RNA–Protein interactions for RNA: ENSMUST00000168321.7

Sema6c-213, Transcript of Semaphorin-6C, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sema6c, Length 3,553 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sema6c-213ENSMUST00000168321 Fsip2A2ARZ3 6995 aa4.6□□□□□ -1.67
Sema6c-213ENSMUST00000168321 Gm11564A2A4L9 201 aa4.59□□□□□ -1.68
Sema6c-213ENSMUST00000168321 Gm11563B1AQ90 168 aa4.59□□□□□ -1.68
Sema6c-213ENSMUST00000168321 Gm11595B1AQA7 289 aa4.59□□□□□ -1.68
Sema6c-213ENSMUST00000168321 Krtap4-8B1AQA8 209 aa4.59□□□□□ -1.68
Sema6c-213ENSMUST00000168321 Syne2Q6ZWQ0 6874 aaKnown RBP4.55□□□□□ -1.68
Sema6c-213ENSMUST00000168321 Lce3cQ91V05 98 aa4.55□□□□□ -1.68
Sema6c-213ENSMUST00000168321 Lce3eF8VQJ0 98 aa4.53□□□□□ -1.68
Sema6c-213ENSMUST00000168321 Lce3fQ6PAI4 98 aa4.53□□□□□ -1.68
Sema6c-213ENSMUST00000168321 Krtap4-9B1AQA9 244 aa4.51□□□□□ -1.69
Sema6c-213ENSMUST00000168321 Lce3dE9Q8V1 98 aa4.51□□□□□ -1.69
Sema6c-213ENSMUST00000168321 Lce1bQ9D149 137 aa4.49□□□□□ -1.69
Sema6c-213ENSMUST00000168321 Sprr2hO70559 108 aa4.47□□□□□ -1.69
Sema6c-213ENSMUST00000168321 ObscnA2AAJ9 8891 aaKnown RBP4.45□□□□□ -1.7
Sema6c-213ENSMUST00000168321 2300003K06RikA2A4M0 262 aa4.38□□□□□ -1.71
Sema6c-213ENSMUST00000168321 Sprr2iO70560 76 aa4.37□□□□□ -1.71
Sema6c-213ENSMUST00000168321 Krtap4-13Q9D7P3 165 aa4.36□□□□□ -1.71
Sema6c-213ENSMUST00000168321 Sprr2kO70562 68 aa4.33□□□□□ -1.72
Sema6c-213ENSMUST00000168321 Lce3aQ497I5 98 aa4.33□□□□□ -1.72
Sema6c-213ENSMUST00000168321 Sprr2eO70556 76 aa4.3□□□□□ -1.72
Sema6c-213ENSMUST00000168321 Lce1lQ9D1G7 135 aa4.29□□□□□ -1.72
Sema6c-213ENSMUST00000168321 Lce1kJ3QP15 125 aa4.29□□□□□ -1.72
Sema6c-213ENSMUST00000168321 Mt1P02802 61 aaKnown RBP4.27□□□□□ -1.73
Sema6c-213ENSMUST00000168321 Krtap4-7Q9D732 168 aa4.21□□□□□ -1.74
Sema6c-213ENSMUST00000168321 Sprr2fO70557 76 aa4.17□□□□□ -1.74
Sema6c-213ENSMUST00000168321 Krtap31-1Q9D644 177 aa4.16□□□□□ -1.74
Sema6c-213ENSMUST00000168321 Gm11568A2A4M2 211 aa4.08□□□□□ -1.76
Sema6c-213ENSMUST00000168321 Krtap9-1Q64526 186 aa4.08□□□□□ -1.76
Sema6c-213ENSMUST00000168321 A0A1Y7VJH8 109 aa4.06□□□□□ -1.76
Sema6c-213ENSMUST00000168321 Krtap20-2E9Q0A8 60 aa4.04□□□□□ -1.76
Sema6c-213ENSMUST00000168321 Krtap4-16Q91W93 202 aa3.96□□□□□ -1.78
Sema6c-213ENSMUST00000168321 Macf1Q9QXZ0 7354 aaKnown RBP3.94□□□□□ -1.78
Sema6c-213ENSMUST00000168321 Krtap5-2Q9D5Z7 189 aa3.94□□□□□ -1.78
Sema6c-213ENSMUST00000168321 Krtap6-3A0A087WQL6 57 aa3.86□□□□□ -1.79
Sema6c-213ENSMUST00000168321 Gm10024A0A0A0MQA4 119 aa3.82□□□□□ -1.8
Sema6c-213ENSMUST00000168321 Gm10153A0A1B0GRL1 320 aa3.82□□□□□ -1.8
Sema6c-213ENSMUST00000168321 Mt3P28184 68 aa3.78□□□□□ -1.8
Sema6c-213ENSMUST00000168321 A0A1Y7VLE6 161 aa3.73□□□□□ -1.81
Sema6c-213ENSMUST00000168321 Muc19Q6PZE0 7524 aa3.71□□□□□ -1.82
Sema6c-213ENSMUST00000168321 Hmcn1D3YXG0 5634 aa3.63□□□□□ -1.83
Sema6c-213ENSMUST00000168321 DstQ91ZU6 7393 aaKnown RBP3.62□□□□□ -1.83
Sema6c-213ENSMUST00000168321 Gm4553A0A1B0GSA9 284 aa3.59□□□□□ -1.83
Sema6c-213ENSMUST00000168321 Kmt2dQ6PDK2 5588 aa3.58□□□□□ -1.84
Sema6c-213ENSMUST00000168321 Gm45337A0A1B0GS71 263 aa3.58□□□□□ -1.84
Sema6c-213ENSMUST00000168321 Gm11559Q9D3H7 191 aa3.57□□□□□ -1.84
Sema6c-213ENSMUST00000168321 Gm11554B1AQB2 190 aa3.54□□□□□ -1.84
Sema6c-213ENSMUST00000168321 Gm2431E9Q8S1 172 aa3.5□□□□□ -1.85
Sema6c-213ENSMUST00000168321 Gm40460A0A1B0GR10 244 aa3.47□□□□□ -1.85
Sema6c-213ENSMUST00000168321 Gm7579A0A1B0GRJ4 243 aa3.47□□□□□ -1.85
Sema6c-213ENSMUST00000168321 Krtap5-5Q2TA51 241 aa3.47□□□□□ -1.85
Sema6c-213ENSMUST00000168321 Krtap5-4Q62220 223 aa3.47□□□□□ -1.85
Sema6c-213ENSMUST00000168321 1110025L11RikO09048 78 aa3.28□□□□□ -1.88
Sema6c-213ENSMUST00000168321 Krtap6-5Q925H3 78 aa3.28□□□□□ -1.88
Sema6c-213ENSMUST00000168321 NebE9Q1W3 7152 aa3.2□□□□□ -1.9
Sema6c-213ENSMUST00000168321 Gm39115A0A1B0GSH7 232 aa3.16□□□□□ -1.9
Sema6c-213ENSMUST00000168321 Krtap31-2Q8CAY5 177 aa3.12□□□□□ -1.91
Sema6c-213ENSMUST00000168321 Gm11639A0A1D5RLM8 5808 aa3.08□□□□□ -1.92
Sema6c-213ENSMUST00000168321 A030005L19RikA0A1Y7VIU2 113 aa3.08□□□□□ -1.92
Sema6c-213ENSMUST00000168321 AhnakE9Q616 5656 aaKnown RBP2.98□□□□□ -1.93
Sema6c-213ENSMUST00000168321 Sprr2bO70554 98 aa2.97□□□□□ -1.93
Sema6c-213ENSMUST00000168321 A0A1Y7VJ07 166 aa2.93□□□□□ -1.94
Sema6c-213ENSMUST00000168321 Eppk1Q8R0W0 6548 aa2.92□□□□□ -1.94
Sema6c-213ENSMUST00000168321 Gm10229O08631 77 aa2.9□□□□□ -1.95
Sema6c-213ENSMUST00000168321 Gm11567Q9D141 195 aa2.75□□□□□ -1.97
Sema6c-213ENSMUST00000168321 Krtap21-1Q925H4 128 aa2.69□□□□□ -1.98
Sema6c-213ENSMUST00000168321 Gm45618A0A1B0GSA0 219 aa2.66□□□□□ -1.98
Sema6c-213ENSMUST00000168321 Phgr1Q8K0G7 91 aa2.63□□□□□ -1.99
Sema6c-213ENSMUST00000168321 Gm29735A0A1B0GT06 219 aa2.63□□□□□ -1.99
Sema6c-213ENSMUST00000168321 A0A286YCP9 139 aa2.6□□□□□ -1.99
Sema6c-213ENSMUST00000168321 Gpr98Q8VHN7 6298 aaKnown RBP2.6□□□□□ -1.99
Sema6c-213ENSMUST00000168321 Krtap6-2O08884 159 aa2.44□□□□□ -2.02
Sema6c-213ENSMUST00000168321 A030003K21RikA0A1Y7VIM3 128 aa1.68□□□□□ -2.14
Sema6c-213ENSMUST00000168321 Krtap5-1Q64507 230 aa1.57□□□□□ -2.16
Sema6c-213ENSMUST00000168321 Gm4559A4IF42 199 aa1.52□□□□□ -2.17
Sema6c-213ENSMUST00000168321 Krtap28-13A0A087WQP5 138 aa1.44□□□□□ -2.18
Sema6c-213ENSMUST00000168321 Gm6217A0A1Y7VJK9 128 aa1.21□□□□□ -2.22
Sema6c-213ENSMUST00000168321 Krtap28-10A0A1Y7VP58 119 aa0.92□□□□□ -2.26
Sema6c-213ENSMUST00000168321 A030005K14RikA0A1Y7VNY1 122 aa0.67□□□□□ -2.3
Sema6c-213ENSMUST00000168321 A030014E15RikA0A1Y7VJV2 120 aa0.66□□□□□ -2.3
Sema6c-213ENSMUST00000168321 Gm7544A0A1Y7VJ58 118 aa0.57□□□□□ -2.32
Retrieved 80 of 22,080 RNA–protein pairs in 11.5 ms