RNA–Protein interactions for RNA: ENSMUST00000199079.1

Rpf1-203, Transcript of Ribosome production factor 1, mousemouse

TSL 1 (best) BASIC

Gene Rpf1, Length 1,978 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-203ENSMUST00000199079 4933428G20RikQ9D3X4 101 aa5.95□□□□□ -1.46
Rpf1-203ENSMUST00000199079 Lce1dQ9D731 133 aa5.95□□□□□ -1.46
Rpf1-203ENSMUST00000199079 A030014E15RikA0A1Y7VJV2 120 aa5.94□□□□□ -1.46
Rpf1-203ENSMUST00000199079 Krtap22-2J3QNX6 67 aa5.94□□□□□ -1.46
Rpf1-203ENSMUST00000199079 Sprr2dO70555 85 aa5.93□□□□□ -1.46
Rpf1-203ENSMUST00000199079 Gm6217A0A1Y7VJK9 128 aa5.92□□□□□ -1.46
Rpf1-203ENSMUST00000199079 A0A286YCP9 139 aa5.89□□□□□ -1.47
Rpf1-203ENSMUST00000199079 Krtap4-13Q9D7P3 165 aa5.84□□□□□ -1.47
Rpf1-203ENSMUST00000199079 Gm11938Q9D3H4 131 aa5.82□□□□□ -1.48
Rpf1-203ENSMUST00000199079 Krtap6-3A0A087WQL6 57 aa5.82□□□□□ -1.48
Rpf1-203ENSMUST00000199079 Gm10272F7CZ33 110 aa5.79□□□□□ -1.48
Rpf1-203ENSMUST00000199079 Lce1eQ9D139 143 aa5.77□□□□□ -1.49
Rpf1-203ENSMUST00000199079 Sprr2kO70562 68 aa5.72□□□□□ -1.49
Rpf1-203ENSMUST00000199079 Lce1bQ9D149 137 aa5.72□□□□□ -1.49
Rpf1-203ENSMUST00000199079 Lce1lQ9D1G7 135 aa5.62□□□□□ -1.51
Rpf1-203ENSMUST00000199079 2300003K06RikA2A4M0 262 aa5.62□□□□□ -1.51
Rpf1-203ENSMUST00000199079 Gm38119A0A0A6YX29 146 aa5.61□□□□□ -1.51
Rpf1-203ENSMUST00000199079 Krtap19-4Q925H7 84 aa5.56□□□□□ -1.52
Rpf1-203ENSMUST00000199079 Lce1cQ9D1C5 147 aa5.47□□□□□ -1.53
Rpf1-203ENSMUST00000199079 Lce3bQ9CQM7 98 aa5.39□□□□□ -1.55
Rpf1-203ENSMUST00000199079 Gm10100J3QK64 120 aa5.38□□□□□ -1.55
Rpf1-203ENSMUST00000199079 Lce1a1Q9CQH5 143 aa5.35□□□□□ -1.55
Rpf1-203ENSMUST00000199079 Krtap20-2E9Q0A8 60 aa5.32□□□□□ -1.56
Rpf1-203ENSMUST00000199079 Gm10142J3KMP7 120 aa5.29□□□□□ -1.56
Rpf1-203ENSMUST00000199079 Lce1fB9EJP6 147 aa5.27□□□□□ -1.57
Rpf1-203ENSMUST00000199079 Sprr2iO70560 76 aa5.18□□□□□ -1.58
Rpf1-203ENSMUST00000199079 Sprr2hO70559 108 aa5.15□□□□□ -1.58
Rpf1-203ENSMUST00000199079 Lce3cQ91V05 98 aa5.13□□□□□ -1.59
Rpf1-203ENSMUST00000199079 Syne1Q6ZWR6 8799 aa5.12□□□□□ -1.59
Rpf1-203ENSMUST00000199079 Lce3dE9Q8V1 98 aa5.09□□□□□ -1.59
Rpf1-203ENSMUST00000199079 Sprr2eO70556 76 aa5.08□□□□□ -1.6
Rpf1-203ENSMUST00000199079 Lce3eF8VQJ0 98 aa5.06□□□□□ -1.6
Rpf1-203ENSMUST00000199079 Lce3fQ6PAI4 98 aa5.06□□□□□ -1.6
Rpf1-203ENSMUST00000199079 Krtap5-2Q9D5Z7 189 aa4.96□□□□□ -1.61
Rpf1-203ENSMUST00000199079 Eppk1Q8R0W0 6548 aa4.92□□□□□ -1.62
Rpf1-203ENSMUST00000199079 Sprr2fO70557 76 aa4.92□□□□□ -1.62
Rpf1-203ENSMUST00000199079 Lce1kJ3QP15 125 aa4.91□□□□□ -1.62
Rpf1-203ENSMUST00000199079 Lce3aQ497I5 98 aa4.91□□□□□ -1.62
Rpf1-203ENSMUST00000199079 Gm11559Q9D3H7 191 aa4.9□□□□□ -1.63
Rpf1-203ENSMUST00000199079 ObscnA2AAJ9 8891 aaKnown RBP4.83□□□□□ -1.64
Rpf1-203ENSMUST00000199079 Mt1P02802 61 aaKnown RBP4.82□□□□□ -1.64
Rpf1-203ENSMUST00000199079 Gm11554B1AQB2 190 aa4.81□□□□□ -1.64
Rpf1-203ENSMUST00000199079 Macf1Q9QXZ0 7354 aaKnown RBP4.77□□□□□ -1.65
Rpf1-203ENSMUST00000199079 Gm4553A0A1B0GSA9 284 aa4.75□□□□□ -1.65
Rpf1-203ENSMUST00000199079 Gm11568A2A4M2 211 aa4.75□□□□□ -1.65
Rpf1-203ENSMUST00000199079 Krtap9-1Q64526 186 aa4.75□□□□□ -1.65
Rpf1-203ENSMUST00000199079 Krtap31-1Q9D644 177 aa4.75□□□□□ -1.65
Rpf1-203ENSMUST00000199079 Kmt2dQ6PDK2 5588 aa4.68□□□□□ -1.66
Rpf1-203ENSMUST00000199079 Gm11639A0A1D5RLM8 5808 aa4.63□□□□□ -1.67
Rpf1-203ENSMUST00000199079 Gm2431E9Q8S1 172 aa4.6□□□□□ -1.67
Rpf1-203ENSMUST00000199079 Gm45337A0A1B0GS71 263 aa4.54□□□□□ -1.68
Rpf1-203ENSMUST00000199079 Muc19Q6PZE0 7524 aa4.52□□□□□ -1.69
Rpf1-203ENSMUST00000199079 Gm10153A0A1B0GRL1 320 aa4.41□□□□□ -1.7
Rpf1-203ENSMUST00000199079 Gpr98Q8VHN7 6298 aaKnown RBP4.4□□□□□ -1.7
Rpf1-203ENSMUST00000199079 Gm45618A0A1B0GSA0 219 aa4.39□□□□□ -1.71
Rpf1-203ENSMUST00000199079 Krtap4-16Q91W93 202 aa4.39□□□□□ -1.71
Rpf1-203ENSMUST00000199079 Gm40460A0A1B0GR10 244 aa4.37□□□□□ -1.71
Rpf1-203ENSMUST00000199079 Gm7579A0A1B0GRJ4 243 aa4.37□□□□□ -1.71
Rpf1-203ENSMUST00000199079 Krtap5-5Q2TA51 241 aa4.37□□□□□ -1.71
Rpf1-203ENSMUST00000199079 Krtap5-4Q62220 223 aa4.37□□□□□ -1.71
Rpf1-203ENSMUST00000199079 Hmcn1D3YXG0 5634 aa4.37□□□□□ -1.71
Rpf1-203ENSMUST00000199079 Gm10024A0A0A0MQA4 119 aa4.33□□□□□ -1.72
Rpf1-203ENSMUST00000199079 Gm39115A0A1B0GSH7 232 aa4.32□□□□□ -1.72
Rpf1-203ENSMUST00000199079 DstQ91ZU6 7393 aaKnown RBP4.28□□□□□ -1.72
Rpf1-203ENSMUST00000199079 Mt3P28184 68 aa4.27□□□□□ -1.73
Rpf1-203ENSMUST00000199079 NebE9Q1W3 7152 aa4.15□□□□□ -1.74
Rpf1-203ENSMUST00000199079 AhnakE9Q616 5656 aaKnown RBP3.94□□□□□ -1.78
Rpf1-203ENSMUST00000199079 Krtap31-2Q8CAY5 177 aa3.89□□□□□ -1.79
Rpf1-203ENSMUST00000199079 Gm29735A0A1B0GT06 219 aa3.76□□□□□ -1.81
Rpf1-203ENSMUST00000199079 1110025L11RikO09048 78 aa3.74□□□□□ -1.81
Rpf1-203ENSMUST00000199079 Krtap6-5Q925H3 78 aa3.74□□□□□ -1.81
Rpf1-203ENSMUST00000199079 Sprr2bO70554 98 aa3.58□□□□□ -1.84
Rpf1-203ENSMUST00000199079 Muc16A0A140LJ72 8478 aa3.56□□□□□ -1.84
Rpf1-203ENSMUST00000199079 Gm11567Q9D141 195 aa3.49□□□□□ -1.85
Rpf1-203ENSMUST00000199079 Gm10229O08631 77 aa3.29□□□□□ -1.88
Rpf1-203ENSMUST00000199079 Krtap21-1Q925H4 128 aa3.09□□□□□ -1.92
Rpf1-203ENSMUST00000199079 Krtap5-1Q64507 230 aa3.04□□□□□ -1.92
Rpf1-203ENSMUST00000199079 Phgr1Q8K0G7 91 aa3.03□□□□□ -1.92
Rpf1-203ENSMUST00000199079 Gm4559A4IF42 199 aa2.95□□□□□ -1.94
Rpf1-203ENSMUST00000199079 Krtap6-2O08884 159 aa2.75□□□□□ -1.97
Retrieved 80 of 22,080 RNA–protein pairs in 80.8 ms