RNA–Protein interactions for RNA: ENSMUST00000175898.3

Six3-202, Transcript of Homeobox protein SIX3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Six3, Length 2,419 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Six3-202ENSMUST00000175898 Krtap4-1Q3UUY3 169 aa8.44□□□□□ -1.06
Six3-202ENSMUST00000175898 Krtap28-13A0A087WQP5 138 aa8.43□□□□□ -1.06
Six3-202ENSMUST00000175898 Sprr2hO70559 108 aa8.42□□□□□ -1.06
Six3-202ENSMUST00000175898 Lce3cQ91V05 98 aa8.41□□□□□ -1.06
Six3-202ENSMUST00000175898 Lce3dE9Q8V1 98 aa8.38□□□□□ -1.07
Six3-202ENSMUST00000175898 Sprr2eO70556 76 aa8.38□□□□□ -1.07
Six3-202ENSMUST00000175898 Sprr2fO70557 76 aa8.34□□□□□ -1.07
Six3-202ENSMUST00000175898 Gm11596B1AQB0 205 aa8.29□□□□□ -1.08
Six3-202ENSMUST00000175898 Sprr2kO70562 68 aa8.22□□□□□ -1.09
Six3-202ENSMUST00000175898 A030005L19RikA0A1Y7VIU2 113 aa8.21□□□□□ -1.09
Six3-202ENSMUST00000175898 Syne2Q6ZWQ0 6874 aaKnown RBP8.2□□□□□ -1.1
Six3-202ENSMUST00000175898 Lce3eF8VQJ0 98 aa8.2□□□□□ -1.1
Six3-202ENSMUST00000175898 Lce3fQ6PAI4 98 aa8.2□□□□□ -1.1
Six3-202ENSMUST00000175898 Syne1Q6ZWR6 8799 aa8.19□□□□□ -1.1
Six3-202ENSMUST00000175898 Gm11564A2A4L9 201 aa8.15□□□□□ -1.1
Six3-202ENSMUST00000175898 Gm11563B1AQ90 168 aa8.15□□□□□ -1.1
Six3-202ENSMUST00000175898 Gm11595B1AQA7 289 aa8.15□□□□□ -1.1
Six3-202ENSMUST00000175898 Krtap4-8B1AQA8 209 aa8.15□□□□□ -1.1
Six3-202ENSMUST00000175898 A030005K14RikA0A1Y7VNY1 122 aa8.14□□□□□ -1.11
Six3-202ENSMUST00000175898 2300003K06RikA2A4M0 262 aa8.14□□□□□ -1.11
Six3-202ENSMUST00000175898 Mt4P47945 62 aa8.1□□□□□ -1.11
Six3-202ENSMUST00000175898 Lce3aQ497I5 98 aa8.08□□□□□ -1.12
Six3-202ENSMUST00000175898 Fsip2A2ARZ3 6995 aa8.01□□□□□ -1.13
Six3-202ENSMUST00000175898 Gm38119A0A0A6YX29 146 aa8.01□□□□□ -1.13
Six3-202ENSMUST00000175898 Krtap4-9B1AQA9 244 aa7.98□□□□□ -1.13
Six3-202ENSMUST00000175898 Lce1bQ9D149 137 aa7.93□□□□□ -1.14
Six3-202ENSMUST00000175898 Gm7544A0A1Y7VJ58 118 aa7.9□□□□□ -1.14
Six3-202ENSMUST00000175898 ObscnA2AAJ9 8891 aaKnown RBP7.8□□□□□ -1.16
Six3-202ENSMUST00000175898 Krtap4-13Q9D7P3 165 aa7.71□□□□□ -1.17
Six3-202ENSMUST00000175898 Krtap4-16Q91W93 202 aa7.68□□□□□ -1.18
Six3-202ENSMUST00000175898 Lce1kJ3QP15 125 aa7.42□□□□□ -1.22
Six3-202ENSMUST00000175898 Krtap4-7Q9D732 168 aa7.42□□□□□ -1.22
Six3-202ENSMUST00000175898 A0A1Y7VJ07 166 aa7.36□□□□□ -1.23
Six3-202ENSMUST00000175898 Lce1lQ9D1G7 135 aa7.31□□□□□ -1.24
Six3-202ENSMUST00000175898 Mt1P02802 61 aaKnown RBP7.3□□□□□ -1.24
Six3-202ENSMUST00000175898 Krtap6-3A0A087WQL6 57 aa7.19□□□□□ -1.26
Six3-202ENSMUST00000175898 Gm11568A2A4M2 211 aa7.12□□□□□ -1.27
Six3-202ENSMUST00000175898 Krtap9-1Q64526 186 aa7.12□□□□□ -1.27
Six3-202ENSMUST00000175898 Krtap20-2E9Q0A8 60 aa7.1□□□□□ -1.27
Six3-202ENSMUST00000175898 A030003K21RikA0A1Y7VIM3 128 aa7.05□□□□□ -1.28
Six3-202ENSMUST00000175898 A030014E15RikA0A1Y7VJV2 120 aa6.99□□□□□ -1.29
Six3-202ENSMUST00000175898 Krtap5-2Q9D5Z7 189 aa6.97□□□□□ -1.29
Six3-202ENSMUST00000175898 Gm10024A0A0A0MQA4 119 aa6.94□□□□□ -1.3
Six3-202ENSMUST00000175898 Gm10153A0A1B0GRL1 320 aa6.69□□□□□ -1.34
Six3-202ENSMUST00000175898 Macf1Q9QXZ0 7354 aaKnown RBP6.65□□□□□ -1.34
Six3-202ENSMUST00000175898 Gm6217A0A1Y7VJK9 128 aa6.64□□□□□ -1.35
Six3-202ENSMUST00000175898 A0A286YCP9 139 aa6.55□□□□□ -1.36
Six3-202ENSMUST00000175898 Mt3P28184 68 aa6.47□□□□□ -1.37
Six3-202ENSMUST00000175898 Gm4553A0A1B0GSA9 284 aa6.41□□□□□ -1.38
Six3-202ENSMUST00000175898 Gm11559Q9D3H7 191 aa6.4□□□□□ -1.39
Six3-202ENSMUST00000175898 Muc16A0A140LJ72 8478 aa6.37□□□□□ -1.39
Six3-202ENSMUST00000175898 Gm45337A0A1B0GS71 263 aa6.35□□□□□ -1.39
Six3-202ENSMUST00000175898 Hmcn1D3YXG0 5634 aa6.33□□□□□ -1.4
Six3-202ENSMUST00000175898 Gm11554B1AQB2 190 aa6.26□□□□□ -1.41
Six3-202ENSMUST00000175898 Gm2431E9Q8S1 172 aa6.24□□□□□ -1.41
Six3-202ENSMUST00000175898 Kmt2dQ6PDK2 5588 aa6.19□□□□□ -1.42
Six3-202ENSMUST00000175898 Gm40460A0A1B0GR10 244 aa6.15□□□□□ -1.43
Six3-202ENSMUST00000175898 Gm7579A0A1B0GRJ4 243 aa6.15□□□□□ -1.43
Six3-202ENSMUST00000175898 Krtap5-5Q2TA51 241 aa6.15□□□□□ -1.43
Six3-202ENSMUST00000175898 Krtap5-4Q62220 223 aa6.15□□□□□ -1.43
Six3-202ENSMUST00000175898 Gm39115A0A1B0GSH7 232 aa5.76□□□□□ -1.49
Six3-202ENSMUST00000175898 1110025L11RikO09048 78 aa5.74□□□□□ -1.49
Six3-202ENSMUST00000175898 Krtap6-5Q925H3 78 aa5.74□□□□□ -1.49
Six3-202ENSMUST00000175898 Muc19Q6PZE0 7524 aa5.63□□□□□ -1.51
Six3-202ENSMUST00000175898 Eppk1Q8R0W0 6548 aa5.59□□□□□ -1.51
Six3-202ENSMUST00000175898 DstQ91ZU6 7393 aaKnown RBP5.58□□□□□ -1.52
Six3-202ENSMUST00000175898 Sprr2bO70554 98 aa5.56□□□□□ -1.52
Six3-202ENSMUST00000175898 Gm11639A0A1D5RLM8 5808 aa5.39□□□□□ -1.55
Six3-202ENSMUST00000175898 AhnakE9Q616 5656 aaKnown RBP5.16□□□□□ -1.58
Six3-202ENSMUST00000175898 Gm45618A0A1B0GSA0 219 aa5.08□□□□□ -1.6
Six3-202ENSMUST00000175898 Gm10229O08631 77 aa5.04□□□□□ -1.6
Six3-202ENSMUST00000175898 NebE9Q1W3 7152 aa4.95□□□□□ -1.62
Six3-202ENSMUST00000175898 Phgr1Q8K0G7 91 aa4.93□□□□□ -1.62
Six3-202ENSMUST00000175898 Gpr98Q8VHN7 6298 aaKnown RBP4.84□□□□□ -1.63
Six3-202ENSMUST00000175898 Gm11567Q9D141 195 aa4.76□□□□□ -1.65
Six3-202ENSMUST00000175898 Krtap21-1Q925H4 128 aa4.76□□□□□ -1.65
Six3-202ENSMUST00000175898 Gm29735A0A1B0GT06 219 aa4.64□□□□□ -1.67
Six3-202ENSMUST00000175898 Krtap6-2O08884 159 aa4.16□□□□□ -1.74
Six3-202ENSMUST00000175898 Krtap5-1Q64507 230 aa3.44□□□□□ -1.86
Six3-202ENSMUST00000175898 Gm4559A4IF42 199 aa3.35□□□□□ -1.87
Retrieved 80 of 22,080 RNA–protein pairs in 12 ms