RNA–Protein interactions for RNA: ENSMUST00000223065.1

Trim27-207, Transcript of Zinc finger protein RFP, mousemouse

TSL 1 (best) BASIC

Gene Trim27, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-207ENSMUST00000223065 Lce1lQ9D1G7 135 aa7,13□□□□□ -1,27
Trim27-207ENSMUST00000223065 Gm11938Q9D3H4 131 aa7,1□□□□□ -1,27
Trim27-207ENSMUST00000223065 Krtap4-7Q9D732 168 aa7,1□□□□□ -1,27
Trim27-207ENSMUST00000223065 Lce1eQ9D139 143 aa7,08□□□□□ -1,28
Trim27-207ENSMUST00000223065 4933428G20RikQ9D3X4 101 aa6,99□□□□□ -1,29
Trim27-207ENSMUST00000223065 Lce1cQ9D1C5 147 aa6,84□□□□□ -1,31
Trim27-207ENSMUST00000223065 Syne1Q6ZWR6 8799 aa6,79□□□□□ -1,32
Trim27-207ENSMUST00000223065 Krtap19-4Q925H7 84 aa6,78□□□□□ -1,32
Trim27-207ENSMUST00000223065 Lce1a1Q9CQH5 143 aa6,75□□□□□ -1,33
Trim27-207ENSMUST00000223065 Lce3bQ9CQM7 98 aa6,75□□□□□ -1,33
Trim27-207ENSMUST00000223065 Krtap20-2E9Q0A8 60 aa6,64□□□□□ -1,35
Trim27-207ENSMUST00000223065 A0A1Y7VJH8 109 aa6,6□□□□□ -1,35
Trim27-207ENSMUST00000223065 Gm10100J3QK64 120 aa6,57□□□□□ -1,36
Trim27-207ENSMUST00000223065 Lce1fB9EJP6 147 aa6,56□□□□□ -1,36
Trim27-207ENSMUST00000223065 Lce3cQ91V05 98 aa6,43□□□□□ -1,38
Trim27-207ENSMUST00000223065 Gm10142J3KMP7 120 aa6,42□□□□□ -1,38
Trim27-207ENSMUST00000223065 Lce1kJ3QP15 125 aa6,42□□□□□ -1,38
Trim27-207ENSMUST00000223065 Krtap5-2Q9D5Z7 189 aa6,4□□□□□ -1,39
Trim27-207ENSMUST00000223065 Lce3eF8VQJ0 98 aa6,37□□□□□ -1,39
Trim27-207ENSMUST00000223065 Sprr2iO70560 76 aa6,37□□□□□ -1,39
Trim27-207ENSMUST00000223065 Lce3fQ6PAI4 98 aa6,37□□□□□ -1,39
Trim27-207ENSMUST00000223065 Lce3dE9Q8V1 98 aa6,32□□□□□ -1,4
Trim27-207ENSMUST00000223065 Macf1Q9QXZ0 7354 aaKnown RBP6,25□□□□□ -1,41
Trim27-207ENSMUST00000223065 Sprr2hO70559 108 aa6,23□□□□□ -1,41
Trim27-207ENSMUST00000223065 Gm11559Q9D3H7 191 aa6,23□□□□□ -1,41
Trim27-207ENSMUST00000223065 Gm11568A2A4M2 211 aa6,22□□□□□ -1,41
Trim27-207ENSMUST00000223065 Krtap9-1Q64526 186 aa6,22□□□□□ -1,41
Trim27-207ENSMUST00000223065 ObscnA2AAJ9 8891 aaKnown RBP6,22□□□□□ -1,41
Trim27-207ENSMUST00000223065 Mt1P02802 61 aaKnown RBP6,2□□□□□ -1,42
Trim27-207ENSMUST00000223065 Gm11554B1AQB2 190 aa6,14□□□□□ -1,43
Trim27-207ENSMUST00000223065 Eppk1Q8R0W0 6548 aa6,11□□□□□ -1,43
Trim27-207ENSMUST00000223065 Lce3aQ497I5 98 aa6,1□□□□□ -1,43
Trim27-207ENSMUST00000223065 Gm4553A0A1B0GSA9 284 aa6,07□□□□□ -1,44
Trim27-207ENSMUST00000223065 A030005L19RikA0A1Y7VIU2 113 aa6,03□□□□□ -1,44
Trim27-207ENSMUST00000223065 Sprr2eO70556 76 aa5,98□□□□□ -1,45
Trim27-207ENSMUST00000223065 Kmt2dQ6PDK2 5588 aa5,97□□□□□ -1,45
Trim27-207ENSMUST00000223065 Gm2431E9Q8S1 172 aa5,92□□□□□ -1,46
Trim27-207ENSMUST00000223065 Sprr2fO70557 76 aa5,87□□□□□ -1,47
Trim27-207ENSMUST00000223065 Krtap31-1Q9D644 177 aa5,85□□□□□ -1,47
Trim27-207ENSMUST00000223065 Gm45337A0A1B0GS71 263 aa5,84□□□□□ -1,47
Trim27-207ENSMUST00000223065 Gm11639A0A1D5RLM8 5808 aa5,79□□□□□ -1,48
Trim27-207ENSMUST00000223065 Gm10153A0A1B0GRL1 320 aa5,78□□□□□ -1,48
Trim27-207ENSMUST00000223065 Muc19Q6PZE0 7524 aa5,78□□□□□ -1,48
Trim27-207ENSMUST00000223065 Hmcn1D3YXG0 5634 aa5,77□□□□□ -1,49
Trim27-207ENSMUST00000223065 Gm40460A0A1B0GR10 244 aa5,62□□□□□ -1,51
Trim27-207ENSMUST00000223065 Gm7579A0A1B0GRJ4 243 aa5,62□□□□□ -1,51
Trim27-207ENSMUST00000223065 Krtap5-5Q2TA51 241 aa5,62□□□□□ -1,51
Trim27-207ENSMUST00000223065 Krtap5-4Q62220 223 aa5,62□□□□□ -1,51
Trim27-207ENSMUST00000223065 Mt3P28184 68 aa5,52□□□□□ -1,53
Trim27-207ENSMUST00000223065 DstQ91ZU6 7393 aaKnown RBP5,51□□□□□ -1,53
Trim27-207ENSMUST00000223065 Gm39115A0A1B0GSH7 232 aa5,5□□□□□ -1,53
Trim27-207ENSMUST00000223065 A0A1Y7VLE6 161 aa5,48□□□□□ -1,53
Trim27-207ENSMUST00000223065 Gpr98Q8VHN7 6298 aaKnown RBP5,41□□□□□ -1,54
Trim27-207ENSMUST00000223065 Gm10024A0A0A0MQA4 119 aa5,31□□□□□ -1,56
Trim27-207ENSMUST00000223065 NebE9Q1W3 7152 aa5,28□□□□□ -1,56
Trim27-207ENSMUST00000223065 Krtap4-16Q91W93 202 aa5,26□□□□□ -1,57
Trim27-207ENSMUST00000223065 Krtap31-2Q8CAY5 177 aa5,2□□□□□ -1,58
Trim27-207ENSMUST00000223065 Gm45618A0A1B0GSA0 219 aa5,07□□□□□ -1,6
Trim27-207ENSMUST00000223065 AhnakE9Q616 5656 aaKnown RBP5,06□□□□□ -1,6
Trim27-207ENSMUST00000223065 Muc16A0A140LJ72 8478 aa4,82□□□□□ -1,64
Trim27-207ENSMUST00000223065 1110025L11RikO09048 78 aa4,72□□□□□ -1,65
Trim27-207ENSMUST00000223065 Krtap6-5Q925H3 78 aa4,72□□□□□ -1,65
Trim27-207ENSMUST00000223065 A0A1Y7VJ07 166 aa4,38□□□□□ -1,71
Trim27-207ENSMUST00000223065 Sprr2bO70554 98 aa4,25□□□□□ -1,73
Trim27-207ENSMUST00000223065 Krtap28-10A0A1Y7VP58 119 aa4,2□□□□□ -1,74
Trim27-207ENSMUST00000223065 Gm10229O08631 77 aa4,18□□□□□ -1,74
Trim27-207ENSMUST00000223065 Gm29735A0A1B0GT06 219 aa4,14□□□□□ -1,75
Trim27-207ENSMUST00000223065 Krtap28-13A0A087WQP5 138 aa4,04□□□□□ -1,76
Trim27-207ENSMUST00000223065 Gm11567Q9D141 195 aa4,02□□□□□ -1,77
Trim27-207ENSMUST00000223065 A030005K14RikA0A1Y7VNY1 122 aa3,9□□□□□ -1,79
Trim27-207ENSMUST00000223065 Krtap21-1Q925H4 128 aa3,88□□□□□ -1,79
Trim27-207ENSMUST00000223065 A0A286YCP9 139 aa3,72□□□□□ -1,81
Trim27-207ENSMUST00000223065 Phgr1Q8K0G7 91 aa3,68□□□□□ -1,82
Trim27-207ENSMUST00000223065 Gm7544A0A1Y7VJ58 118 aa3,66□□□□□ -1,82
Trim27-207ENSMUST00000223065 Krtap6-2O08884 159 aa3,54□□□□□ -1,84
Trim27-207ENSMUST00000223065 A030014E15RikA0A1Y7VJV2 120 aa3,42□□□□□ -1,86
Trim27-207ENSMUST00000223065 A030003K21RikA0A1Y7VIM3 128 aa3,32□□□□□ -1,88
Trim27-207ENSMUST00000223065 Krtap5-1Q64507 230 aa3,14□□□□□ -1,91
Trim27-207ENSMUST00000223065 Gm6217A0A1Y7VJK9 128 aa3,03□□□□□ -1,92
Trim27-207ENSMUST00000223065 Gm4559A4IF42 199 aa2,41□□□□□ -2,02
Retrieved 80 of 22,080 RNA–protein pairs in 54 ms