RNA–Protein interactions for RNA: ENSMUST00000197480.4

Smarcc1-203, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

TSL 1 (best) BASIC

Gene Smarcc1, Length 1,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-203ENSMUST00000197480 Lce1dQ9D731 133 aa8.18□□□□□ -1.1
Smarcc1-203ENSMUST00000197480 Sprr2gO70558 76 aa8.15□□□□□ -1.1
Smarcc1-203ENSMUST00000197480 Sprr2dO70555 85 aa8.11□□□□□ -1.11
Smarcc1-203ENSMUST00000197480 Krtap6-3A0A087WQL6 57 aa8□□□□□ -1.13
Smarcc1-203ENSMUST00000197480 Lce1eQ9D139 143 aa8□□□□□ -1.13
Smarcc1-203ENSMUST00000197480 Gm9112A2AI92 75 aa7.96□□□□□ -1.13
Smarcc1-203ENSMUST00000197480 Lce1lQ9D1G7 135 aa7.93□□□□□ -1.14
Smarcc1-203ENSMUST00000197480 Krtap28-10A0A1Y7VP58 119 aa7.9□□□□□ -1.14
Smarcc1-203ENSMUST00000197480 Lce1cQ9D1C5 147 aa7.86□□□□□ -1.15
Smarcc1-203ENSMUST00000197480 A0A1Y7VLE6 161 aa7.85□□□□□ -1.15
Smarcc1-203ENSMUST00000197480 Krtap19-4Q925H7 84 aa7.82□□□□□ -1.16
Smarcc1-203ENSMUST00000197480 Lce1kJ3QP15 125 aa7.81□□□□□ -1.16
Smarcc1-203ENSMUST00000197480 Sprr2iO70560 76 aa7.81□□□□□ -1.16
Smarcc1-203ENSMUST00000197480 Krtap28-13A0A087WQP5 138 aa7.78□□□□□ -1.16
Smarcc1-203ENSMUST00000197480 4933428G20RikQ9D3X4 101 aa7.68□□□□□ -1.18
Smarcc1-203ENSMUST00000197480 Krtap20-2E9Q0A8 60 aa7.68□□□□□ -1.18
Smarcc1-203ENSMUST00000197480 Lce3cQ91V05 98 aa7.68□□□□□ -1.18
Smarcc1-203ENSMUST00000197480 A030005K14RikA0A1Y7VNY1 122 aa7.63□□□□□ -1.19
Smarcc1-203ENSMUST00000197480 Lce1fB9EJP6 147 aa7.62□□□□□ -1.19
Smarcc1-203ENSMUST00000197480 Krtap5-2Q9D5Z7 189 aa7.62□□□□□ -1.19
Smarcc1-203ENSMUST00000197480 Gm11568A2A4M2 211 aa7.58□□□□□ -1.2
Smarcc1-203ENSMUST00000197480 Krtap9-1Q64526 186 aa7.58□□□□□ -1.2
Smarcc1-203ENSMUST00000197480 Mt1P02802 61 aaKnown RBP7.56□□□□□ -1.2
Smarcc1-203ENSMUST00000197480 Lce3dE9Q8V1 98 aa7.55□□□□□ -1.2
Smarcc1-203ENSMUST00000197480 Lce3eF8VQJ0 98 aa7.53□□□□□ -1.2
Smarcc1-203ENSMUST00000197480 Lce3fQ6PAI4 98 aa7.53□□□□□ -1.2
Smarcc1-203ENSMUST00000197480 Lce1a1Q9CQH5 143 aa7.51□□□□□ -1.21
Smarcc1-203ENSMUST00000197480 ObscnA2AAJ9 8891 aaKnown RBP7.46□□□□□ -1.22
Smarcc1-203ENSMUST00000197480 Gm10100J3QK64 120 aa7.45□□□□□ -1.22
Smarcc1-203ENSMUST00000197480 Gm7544A0A1Y7VJ58 118 aa7.33□□□□□ -1.24
Smarcc1-203ENSMUST00000197480 Gm10142J3KMP7 120 aa7.25□□□□□ -1.25
Smarcc1-203ENSMUST00000197480 A030005L19RikA0A1Y7VIU2 113 aa7.22□□□□□ -1.25
Smarcc1-203ENSMUST00000197480 Lce3aQ497I5 98 aa7.21□□□□□ -1.26
Smarcc1-203ENSMUST00000197480 Gm10153A0A1B0GRL1 320 aa7.14□□□□□ -1.27
Smarcc1-203ENSMUST00000197480 Gm11559Q9D3H7 191 aa7.1□□□□□ -1.27
Smarcc1-203ENSMUST00000197480 Gm4553A0A1B0GSA9 284 aa7.09□□□□□ -1.27
Smarcc1-203ENSMUST00000197480 Sprr2hO70559 108 aa7.05□□□□□ -1.28
Smarcc1-203ENSMUST00000197480 Macf1Q9QXZ0 7354 aaKnown RBP6.98□□□□□ -1.29
Smarcc1-203ENSMUST00000197480 Gm45337A0A1B0GS71 263 aa6.96□□□□□ -1.3
Smarcc1-203ENSMUST00000197480 A0A1Y7VJ07 166 aa6.96□□□□□ -1.3
Smarcc1-203ENSMUST00000197480 Gm2431E9Q8S1 172 aa6.87□□□□□ -1.31
Smarcc1-203ENSMUST00000197480 Gm11554B1AQB2 190 aa6.86□□□□□ -1.31
Smarcc1-203ENSMUST00000197480 Mt3P28184 68 aa6.8□□□□□ -1.32
Smarcc1-203ENSMUST00000197480 A030014E15RikA0A1Y7VJV2 120 aa6.78□□□□□ -1.32
Smarcc1-203ENSMUST00000197480 Hmcn1D3YXG0 5634 aa6.77□□□□□ -1.33
Smarcc1-203ENSMUST00000197480 Gm40460A0A1B0GR10 244 aa6.76□□□□□ -1.33
Smarcc1-203ENSMUST00000197480 Gm7579A0A1B0GRJ4 243 aa6.76□□□□□ -1.33
Smarcc1-203ENSMUST00000197480 Krtap5-5Q2TA51 241 aa6.76□□□□□ -1.33
Smarcc1-203ENSMUST00000197480 Krtap5-4Q62220 223 aa6.76□□□□□ -1.33
Smarcc1-203ENSMUST00000197480 Kmt2dQ6PDK2 5588 aa6.66□□□□□ -1.34
Smarcc1-203ENSMUST00000197480 Sprr2eO70556 76 aa6.6□□□□□ -1.35
Smarcc1-203ENSMUST00000197480 A030003K21RikA0A1Y7VIM3 128 aa6.42□□□□□ -1.38
Smarcc1-203ENSMUST00000197480 A0A286YCP9 139 aa6.4□□□□□ -1.38
Smarcc1-203ENSMUST00000197480 Eppk1Q8R0W0 6548 aa6.39□□□□□ -1.39
Smarcc1-203ENSMUST00000197480 Gm39115A0A1B0GSH7 232 aa6.36□□□□□ -1.39
Smarcc1-203ENSMUST00000197480 Gm6217A0A1Y7VJK9 128 aa6.32□□□□□ -1.4
Smarcc1-203ENSMUST00000197480 Krtap31-1Q9D644 177 aa6.21□□□□□ -1.41
Smarcc1-203ENSMUST00000197480 Gm10024A0A0A0MQA4 119 aa6.15□□□□□ -1.43
Smarcc1-203ENSMUST00000197480 Sprr2fO70557 76 aa6.12□□□□□ -1.43
Smarcc1-203ENSMUST00000197480 DstQ91ZU6 7393 aaKnown RBP6.06□□□□□ -1.44
Smarcc1-203ENSMUST00000197480 Muc19Q6PZE0 7524 aa6.05□□□□□ -1.44
Smarcc1-203ENSMUST00000197480 Gm11639A0A1D5RLM8 5808 aa6.01□□□□□ -1.45
Smarcc1-203ENSMUST00000197480 Krtap4-16Q91W93 202 aa5.73□□□□□ -1.49
Smarcc1-203ENSMUST00000197480 AhnakE9Q616 5656 aaKnown RBP5.71□□□□□ -1.5
Smarcc1-203ENSMUST00000197480 1110025L11RikO09048 78 aa5.66□□□□□ -1.5
Smarcc1-203ENSMUST00000197480 Krtap6-5Q925H3 78 aa5.66□□□□□ -1.5
Smarcc1-203ENSMUST00000197480 Gm45618A0A1B0GSA0 219 aa5.62□□□□□ -1.51
Smarcc1-203ENSMUST00000197480 Muc16A0A140LJ72 8478 aa5.62□□□□□ -1.51
Smarcc1-203ENSMUST00000197480 Gpr98Q8VHN7 6298 aaKnown RBP5.55□□□□□ -1.52
Smarcc1-203ENSMUST00000197480 NebE9Q1W3 7152 aa5.5□□□□□ -1.53
Smarcc1-203ENSMUST00000197480 Gm29735A0A1B0GT06 219 aa5.06□□□□□ -1.6
Smarcc1-203ENSMUST00000197480 Gm10229O08631 77 aa5.02□□□□□ -1.61
Smarcc1-203ENSMUST00000197480 Gm11567Q9D141 195 aa4.98□□□□□ -1.61
Smarcc1-203ENSMUST00000197480 Sprr2bO70554 98 aa4.86□□□□□ -1.63
Smarcc1-203ENSMUST00000197480 Krtap21-1Q925H4 128 aa4.62□□□□□ -1.67
Smarcc1-203ENSMUST00000197480 Krtap31-2Q8CAY5 177 aa4.36□□□□□ -1.71
Smarcc1-203ENSMUST00000197480 Krtap6-2O08884 159 aa4.32□□□□□ -1.72
Smarcc1-203ENSMUST00000197480 Phgr1Q8K0G7 91 aa4.19□□□□□ -1.74
Smarcc1-203ENSMUST00000197480 Krtap5-1Q64507 230 aa3.33□□□□□ -1.88
Smarcc1-203ENSMUST00000197480 Gm4559A4IF42 199 aa2.98□□□□□ -1.93
Retrieved 80 of 22,080 RNA–protein pairs in 11.6 ms