RNA–Protein interactions for RNA: ENSMUST00000161241.7

Usf1-208, Transcript of Upstream stimulatory factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usf1, Length 2,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1-208ENSMUST00000161241 Krtap4-8B1AQA8 209 aa4.76□□□□□ -1.65
Usf1-208ENSMUST00000161241 A0A1Y7VLE6 161 aa4.69□□□□□ -1.66
Usf1-208ENSMUST00000161241 Krtap4-9B1AQA9 244 aa4.62□□□□□ -1.67
Usf1-208ENSMUST00000161241 Gm10272F7CZ33 110 aa4.6□□□□□ -1.67
Usf1-208ENSMUST00000161241 A030005K14RikA0A1Y7VNY1 122 aa4.57□□□□□ -1.68
Usf1-208ENSMUST00000161241 2300003K06RikA2A4M0 262 aa4.57□□□□□ -1.68
Usf1-208ENSMUST00000161241 Krtap22-2J3QNX6 67 aa4.57□□□□□ -1.68
Usf1-208ENSMUST00000161241 Mt4P47945 62 aa4.56□□□□□ -1.68
Usf1-208ENSMUST00000161241 Gm10142J3KMP7 120 aa4.54□□□□□ -1.68
Usf1-208ENSMUST00000161241 Fsip2A2ARZ3 6995 aa4.52□□□□□ -1.69
Usf1-208ENSMUST00000161241 Krtap28-13A0A087WQP5 138 aa4.47□□□□□ -1.69
Usf1-208ENSMUST00000161241 Lce1cQ9D1C5 147 aa4.46□□□□□ -1.7
Usf1-208ENSMUST00000161241 A030014E15RikA0A1Y7VJV2 120 aa4.46□□□□□ -1.7
Usf1-208ENSMUST00000161241 Krtap4-13Q9D7P3 165 aa4.46□□□□□ -1.7
Usf1-208ENSMUST00000161241 Krtap28-10A0A1Y7VP58 119 aa4.44□□□□□ -1.7
Usf1-208ENSMUST00000161241 Krtap19-4Q925H7 84 aa4.44□□□□□ -1.7
Usf1-208ENSMUST00000161241 Krtap6-3A0A087WQL6 57 aa4.38□□□□□ -1.71
Usf1-208ENSMUST00000161241 Sprr2kO70562 68 aa4.37□□□□□ -1.71
Usf1-208ENSMUST00000161241 Lce3bQ9CQM7 98 aa4.35□□□□□ -1.71
Usf1-208ENSMUST00000161241 Sprr2iO70560 76 aa4.34□□□□□ -1.72
Usf1-208ENSMUST00000161241 Lce1fB9EJP6 147 aa4.3□□□□□ -1.72
Usf1-208ENSMUST00000161241 A0A1Y7VJ07 166 aa4.29□□□□□ -1.72
Usf1-208ENSMUST00000161241 A0A1Y7VJH8 109 aa4.22□□□□□ -1.73
Usf1-208ENSMUST00000161241 Sprr2hO70559 108 aa4.19□□□□□ -1.74
Usf1-208ENSMUST00000161241 Lce1kJ3QP15 125 aa4.19□□□□□ -1.74
Usf1-208ENSMUST00000161241 Sprr2eO70556 76 aa4.17□□□□□ -1.74
Usf1-208ENSMUST00000161241 Lce3cQ91V05 98 aa4.17□□□□□ -1.74
Usf1-208ENSMUST00000161241 Lce3dE9Q8V1 98 aa4.16□□□□□ -1.74
Usf1-208ENSMUST00000161241 Sprr2fO70557 76 aa4.11□□□□□ -1.75
Usf1-208ENSMUST00000161241 Lce3eF8VQJ0 98 aa4.08□□□□□ -1.76
Usf1-208ENSMUST00000161241 Lce3fQ6PAI4 98 aa4.08□□□□□ -1.76
Usf1-208ENSMUST00000161241 Lce3aQ497I5 98 aa4.01□□□□□ -1.77
Usf1-208ENSMUST00000161241 Syne1Q6ZWR6 8799 aa4.01□□□□□ -1.77
Usf1-208ENSMUST00000161241 Krtap20-2E9Q0A8 60 aa3.99□□□□□ -1.77
Usf1-208ENSMUST00000161241 Mt3P28184 68 aa3.95□□□□□ -1.78
Usf1-208ENSMUST00000161241 Gm7544A0A1Y7VJ58 118 aa3.93□□□□□ -1.78
Usf1-208ENSMUST00000161241 Eppk1Q8R0W0 6548 aa3.87□□□□□ -1.79
Usf1-208ENSMUST00000161241 ObscnA2AAJ9 8891 aaKnown RBP3.83□□□□□ -1.8
Usf1-208ENSMUST00000161241 Krtap9-1Q64526 186 aa3.78□□□□□ -1.8
Usf1-208ENSMUST00000161241 A0A286YCP9 139 aa3.78□□□□□ -1.81
Usf1-208ENSMUST00000161241 Krtap5-2Q9D5Z7 189 aa3.76□□□□□ -1.81
Usf1-208ENSMUST00000161241 Mt1P02802 61 aaKnown RBP3.72□□□□□ -1.81
Usf1-208ENSMUST00000161241 Krtap4-16Q91W93 202 aa3.71□□□□□ -1.82
Usf1-208ENSMUST00000161241 Gm11554B1AQB2 190 aa3.67□□□□□ -1.82
Usf1-208ENSMUST00000161241 Gm11568A2A4M2 211 aa3.64□□□□□ -1.83
Usf1-208ENSMUST00000161241 A030005L19RikA0A1Y7VIU2 113 aa3.61□□□□□ -1.83
Usf1-208ENSMUST00000161241 Macf1Q9QXZ0 7354 aaKnown RBP3.6□□□□□ -1.83
Usf1-208ENSMUST00000161241 Gm4553A0A1B0GSA9 284 aa3.59□□□□□ -1.84
Usf1-208ENSMUST00000161241 Kmt2dQ6PDK2 5588 aa3.52□□□□□ -1.85
Usf1-208ENSMUST00000161241 A030003K21RikA0A1Y7VIM3 128 aa3.49□□□□□ -1.85
Usf1-208ENSMUST00000161241 Gm6217A0A1Y7VJK9 128 aa3.49□□□□□ -1.85
Usf1-208ENSMUST00000161241 Gm2431E9Q8S1 172 aa3.49□□□□□ -1.85
Usf1-208ENSMUST00000161241 Gm11639A0A1D5RLM8 5808 aa3.49□□□□□ -1.85
Usf1-208ENSMUST00000161241 Gm10024A0A0A0MQA4 119 aa3.49□□□□□ -1.85
Usf1-208ENSMUST00000161241 Gm45337A0A1B0GS71 263 aa3.43□□□□□ -1.86
Usf1-208ENSMUST00000161241 Gpr98Q8VHN7 6298 aaKnown RBP3.43□□□□□ -1.86
Usf1-208ENSMUST00000161241 Muc19Q6PZE0 7524 aa3.38□□□□□ -1.87
Usf1-208ENSMUST00000161241 Gm10153A0A1B0GRL1 320 aa3.36□□□□□ -1.87
Usf1-208ENSMUST00000161241 Hmcn1D3YXG0 5634 aa3.36□□□□□ -1.87
Usf1-208ENSMUST00000161241 Gm11567Q9D141 195 aa3.31□□□□□ -1.88
Usf1-208ENSMUST00000161241 Gm40460A0A1B0GR10 244 aa3.3□□□□□ -1.88
Usf1-208ENSMUST00000161241 Gm7579A0A1B0GRJ4 243 aa3.3□□□□□ -1.88
Usf1-208ENSMUST00000161241 Krtap5-5Q2TA51 241 aa3.3□□□□□ -1.88
Usf1-208ENSMUST00000161241 Krtap5-4Q62220 223 aa3.3□□□□□ -1.88
Usf1-208ENSMUST00000161241 Gm39115A0A1B0GSH7 232 aa3.25□□□□□ -1.89
Usf1-208ENSMUST00000161241 DstQ91ZU6 7393 aaKnown RBP3.19□□□□□ -1.9
Usf1-208ENSMUST00000161241 NebE9Q1W3 7152 aa3.09□□□□□ -1.91
Usf1-208ENSMUST00000161241 Gm45618A0A1B0GSA0 219 aa3.02□□□□□ -1.93
Usf1-208ENSMUST00000161241 AhnakE9Q616 5656 aaKnown RBP2.97□□□□□ -1.93
Usf1-208ENSMUST00000161241 1110025L11RikO09048 78 aa2.92□□□□□ -1.94
Usf1-208ENSMUST00000161241 Krtap6-5Q925H3 78 aa2.92□□□□□ -1.94
Usf1-208ENSMUST00000161241 Gm29735A0A1B0GT06 219 aa2.91□□□□□ -1.94
Usf1-208ENSMUST00000161241 Muc16A0A140LJ72 8478 aa2.91□□□□□ -1.94
Usf1-208ENSMUST00000161241 Sprr2bO70554 98 aa2.85□□□□□ -1.95
Usf1-208ENSMUST00000161241 Gm10229O08631 77 aa2.57□□□□□ -2
Usf1-208ENSMUST00000161241 Gm4559A4IF42 199 aa2.53□□□□□ -2
Usf1-208ENSMUST00000161241 Phgr1Q8K0G7 91 aa2.45□□□□□ -2.02
Usf1-208ENSMUST00000161241 Krtap21-1Q925H4 128 aa2.42□□□□□ -2.02
Usf1-208ENSMUST00000161241 Krtap5-1Q64507 230 aa2.21□□□□□ -2.06
Usf1-208ENSMUST00000161241 Krtap6-2O08884 159 aa2.12□□□□□ -2.07
Retrieved 80 of 22,080 RNA–protein pairs in 121.2 ms