RNA–Protein interactions for RNA: ENSMUST00000209364.1

Prpf40a-206, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 2,833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-206ENSMUST00000209364 Gm11564A2A4L9 201 aa4.24□□□□□ -1.73
Prpf40a-206ENSMUST00000209364 Gm11595B1AQA7 289 aa4.24□□□□□ -1.73
Prpf40a-206ENSMUST00000209364 Krtap4-8B1AQA8 209 aa4.24□□□□□ -1.73
Prpf40a-206ENSMUST00000209364 Mt4P47945 62 aa4.17□□□□□ -1.74
Prpf40a-206ENSMUST00000209364 Gm11562A0PK51 136 aa4.16□□□□□ -1.74
Prpf40a-206ENSMUST00000209364 Lce1cQ9D1C5 147 aa4.16□□□□□ -1.74
Prpf40a-206ENSMUST00000209364 Krtap4-9B1AQA9 244 aa4.14□□□□□ -1.75
Prpf40a-206ENSMUST00000209364 Gm10100J3QK64 120 aa4.13□□□□□ -1.75
Prpf40a-206ENSMUST00000209364 Lce1bQ9D149 137 aa4.13□□□□□ -1.75
Prpf40a-206ENSMUST00000209364 Krtap31-2Q8CAY5 177 aa4.11□□□□□ -1.75
Prpf40a-206ENSMUST00000209364 Syne1Q6ZWR6 8799 aa4.1□□□□□ -1.75
Prpf40a-206ENSMUST00000209364 Fsip2A2ARZ3 6995 aa4.09□□□□□ -1.76
Prpf40a-206ENSMUST00000209364 Gm38119A0A0A6YX29 146 aa4.08□□□□□ -1.76
Prpf40a-206ENSMUST00000209364 Gm10142J3KMP7 120 aa4.07□□□□□ -1.76
Prpf40a-206ENSMUST00000209364 Sprr2fO70557 76 aa4.06□□□□□ -1.76
Prpf40a-206ENSMUST00000209364 Lce1fB9EJP6 147 aa4.03□□□□□ -1.76
Prpf40a-206ENSMUST00000209364 Lce1a1Q9CQH5 143 aa4.03□□□□□ -1.76
Prpf40a-206ENSMUST00000209364 Lce3bQ9CQM7 98 aa4.03□□□□□ -1.76
Prpf40a-206ENSMUST00000209364 A0A1Y7VJ07 166 aa4□□□□□ -1.77
Prpf40a-206ENSMUST00000209364 Krtap4-13Q9D7P3 165 aa3.99□□□□□ -1.77
Prpf40a-206ENSMUST00000209364 A030003K21RikA0A1Y7VIM3 128 aa3.97□□□□□ -1.77
Prpf40a-206ENSMUST00000209364 2300003K06RikA2A4M0 262 aa3.96□□□□□ -1.78
Prpf40a-206ENSMUST00000209364 Krtap19-4Q925H7 84 aa3.95□□□□□ -1.78
Prpf40a-206ENSMUST00000209364 Sprr2eO70556 76 aa3.94□□□□□ -1.78
Prpf40a-206ENSMUST00000209364 Gm6217A0A1Y7VJK9 128 aa3.93□□□□□ -1.78
Prpf40a-206ENSMUST00000209364 Sprr2kO70562 68 aa3.93□□□□□ -1.78
Prpf40a-206ENSMUST00000209364 Lce3cQ91V05 98 aa3.91□□□□□ -1.78
Prpf40a-206ENSMUST00000209364 Lce3dE9Q8V1 98 aa3.9□□□□□ -1.78
Prpf40a-206ENSMUST00000209364 Sprr2hO70559 108 aa3.89□□□□□ -1.79
Prpf40a-206ENSMUST00000209364 A0A286YCP9 139 aa3.85□□□□□ -1.79
Prpf40a-206ENSMUST00000209364 Lce3eF8VQJ0 98 aa3.83□□□□□ -1.8
Prpf40a-206ENSMUST00000209364 Lce3fQ6PAI4 98 aa3.83□□□□□ -1.8
Prpf40a-206ENSMUST00000209364 Krtap4-16Q91W93 202 aa3.8□□□□□ -1.8
Prpf40a-206ENSMUST00000209364 A030014E15RikA0A1Y7VJV2 120 aa3.78□□□□□ -1.8
Prpf40a-206ENSMUST00000209364 Lce3aQ497I5 98 aa3.77□□□□□ -1.81
Prpf40a-206ENSMUST00000209364 Lce1kJ3QP15 125 aa3.77□□□□□ -1.81
Prpf40a-206ENSMUST00000209364 Krtap6-3A0A087WQL6 57 aa3.72□□□□□ -1.81
Prpf40a-206ENSMUST00000209364 Lce1lQ9D1G7 135 aa3.72□□□□□ -1.81
Prpf40a-206ENSMUST00000209364 ObscnA2AAJ9 8891 aaKnown RBP3.71□□□□□ -1.82
Prpf40a-206ENSMUST00000209364 Mt1P02802 61 aaKnown RBP3.71□□□□□ -1.82
Prpf40a-206ENSMUST00000209364 Krtap20-2E9Q0A8 60 aa3.65□□□□□ -1.82
Prpf40a-206ENSMUST00000209364 Gm11568A2A4M2 211 aa3.65□□□□□ -1.83
Prpf40a-206ENSMUST00000209364 Krtap9-1Q64526 186 aa3.65□□□□□ -1.83
Prpf40a-206ENSMUST00000209364 Krtap5-2Q9D5Z7 189 aa3.64□□□□□ -1.83
Prpf40a-206ENSMUST00000209364 Gm10153A0A1B0GRL1 320 aa3.45□□□□□ -1.86
Prpf40a-206ENSMUST00000209364 Gm10024A0A0A0MQA4 119 aa3.43□□□□□ -1.86
Prpf40a-206ENSMUST00000209364 Gm4553A0A1B0GSA9 284 aa3.36□□□□□ -1.87
Prpf40a-206ENSMUST00000209364 Gm11559Q9D3H7 191 aa3.34□□□□□ -1.87
Prpf40a-206ENSMUST00000209364 Macf1Q9QXZ0 7354 aaKnown RBP3.34□□□□□ -1.87
Prpf40a-206ENSMUST00000209364 Gm45337A0A1B0GS71 263 aa3.32□□□□□ -1.88
Prpf40a-206ENSMUST00000209364 Mt3P28184 68 aa3.31□□□□□ -1.88
Prpf40a-206ENSMUST00000209364 Gm2431E9Q8S1 172 aa3.25□□□□□ -1.89
Prpf40a-206ENSMUST00000209364 Hmcn1D3YXG0 5634 aa3.25□□□□□ -1.89
Prpf40a-206ENSMUST00000209364 Gm40460A0A1B0GR10 244 aa3.23□□□□□ -1.89
Prpf40a-206ENSMUST00000209364 Gm7579A0A1B0GRJ4 243 aa3.23□□□□□ -1.89
Prpf40a-206ENSMUST00000209364 Gm11554B1AQB2 190 aa3.23□□□□□ -1.89
Prpf40a-206ENSMUST00000209364 Krtap5-5Q2TA51 241 aa3.23□□□□□ -1.89
Prpf40a-206ENSMUST00000209364 Krtap5-4Q62220 223 aa3.23□□□□□ -1.89
Prpf40a-206ENSMUST00000209364 Muc16A0A140LJ72 8478 aa3.16□□□□□ -1.9
Prpf40a-206ENSMUST00000209364 Kmt2dQ6PDK2 5588 aa3.12□□□□□ -1.91
Prpf40a-206ENSMUST00000209364 Gm39115A0A1B0GSH7 232 aa3.01□□□□□ -1.93
Prpf40a-206ENSMUST00000209364 DstQ91ZU6 7393 aaKnown RBP2.89□□□□□ -1.95
Prpf40a-206ENSMUST00000209364 Eppk1Q8R0W0 6548 aa2.89□□□□□ -1.95
Prpf40a-206ENSMUST00000209364 Muc19Q6PZE0 7524 aa2.85□□□□□ -1.95
Prpf40a-206ENSMUST00000209364 Gm11639A0A1D5RLM8 5808 aa2.83□□□□□ -1.96
Prpf40a-206ENSMUST00000209364 1110025L11RikO09048 78 aa2.8□□□□□ -1.96
Prpf40a-206ENSMUST00000209364 Krtap6-5Q925H3 78 aa2.8□□□□□ -1.96
Prpf40a-206ENSMUST00000209364 AhnakE9Q616 5656 aaKnown RBP2.72□□□□□ -1.97
Prpf40a-206ENSMUST00000209364 Gm45618A0A1B0GSA0 219 aa2.72□□□□□ -1.97
Prpf40a-206ENSMUST00000209364 NebE9Q1W3 7152 aa2.58□□□□□ -2
Prpf40a-206ENSMUST00000209364 Gpr98Q8VHN7 6298 aaKnown RBP2.52□□□□□ -2.01
Prpf40a-206ENSMUST00000209364 Gm10229O08631 77 aa2.48□□□□□ -2.01
Prpf40a-206ENSMUST00000209364 Sprr2bO70554 98 aa2.47□□□□□ -2.01
Prpf40a-206ENSMUST00000209364 Gm29735A0A1B0GT06 219 aa2.43□□□□□ -2.02
Prpf40a-206ENSMUST00000209364 Gm11567Q9D141 195 aa2.41□□□□□ -2.02
Prpf40a-206ENSMUST00000209364 Phgr1Q8K0G7 91 aa2.32□□□□□ -2.04
Prpf40a-206ENSMUST00000209364 Krtap21-1Q925H4 128 aa2.29□□□□□ -2.04
Prpf40a-206ENSMUST00000209364 Krtap6-2O08884 159 aa2.11□□□□□ -2.07
Prpf40a-206ENSMUST00000209364 Krtap5-1Q64507 230 aa1.92□□□□□ -2.1
Prpf40a-206ENSMUST00000209364 Gm4559A4IF42 199 aa1.82□□□□□ -2.12
Retrieved 80 of 22,080 RNA–protein pairs in 111.6 ms