RNA–Protein interactions for RNA: ENSMUST00000167546.1

Usf1-210, Transcript of Upstream stimulatory factor 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usf1, Length 1,822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1-210ENSMUST00000167546 A0A1Y7VJH8 109 aa7.84□□□□□ -1.15
Usf1-210ENSMUST00000167546 Gm10272F7CZ33 110 aa7.79□□□□□ -1.16
Usf1-210ENSMUST00000167546 2310046K23RikA0A0A6YVW6 87 aa7.73□□□□□ -1.17
Usf1-210ENSMUST00000167546 Sprr2iO70560 76 aa7.71□□□□□ -1.18
Usf1-210ENSMUST00000167546 Lce3bQ9CQM7 98 aa7.68□□□□□ -1.18
Usf1-210ENSMUST00000167546 Lce1kJ3QP15 125 aa7.66□□□□□ -1.18
Usf1-210ENSMUST00000167546 Krtap5-2Q9D5Z7 189 aa7.66□□□□□ -1.18
Usf1-210ENSMUST00000167546 Syne1Q6ZWR6 8799 aa7.66□□□□□ -1.18
Usf1-210ENSMUST00000167546 Lce1eQ9D139 143 aa7.65□□□□□ -1.18
Usf1-210ENSMUST00000167546 Gm9112A2AI92 75 aa7.43□□□□□ -1.22
Usf1-210ENSMUST00000167546 Gm11568A2A4M2 211 aa7.42□□□□□ -1.22
Usf1-210ENSMUST00000167546 Krtap9-1Q64526 186 aa7.42□□□□□ -1.22
Usf1-210ENSMUST00000167546 Gm11559Q9D3H7 191 aa7.41□□□□□ -1.22
Usf1-210ENSMUST00000167546 Lce1fB9EJP6 147 aa7.29□□□□□ -1.24
Usf1-210ENSMUST00000167546 Lce1cQ9D1C5 147 aa7.29□□□□□ -1.24
Usf1-210ENSMUST00000167546 Gm4553A0A1B0GSA9 284 aa7.27□□□□□ -1.25
Usf1-210ENSMUST00000167546 Gm11938Q9D3H4 131 aa7.25□□□□□ -1.25
Usf1-210ENSMUST00000167546 Gm11554B1AQB2 190 aa7.21□□□□□ -1.26
Usf1-210ENSMUST00000167546 A030005L19RikA0A1Y7VIU2 113 aa7.17□□□□□ -1.26
Usf1-210ENSMUST00000167546 Macf1Q9QXZ0 7354 aaKnown RBP7.12□□□□□ -1.27
Usf1-210ENSMUST00000167546 Mt1P02802 61 aaKnown RBP7.07□□□□□ -1.28
Usf1-210ENSMUST00000167546 Eppk1Q8R0W0 6548 aa7.05□□□□□ -1.28
Usf1-210ENSMUST00000167546 Gm2431E9Q8S1 172 aa7.02□□□□□ -1.29
Usf1-210ENSMUST00000167546 Gm45337A0A1B0GS71 263 aa7.01□□□□□ -1.29
Usf1-210ENSMUST00000167546 Kmt2dQ6PDK2 5588 aa7.01□□□□□ -1.29
Usf1-210ENSMUST00000167546 Lce3cQ91V05 98 aa6.98□□□□□ -1.29
Usf1-210ENSMUST00000167546 Gm10153A0A1B0GRL1 320 aa6.94□□□□□ -1.3
Usf1-210ENSMUST00000167546 Krtap19-4Q925H7 84 aa6.9□□□□□ -1.31
Usf1-210ENSMUST00000167546 Lce3dE9Q8V1 98 aa6.86□□□□□ -1.31
Usf1-210ENSMUST00000167546 Gm40460A0A1B0GR10 244 aa6.77□□□□□ -1.33
Usf1-210ENSMUST00000167546 Gm7579A0A1B0GRJ4 243 aa6.77□□□□□ -1.33
Usf1-210ENSMUST00000167546 Krtap5-5Q2TA51 241 aa6.77□□□□□ -1.33
Usf1-210ENSMUST00000167546 Krtap5-4Q62220 223 aa6.77□□□□□ -1.33
Usf1-210ENSMUST00000167546 Hmcn1D3YXG0 5634 aa6.74□□□□□ -1.33
Usf1-210ENSMUST00000167546 Lce3eF8VQJ0 98 aa6.71□□□□□ -1.33
Usf1-210ENSMUST00000167546 Lce3fQ6PAI4 98 aa6.71□□□□□ -1.33
Usf1-210ENSMUST00000167546 4933428G20RikQ9D3X4 101 aa6.69□□□□□ -1.34
Usf1-210ENSMUST00000167546 Sprr2dO70555 85 aa6.65□□□□□ -1.34
Usf1-210ENSMUST00000167546 Gm11639A0A1D5RLM8 5808 aa6.62□□□□□ -1.35
Usf1-210ENSMUST00000167546 ObscnA2AAJ9 8891 aaKnown RBP6.61□□□□□ -1.35
Usf1-210ENSMUST00000167546 Gm39115A0A1B0GSH7 232 aa6.59□□□□□ -1.35
Usf1-210ENSMUST00000167546 Muc19Q6PZE0 7524 aa6.56□□□□□ -1.36
Usf1-210ENSMUST00000167546 Mt3P28184 68 aa6.5□□□□□ -1.37
Usf1-210ENSMUST00000167546 Lce3aQ497I5 98 aa6.43□□□□□ -1.38
Usf1-210ENSMUST00000167546 DstQ91ZU6 7393 aaKnown RBP6.31□□□□□ -1.4
Usf1-210ENSMUST00000167546 Gpr98Q8VHN7 6298 aaKnown RBP6.27□□□□□ -1.41
Usf1-210ENSMUST00000167546 A0A1Y7VLE6 161 aa6.18□□□□□ -1.42
Usf1-210ENSMUST00000167546 Gm10100J3QK64 120 aa6.18□□□□□ -1.42
Usf1-210ENSMUST00000167546 Sprr2fO70557 76 aa6.12□□□□□ -1.43
Usf1-210ENSMUST00000167546 Krtap4-16Q91W93 202 aa6.07□□□□□ -1.44
Usf1-210ENSMUST00000167546 Gm45618A0A1B0GSA0 219 aa6.04□□□□□ -1.44
Usf1-210ENSMUST00000167546 NebE9Q1W3 7152 aa6.01□□□□□ -1.45
Usf1-210ENSMUST00000167546 AhnakE9Q616 5656 aaKnown RBP5.94□□□□□ -1.46
Usf1-210ENSMUST00000167546 Gm10142J3KMP7 120 aa5.93□□□□□ -1.46
Usf1-210ENSMUST00000167546 Sprr2eO70556 76 aa5.77□□□□□ -1.49
Usf1-210ENSMUST00000167546 Sprr2hO70559 108 aa5.76□□□□□ -1.49
Usf1-210ENSMUST00000167546 Gm10024A0A0A0MQA4 119 aa5.61□□□□□ -1.51
Usf1-210ENSMUST00000167546 Krtap31-1Q9D644 177 aa5.28□□□□□ -1.56
Usf1-210ENSMUST00000167546 A0A1Y7VJ07 166 aa5.16□□□□□ -1.58
Usf1-210ENSMUST00000167546 1110025L11RikO09048 78 aa5.14□□□□□ -1.59
Usf1-210ENSMUST00000167546 Krtap6-5Q925H3 78 aa5.14□□□□□ -1.59
Usf1-210ENSMUST00000167546 Gm7544A0A1Y7VJ58 118 aa5.09□□□□□ -1.6
Usf1-210ENSMUST00000167546 Muc16A0A140LJ72 8478 aa5.02□□□□□ -1.61
Usf1-210ENSMUST00000167546 Gm29735A0A1B0GT06 219 aa5.01□□□□□ -1.61
Usf1-210ENSMUST00000167546 A0A286YCP9 139 aa4.84□□□□□ -1.63
Usf1-210ENSMUST00000167546 Gm11567Q9D141 195 aa4.76□□□□□ -1.65
Usf1-210ENSMUST00000167546 Krtap28-10A0A1Y7VP58 119 aa4.62□□□□□ -1.67
Usf1-210ENSMUST00000167546 Gm10229O08631 77 aa4.61□□□□□ -1.67
Usf1-210ENSMUST00000167546 A030003K21RikA0A1Y7VIM3 128 aa4.58□□□□□ -1.68
Usf1-210ENSMUST00000167546 Gm6217A0A1Y7VJK9 128 aa4.58□□□□□ -1.68
Usf1-210ENSMUST00000167546 A030005K14RikA0A1Y7VNY1 122 aa4.44□□□□□ -1.7
Usf1-210ENSMUST00000167546 Krtap28-13A0A087WQP5 138 aa4.31□□□□□ -1.72
Usf1-210ENSMUST00000167546 Krtap21-1Q925H4 128 aa4.16□□□□□ -1.74
Usf1-210ENSMUST00000167546 Sprr2bO70554 98 aa4.09□□□□□ -1.75
Usf1-210ENSMUST00000167546 Krtap6-2O08884 159 aa4.07□□□□□ -1.76
Usf1-210ENSMUST00000167546 Krtap31-2Q8CAY5 177 aa3.91□□□□□ -1.78
Usf1-210ENSMUST00000167546 Krtap5-1Q64507 230 aa3.67□□□□□ -1.82
Usf1-210ENSMUST00000167546 Phgr1Q8K0G7 91 aa3.46□□□□□ -1.86
Usf1-210ENSMUST00000167546 A030014E15RikA0A1Y7VJV2 120 aa3.4□□□□□ -1.87
Usf1-210ENSMUST00000167546 Gm4559A4IF42 199 aa2.89□□□□□ -1.95
Retrieved 80 of 22,080 RNA–protein pairs in 62.9 ms