RNA–Protein interactions for RNA: ENSMUST00000197480.4

Smarcc1-203, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

TSL 1 (best) BASIC

Gene Smarcc1, Length 1,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-203ENSMUST00000197480 Lce1dQ9D731 133 aa8,18□□□□□ -1,1
Smarcc1-203ENSMUST00000197480 Sprr2gO70558 76 aa8,15□□□□□ -1,1
Smarcc1-203ENSMUST00000197480 Sprr2dO70555 85 aa8,11□□□□□ -1,11
Smarcc1-203ENSMUST00000197480 Krtap6-3A0A087WQL6 57 aa8□□□□□ -1,13
Smarcc1-203ENSMUST00000197480 Lce1eQ9D139 143 aa8□□□□□ -1,13
Smarcc1-203ENSMUST00000197480 Gm9112A2AI92 75 aa7,96□□□□□ -1,13
Smarcc1-203ENSMUST00000197480 Lce1lQ9D1G7 135 aa7,93□□□□□ -1,14
Smarcc1-203ENSMUST00000197480 Krtap28-10A0A1Y7VP58 119 aa7,9□□□□□ -1,14
Smarcc1-203ENSMUST00000197480 Lce1cQ9D1C5 147 aa7,86□□□□□ -1,15
Smarcc1-203ENSMUST00000197480 A0A1Y7VLE6 161 aa7,85□□□□□ -1,15
Smarcc1-203ENSMUST00000197480 Krtap19-4Q925H7 84 aa7,82□□□□□ -1,16
Smarcc1-203ENSMUST00000197480 Lce1kJ3QP15 125 aa7,81□□□□□ -1,16
Smarcc1-203ENSMUST00000197480 Sprr2iO70560 76 aa7,81□□□□□ -1,16
Smarcc1-203ENSMUST00000197480 Krtap28-13A0A087WQP5 138 aa7,78□□□□□ -1,16
Smarcc1-203ENSMUST00000197480 4933428G20RikQ9D3X4 101 aa7,68□□□□□ -1,18
Smarcc1-203ENSMUST00000197480 Krtap20-2E9Q0A8 60 aa7,68□□□□□ -1,18
Smarcc1-203ENSMUST00000197480 Lce3cQ91V05 98 aa7,68□□□□□ -1,18
Smarcc1-203ENSMUST00000197480 A030005K14RikA0A1Y7VNY1 122 aa7,63□□□□□ -1,19
Smarcc1-203ENSMUST00000197480 Lce1fB9EJP6 147 aa7,62□□□□□ -1,19
Smarcc1-203ENSMUST00000197480 Krtap5-2Q9D5Z7 189 aa7,62□□□□□ -1,19
Smarcc1-203ENSMUST00000197480 Gm11568A2A4M2 211 aa7,58□□□□□ -1,2
Smarcc1-203ENSMUST00000197480 Krtap9-1Q64526 186 aa7,58□□□□□ -1,2
Smarcc1-203ENSMUST00000197480 Mt1P02802 61 aaKnown RBP7,56□□□□□ -1,2
Smarcc1-203ENSMUST00000197480 Lce3dE9Q8V1 98 aa7,55□□□□□ -1,2
Smarcc1-203ENSMUST00000197480 Lce3eF8VQJ0 98 aa7,53□□□□□ -1,2
Smarcc1-203ENSMUST00000197480 Lce3fQ6PAI4 98 aa7,53□□□□□ -1,2
Smarcc1-203ENSMUST00000197480 Lce1a1Q9CQH5 143 aa7,51□□□□□ -1,21
Smarcc1-203ENSMUST00000197480 ObscnA2AAJ9 8891 aaKnown RBP7,46□□□□□ -1,22
Smarcc1-203ENSMUST00000197480 Gm10100J3QK64 120 aa7,45□□□□□ -1,22
Smarcc1-203ENSMUST00000197480 Gm7544A0A1Y7VJ58 118 aa7,33□□□□□ -1,24
Smarcc1-203ENSMUST00000197480 Gm10142J3KMP7 120 aa7,25□□□□□ -1,25
Smarcc1-203ENSMUST00000197480 A030005L19RikA0A1Y7VIU2 113 aa7,22□□□□□ -1,25
Smarcc1-203ENSMUST00000197480 Lce3aQ497I5 98 aa7,21□□□□□ -1,26
Smarcc1-203ENSMUST00000197480 Gm10153A0A1B0GRL1 320 aa7,14□□□□□ -1,27
Smarcc1-203ENSMUST00000197480 Gm11559Q9D3H7 191 aa7,1□□□□□ -1,27
Smarcc1-203ENSMUST00000197480 Gm4553A0A1B0GSA9 284 aa7,09□□□□□ -1,27
Smarcc1-203ENSMUST00000197480 Sprr2hO70559 108 aa7,05□□□□□ -1,28
Smarcc1-203ENSMUST00000197480 Macf1Q9QXZ0 7354 aaKnown RBP6,98□□□□□ -1,29
Smarcc1-203ENSMUST00000197480 Gm45337A0A1B0GS71 263 aa6,96□□□□□ -1,3
Smarcc1-203ENSMUST00000197480 A0A1Y7VJ07 166 aa6,96□□□□□ -1,3
Smarcc1-203ENSMUST00000197480 Gm2431E9Q8S1 172 aa6,87□□□□□ -1,31
Smarcc1-203ENSMUST00000197480 Gm11554B1AQB2 190 aa6,86□□□□□ -1,31
Smarcc1-203ENSMUST00000197480 Mt3P28184 68 aa6,8□□□□□ -1,32
Smarcc1-203ENSMUST00000197480 A030014E15RikA0A1Y7VJV2 120 aa6,78□□□□□ -1,32
Smarcc1-203ENSMUST00000197480 Hmcn1D3YXG0 5634 aa6,77□□□□□ -1,33
Smarcc1-203ENSMUST00000197480 Gm40460A0A1B0GR10 244 aa6,76□□□□□ -1,33
Smarcc1-203ENSMUST00000197480 Gm7579A0A1B0GRJ4 243 aa6,76□□□□□ -1,33
Smarcc1-203ENSMUST00000197480 Krtap5-5Q2TA51 241 aa6,76□□□□□ -1,33
Smarcc1-203ENSMUST00000197480 Krtap5-4Q62220 223 aa6,76□□□□□ -1,33
Smarcc1-203ENSMUST00000197480 Kmt2dQ6PDK2 5588 aa6,66□□□□□ -1,34
Smarcc1-203ENSMUST00000197480 Sprr2eO70556 76 aa6,6□□□□□ -1,35
Smarcc1-203ENSMUST00000197480 A030003K21RikA0A1Y7VIM3 128 aa6,42□□□□□ -1,38
Smarcc1-203ENSMUST00000197480 A0A286YCP9 139 aa6,4□□□□□ -1,38
Smarcc1-203ENSMUST00000197480 Eppk1Q8R0W0 6548 aa6,39□□□□□ -1,39
Smarcc1-203ENSMUST00000197480 Gm39115A0A1B0GSH7 232 aa6,36□□□□□ -1,39
Smarcc1-203ENSMUST00000197480 Gm6217A0A1Y7VJK9 128 aa6,32□□□□□ -1,4
Smarcc1-203ENSMUST00000197480 Krtap31-1Q9D644 177 aa6,21□□□□□ -1,41
Smarcc1-203ENSMUST00000197480 Gm10024A0A0A0MQA4 119 aa6,15□□□□□ -1,43
Smarcc1-203ENSMUST00000197480 Sprr2fO70557 76 aa6,12□□□□□ -1,43
Smarcc1-203ENSMUST00000197480 DstQ91ZU6 7393 aaKnown RBP6,06□□□□□ -1,44
Smarcc1-203ENSMUST00000197480 Muc19Q6PZE0 7524 aa6,05□□□□□ -1,44
Smarcc1-203ENSMUST00000197480 Gm11639A0A1D5RLM8 5808 aa6,01□□□□□ -1,45
Smarcc1-203ENSMUST00000197480 Krtap4-16Q91W93 202 aa5,73□□□□□ -1,49
Smarcc1-203ENSMUST00000197480 AhnakE9Q616 5656 aaKnown RBP5,71□□□□□ -1,5
Smarcc1-203ENSMUST00000197480 1110025L11RikO09048 78 aa5,66□□□□□ -1,5
Smarcc1-203ENSMUST00000197480 Krtap6-5Q925H3 78 aa5,66□□□□□ -1,5
Smarcc1-203ENSMUST00000197480 Gm45618A0A1B0GSA0 219 aa5,62□□□□□ -1,51
Smarcc1-203ENSMUST00000197480 Muc16A0A140LJ72 8478 aa5,62□□□□□ -1,51
Smarcc1-203ENSMUST00000197480 Gpr98Q8VHN7 6298 aaKnown RBP5,55□□□□□ -1,52
Smarcc1-203ENSMUST00000197480 NebE9Q1W3 7152 aa5,5□□□□□ -1,53
Smarcc1-203ENSMUST00000197480 Gm29735A0A1B0GT06 219 aa5,06□□□□□ -1,6
Smarcc1-203ENSMUST00000197480 Gm10229O08631 77 aa5,02□□□□□ -1,61
Smarcc1-203ENSMUST00000197480 Gm11567Q9D141 195 aa4,98□□□□□ -1,61
Smarcc1-203ENSMUST00000197480 Sprr2bO70554 98 aa4,86□□□□□ -1,63
Smarcc1-203ENSMUST00000197480 Krtap21-1Q925H4 128 aa4,62□□□□□ -1,67
Smarcc1-203ENSMUST00000197480 Krtap31-2Q8CAY5 177 aa4,36□□□□□ -1,71
Smarcc1-203ENSMUST00000197480 Krtap6-2O08884 159 aa4,32□□□□□ -1,72
Smarcc1-203ENSMUST00000197480 Phgr1Q8K0G7 91 aa4,19□□□□□ -1,74
Smarcc1-203ENSMUST00000197480 Krtap5-1Q64507 230 aa3,33□□□□□ -1,88
Smarcc1-203ENSMUST00000197480 Gm4559A4IF42 199 aa2,98□□□□□ -1,93
Retrieved 80 of 22,080 RNA–protein pairs in 7,7 ms