NP86 173 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms