RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 Lce3bQ9CQM7 98 aa6.79□□□□□ -1.32
Lig3-209ENSMUST00000173009 Lce1kJ3QP15 125 aa6.74□□□□□ -1.33
Lig3-209ENSMUST00000173009 Sprr2iO70560 76 aa6.74□□□□□ -1.33
Lig3-209ENSMUST00000173009 Krtap5-2Q9D5Z7 189 aa6.65□□□□□ -1.34
Lig3-209ENSMUST00000173009 2310046K23RikA0A0A6YVW6 87 aa6.64□□□□□ -1.35
Lig3-209ENSMUST00000173009 Mp68P56379 58 aa6.54□□□□□ -1.36
Lig3-209ENSMUST00000173009 Gm11568A2A4M2 211 aa6.51□□□□□ -1.37
Lig3-209ENSMUST00000173009 Krtap9-1Q64526 186 aa6.51□□□□□ -1.37
Lig3-209ENSMUST00000173009 Lce1eQ9D139 143 aa6.51□□□□□ -1.37
Lig3-209ENSMUST00000173009 Gm11938Q9D3H4 131 aa6.5□□□□□ -1.37
Lig3-209ENSMUST00000173009 Lce1fB9EJP6 147 aa6.42□□□□□ -1.38
Lig3-209ENSMUST00000173009 Lce1cQ9D1C5 147 aa6.42□□□□□ -1.38
Lig3-209ENSMUST00000173009 Gm11559Q9D3H7 191 aa6.4□□□□□ -1.38
Lig3-209ENSMUST00000173009 Gm4553A0A1B0GSA9 284 aa6.28□□□□□ -1.4
Lig3-209ENSMUST00000173009 Gm11554B1AQB2 190 aa6.26□□□□□ -1.41
Lig3-209ENSMUST00000173009 Mt1P02802 61 aaKnown RBP6.24□□□□□ -1.41
Lig3-209ENSMUST00000173009 Lce3cQ91V05 98 aa6.21□□□□□ -1.41
Lig3-209ENSMUST00000173009 Macf1Q9QXZ0 7354 aaKnown RBP6.18□□□□□ -1.42
Lig3-209ENSMUST00000173009 A030005L19RikA0A1Y7VIU2 113 aa6.11□□□□□ -1.43
Lig3-209ENSMUST00000173009 Lce3dE9Q8V1 98 aa6.11□□□□□ -1.43
Lig3-209ENSMUST00000173009 Gm2431E9Q8S1 172 aa6.09□□□□□ -1.43
Lig3-209ENSMUST00000173009 Gm45337A0A1B0GS71 263 aa6.08□□□□□ -1.44
Lig3-209ENSMUST00000173009 Gm10153A0A1B0GRL1 320 aa6.06□□□□□ -1.44
Lig3-209ENSMUST00000173009 Sprr2dO70555 85 aa6.05□□□□□ -1.44
Lig3-209ENSMUST00000173009 Kmt2dQ6PDK2 5588 aa6.05□□□□□ -1.44
Lig3-209ENSMUST00000173009 Krtap19-4Q925H7 84 aa6.03□□□□□ -1.44
Lig3-209ENSMUST00000173009 Eppk1Q8R0W0 6548 aa6.02□□□□□ -1.45
Lig3-209ENSMUST00000173009 Lce3eF8VQJ0 98 aa6□□□□□ -1.45
Lig3-209ENSMUST00000173009 Lce3fQ6PAI4 98 aa6□□□□□ -1.45
Lig3-209ENSMUST00000173009 ObscnA2AAJ9 8891 aaKnown RBP5.91□□□□□ -1.46
Lig3-209ENSMUST00000173009 Gm40460A0A1B0GR10 244 aa5.88□□□□□ -1.47
Lig3-209ENSMUST00000173009 Gm7579A0A1B0GRJ4 243 aa5.88□□□□□ -1.47
Lig3-209ENSMUST00000173009 Gm20538F6Z9R1 75 aa5.88□□□□□ -1.47
Lig3-209ENSMUST00000173009 Krtap5-5Q2TA51 241 aa5.88□□□□□ -1.47
Lig3-209ENSMUST00000173009 Krtap5-4Q62220 223 aa5.88□□□□□ -1.47
Lig3-209ENSMUST00000173009 Hmcn1D3YXG0 5634 aa5.84□□□□□ -1.47
Lig3-209ENSMUST00000173009 4933428G20RikQ9D3X4 101 aa5.8□□□□□ -1.48
Lig3-209ENSMUST00000173009 Lce3aQ497I5 98 aa5.74□□□□□ -1.49
Lig3-209ENSMUST00000173009 Mt3P28184 68 aa5.72□□□□□ -1.49
Lig3-209ENSMUST00000173009 Gm39115A0A1B0GSH7 232 aa5.67□□□□□ -1.5
Lig3-209ENSMUST00000173009 Gm11639A0A1D5RLM8 5808 aa5.66□□□□□ -1.5
Lig3-209ENSMUST00000173009 Muc19Q6PZE0 7524 aa5.61□□□□□ -1.51
Lig3-209ENSMUST00000173009 Gm10100J3QK64 120 aa5.6□□□□□ -1.51
Lig3-209ENSMUST00000173009 DstQ91ZU6 7393 aaKnown RBP5.5□□□□□ -1.53
Lig3-209ENSMUST00000173009 A0A1Y7VLE6 161 aa5.49□□□□□ -1.53
Lig3-209ENSMUST00000173009 Gm10142J3KMP7 120 aa5.41□□□□□ -1.54
Lig3-209ENSMUST00000173009 Sprr2fO70557 76 aa5.27□□□□□ -1.57
Lig3-209ENSMUST00000173009 Ndufaf8A2AMZ4 74 aa5.25□□□□□ -1.57
Lig3-209ENSMUST00000173009 Sprr2hO70559 108 aa5.24□□□□□ -1.57
Lig3-209ENSMUST00000173009 Gpr98Q8VHN7 6298 aaKnown RBP5.22□□□□□ -1.57
Lig3-209ENSMUST00000173009 Krtap4-16Q91W93 202 aa5.18□□□□□ -1.58
Lig3-209ENSMUST00000173009 NebE9Q1W3 7152 aa5.17□□□□□ -1.58
Lig3-209ENSMUST00000173009 Gm45618A0A1B0GSA0 219 aa5.16□□□□□ -1.58
Lig3-209ENSMUST00000173009 AhnakE9Q616 5656 aaKnown RBP5.14□□□□□ -1.59
Lig3-209ENSMUST00000173009 Sprr2eO70556 76 aa5.09□□□□□ -1.59
Lig3-209ENSMUST00000173009 Gm10024A0A0A0MQA4 119 aa4.93□□□□□ -1.62
Lig3-209ENSMUST00000173009 Krtap28-10A0A1Y7VP58 119 aa4.69□□□□□ -1.66
Lig3-209ENSMUST00000173009 1110025L11RikO09048 78 aa4.56□□□□□ -1.68
Lig3-209ENSMUST00000173009 Krtap6-5Q925H3 78 aa4.56□□□□□ -1.68
Lig3-209ENSMUST00000173009 Krtap28-13A0A087WQP5 138 aa4.55□□□□□ -1.68
Lig3-209ENSMUST00000173009 A0A1Y7VJ07 166 aa4.55□□□□□ -1.68
Lig3-209ENSMUST00000173009 A030005K14RikA0A1Y7VNY1 122 aa4.48□□□□□ -1.69
Lig3-209ENSMUST00000173009 Muc16A0A140LJ72 8478 aa4.4□□□□□ -1.71
Lig3-209ENSMUST00000173009 Krtap31-1Q9D644 177 aa4.39□□□□□ -1.71
Lig3-209ENSMUST00000173009 Gm29735A0A1B0GT06 219 aa4.36□□□□□ -1.71
Lig3-209ENSMUST00000173009 Gm11567Q9D141 195 aa4.22□□□□□ -1.73
Lig3-209ENSMUST00000173009 Gm7544A0A1Y7VJ58 118 aa4.12□□□□□ -1.75
Lig3-209ENSMUST00000173009 Gm9112A2AI92 75 aa4.09□□□□□ -1.76
Lig3-209ENSMUST00000173009 Gm10229O08631 77 aa4.08□□□□□ -1.76
Lig3-209ENSMUST00000173009 A030014E15RikA0A1Y7VJV2 120 aa3.95□□□□□ -1.78
Lig3-209ENSMUST00000173009 A030003K21RikA0A1Y7VIM3 128 aa3.74□□□□□ -1.81
Lig3-209ENSMUST00000173009 Krtap21-1Q925H4 128 aa3.71□□□□□ -1.82
Lig3-209ENSMUST00000173009 Sprr2bO70554 98 aa3.66□□□□□ -1.82
Lig3-209ENSMUST00000173009 Krtap6-2O08884 159 aa3.58□□□□□ -1.84
Lig3-209ENSMUST00000173009 Gm6217A0A1Y7VJK9 128 aa3.55□□□□□ -1.84
Lig3-209ENSMUST00000173009 Krtap31-2Q8CAY5 177 aa3.4□□□□□ -1.87
Lig3-209ENSMUST00000173009 A0A286YCP9 139 aa3.38□□□□□ -1.87
Lig3-209ENSMUST00000173009 Krtap5-1Q64507 230 aa3.14□□□□□ -1.91
Lig3-209ENSMUST00000173009 Phgr1Q8K0G7 91 aa3.14□□□□□ -1.91
Lig3-209ENSMUST00000173009 Gm4559A4IF42 199 aa2.53□□□□□ -2
Retrieved 80 of 22,080 RNA–protein pairs in 11.8 ms