RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Fsip2A2ARZ3 6995 aa3.74□□□□□ -1.81
Lig1-211ENSMUST00000177588 Mt4P47945 62 aa3.73□□□□□ -1.81
Lig1-211ENSMUST00000177588 Krtap4-9B1AQA9 244 aa3.7□□□□□ -1.82
Lig1-211ENSMUST00000177588 A0A1Y7VLE6 161 aa3.67□□□□□ -1.82
Lig1-211ENSMUST00000177588 Gm38119A0A0A6YX29 146 aa3.66□□□□□ -1.82
Lig1-211ENSMUST00000177588 Gm10100J3QK64 120 aa3.65□□□□□ -1.82
Lig1-211ENSMUST00000177588 Krtap19-4Q925H7 84 aa3.65□□□□□ -1.83
Lig1-211ENSMUST00000177588 Lce1fB9EJP6 147 aa3.64□□□□□ -1.83
Lig1-211ENSMUST00000177588 Lce1a1Q9CQH5 143 aa3.64□□□□□ -1.83
Lig1-211ENSMUST00000177588 Lce3bQ9CQM7 98 aa3.62□□□□□ -1.83
Lig1-211ENSMUST00000177588 Krtap28-13A0A087WQP5 138 aa3.61□□□□□ -1.83
Lig1-211ENSMUST00000177588 Lce1bQ9D149 137 aa3.59□□□□□ -1.83
Lig1-211ENSMUST00000177588 Gm10142J3KMP7 120 aa3.59□□□□□ -1.84
Lig1-211ENSMUST00000177588 Krtap4-13Q9D7P3 165 aa3.58□□□□□ -1.84
Lig1-211ENSMUST00000177588 Syne1Q6ZWR6 8799 aa3.57□□□□□ -1.84
Lig1-211ENSMUST00000177588 Sprr2iO70560 76 aa3.56□□□□□ -1.84
Lig1-211ENSMUST00000177588 Sprr2kO70562 68 aa3.56□□□□□ -1.84
Lig1-211ENSMUST00000177588 2300003K06RikA2A4M0 262 aa3.53□□□□□ -1.84
Lig1-211ENSMUST00000177588 A030005K14RikA0A1Y7VNY1 122 aa3.5□□□□□ -1.85
Lig1-211ENSMUST00000177588 A030005L19RikA0A1Y7VIU2 113 aa3.48□□□□□ -1.85
Lig1-211ENSMUST00000177588 Lce3cQ91V05 98 aa3.48□□□□□ -1.85
Lig1-211ENSMUST00000177588 Sprr2hO70559 108 aa3.47□□□□□ -1.85
Lig1-211ENSMUST00000177588 Lce3dE9Q8V1 98 aa3.46□□□□□ -1.86
Lig1-211ENSMUST00000177588 Sprr2eO70556 76 aa3.42□□□□□ -1.86
Lig1-211ENSMUST00000177588 Lce3eF8VQJ0 98 aa3.38□□□□□ -1.87
Lig1-211ENSMUST00000177588 Lce3fQ6PAI4 98 aa3.38□□□□□ -1.87
Lig1-211ENSMUST00000177588 Sprr2fO70557 76 aa3.37□□□□□ -1.87
Lig1-211ENSMUST00000177588 Lce1lQ9D1G7 135 aa3.37□□□□□ -1.87
Lig1-211ENSMUST00000177588 ObscnA2AAJ9 8891 aaKnown RBP3.35□□□□□ -1.87
Lig1-211ENSMUST00000177588 Lce1kJ3QP15 125 aa3.33□□□□□ -1.88
Lig1-211ENSMUST00000177588 Lce3aQ497I5 98 aa3.33□□□□□ -1.88
Lig1-211ENSMUST00000177588 Krtap6-3A0A087WQL6 57 aa3.31□□□□□ -1.88
Lig1-211ENSMUST00000177588 Gm7544A0A1Y7VJ58 118 aa3.28□□□□□ -1.88
Lig1-211ENSMUST00000177588 Macf1Q9QXZ0 7354 aaKnown RBP3.26□□□□□ -1.89
Lig1-211ENSMUST00000177588 Krtap20-2E9Q0A8 60 aa3.24□□□□□ -1.89
Lig1-211ENSMUST00000177588 Mt1P02802 61 aaKnown RBP3.17□□□□□ -1.9
Lig1-211ENSMUST00000177588 A0A1Y7VJ07 166 aa3.16□□□□□ -1.9
Lig1-211ENSMUST00000177588 Gm11568A2A4M2 211 aa3.16□□□□□ -1.9
Lig1-211ENSMUST00000177588 Krtap9-1Q64526 186 aa3.16□□□□□ -1.9
Lig1-211ENSMUST00000177588 Krtap4-16Q91W93 202 aa3.15□□□□□ -1.91
Lig1-211ENSMUST00000177588 Krtap5-2Q9D5Z7 189 aa3.13□□□□□ -1.91
Lig1-211ENSMUST00000177588 A030014E15RikA0A1Y7VJV2 120 aa3.04□□□□□ -1.92
Lig1-211ENSMUST00000177588 Gm11559Q9D3H7 191 aa3.02□□□□□ -1.93
Lig1-211ENSMUST00000177588 Muc16A0A140LJ72 8478 aa2.98□□□□□ -1.93
Lig1-211ENSMUST00000177588 Gm10153A0A1B0GRL1 320 aa2.94□□□□□ -1.94
Lig1-211ENSMUST00000177588 Gm11554B1AQB2 190 aa2.93□□□□□ -1.94
Lig1-211ENSMUST00000177588 A030003K21RikA0A1Y7VIM3 128 aa2.92□□□□□ -1.94
Lig1-211ENSMUST00000177588 Gm4553A0A1B0GSA9 284 aa2.91□□□□□ -1.94
Lig1-211ENSMUST00000177588 Gm10024A0A0A0MQA4 119 aa2.87□□□□□ -1.95
Lig1-211ENSMUST00000177588 Mt3P28184 68 aa2.87□□□□□ -1.95
Lig1-211ENSMUST00000177588 Hmcn1D3YXG0 5634 aa2.86□□□□□ -1.95
Lig1-211ENSMUST00000177588 Gm45337A0A1B0GS71 263 aa2.84□□□□□ -1.95
Lig1-211ENSMUST00000177588 Gm2431E9Q8S1 172 aa2.83□□□□□ -1.96
Lig1-211ENSMUST00000177588 DstQ91ZU6 7393 aaKnown RBP2.81□□□□□ -1.96
Lig1-211ENSMUST00000177588 Kmt2dQ6PDK2 5588 aa2.79□□□□□ -1.96
Lig1-211ENSMUST00000177588 Muc19Q6PZE0 7524 aa2.78□□□□□ -1.96
Lig1-211ENSMUST00000177588 Gm6217A0A1Y7VJK9 128 aa2.76□□□□□ -1.97
Lig1-211ENSMUST00000177588 Gm40460A0A1B0GR10 244 aa2.75□□□□□ -1.97
Lig1-211ENSMUST00000177588 Gm7579A0A1B0GRJ4 243 aa2.75□□□□□ -1.97
Lig1-211ENSMUST00000177588 Krtap5-5Q2TA51 241 aa2.75□□□□□ -1.97
Lig1-211ENSMUST00000177588 Krtap5-4Q62220 223 aa2.75□□□□□ -1.97
Lig1-211ENSMUST00000177588 Eppk1Q8R0W0 6548 aa2.75□□□□□ -1.97
Lig1-211ENSMUST00000177588 NebE9Q1W3 7152 aa2.71□□□□□ -1.97
Lig1-211ENSMUST00000177588 A0A286YCP9 139 aa2.67□□□□□ -1.98
Lig1-211ENSMUST00000177588 Gm39115A0A1B0GSH7 232 aa2.59□□□□□ -2
Lig1-211ENSMUST00000177588 Gm11639A0A1D5RLM8 5808 aa2.53□□□□□ -2
Lig1-211ENSMUST00000177588 Gpr98Q8VHN7 6298 aaKnown RBP2.51□□□□□ -2.01
Lig1-211ENSMUST00000177588 1110025L11RikO09048 78 aa2.42□□□□□ -2.02
Lig1-211ENSMUST00000177588 Krtap6-5Q925H3 78 aa2.42□□□□□ -2.02
Lig1-211ENSMUST00000177588 AhnakE9Q616 5656 aaKnown RBP2.38□□□□□ -2.03
Lig1-211ENSMUST00000177588 Sprr2bO70554 98 aa2.31□□□□□ -2.04
Lig1-211ENSMUST00000177588 Gm45618A0A1B0GSA0 219 aa2.27□□□□□ -2.05
Lig1-211ENSMUST00000177588 Gm10229O08631 77 aa2.12□□□□□ -2.07
Lig1-211ENSMUST00000177588 Gm29735A0A1B0GT06 219 aa2.09□□□□□ -2.07
Lig1-211ENSMUST00000177588 Gm11567Q9D141 195 aa2.08□□□□□ -2.08
Lig1-211ENSMUST00000177588 Phgr1Q8K0G7 91 aa2.04□□□□□ -2.08
Lig1-211ENSMUST00000177588 Krtap21-1Q925H4 128 aa2□□□□□ -2.09
Lig1-211ENSMUST00000177588 Krtap6-2O08884 159 aa1.82□□□□□ -2.12
Lig1-211ENSMUST00000177588 Krtap5-1Q64507 230 aa1.45□□□□□ -2.18
Lig1-211ENSMUST00000177588 Gm4559A4IF42 199 aa1.42□□□□□ -2.18
Retrieved 80 of 22,080 RNA–protein pairs in 375.9 ms