RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 A030005K14RikA0A1Y7VNY1 122 aa4.85□□□□□ -1.63
Ercc1-203ENSMUST00000160369 Sprr2iO70560 76 aa4.83□□□□□ -1.64
Ercc1-203ENSMUST00000160369 Lce1eQ9D139 143 aa4.83□□□□□ -1.64
Ercc1-203ENSMUST00000160369 Tnp1P10856 55 aa4.82□□□□□ -1.64
Ercc1-203ENSMUST00000160369 Gm10272F7CZ33 110 aa4.8□□□□□ -1.64
Ercc1-203ENSMUST00000160369 Lce3bQ9CQM7 98 aa4.79□□□□□ -1.64
Ercc1-203ENSMUST00000160369 Krtap5-2Q9D5Z7 189 aa4.79□□□□□ -1.64
Ercc1-203ENSMUST00000160369 Gm40193A0A1B0GT39 78 aa4.76□□□□□ -1.65
Ercc1-203ENSMUST00000160369 Lce1kJ3QP15 125 aa4.76□□□□□ -1.65
Ercc1-203ENSMUST00000160369 Syne1Q6ZWR6 8799 aa4.7□□□□□ -1.66
Ercc1-203ENSMUST00000160369 Krtap31-2Q8CAY5 177 aa4.66□□□□□ -1.66
Ercc1-203ENSMUST00000160369 Gm11559Q9D3H7 191 aa4.63□□□□□ -1.67
Ercc1-203ENSMUST00000160369 Gm11568A2A4M2 211 aa4.59□□□□□ -1.67
Ercc1-203ENSMUST00000160369 Krtap9-1Q64526 186 aa4.59□□□□□ -1.67
Ercc1-203ENSMUST00000160369 Gm4553A0A1B0GSA9 284 aa4.55□□□□□ -1.68
Ercc1-203ENSMUST00000160369 A030005L19RikA0A1Y7VIU2 113 aa4.54□□□□□ -1.68
Ercc1-203ENSMUST00000160369 Lce1fB9EJP6 147 aa4.54□□□□□ -1.68
Ercc1-203ENSMUST00000160369 Lce1cQ9D1C5 147 aa4.54□□□□□ -1.68
Ercc1-203ENSMUST00000160369 Gm20538F6Z9R1 75 aa4.52□□□□□ -1.69
Ercc1-203ENSMUST00000160369 Eppk1Q8R0W0 6548 aa4.51□□□□□ -1.69
Ercc1-203ENSMUST00000160369 Gm11554B1AQB2 190 aa4.49□□□□□ -1.69
Ercc1-203ENSMUST00000160369 Mp68P56379 58 aa4.49□□□□□ -1.69
Ercc1-203ENSMUST00000160369 Gm11938Q9D3H4 131 aa4.49□□□□□ -1.69
Ercc1-203ENSMUST00000160369 Macf1Q9QXZ0 7354 aaKnown RBP4.45□□□□□ -1.7
Ercc1-203ENSMUST00000160369 A0A1Y7VJ07 166 aa4.44□□□□□ -1.7
Ercc1-203ENSMUST00000160369 Kmt2dQ6PDK2 5588 aa4.43□□□□□ -1.7
Ercc1-203ENSMUST00000160369 Mt1P02802 61 aaKnown RBP4.39□□□□□ -1.71
Ercc1-203ENSMUST00000160369 Gm45337A0A1B0GS71 263 aa4.38□□□□□ -1.71
Ercc1-203ENSMUST00000160369 A030014E15RikA0A1Y7VJV2 120 aa4.38□□□□□ -1.71
Ercc1-203ENSMUST00000160369 Gm7544A0A1Y7VJ58 118 aa4.37□□□□□ -1.71
Ercc1-203ENSMUST00000160369 Gm2431E9Q8S1 172 aa4.37□□□□□ -1.71
Ercc1-203ENSMUST00000160369 Lce3cQ91V05 98 aa4.35□□□□□ -1.71
Ercc1-203ENSMUST00000160369 Krtap31-1Q9D644 177 aa4.35□□□□□ -1.71
Ercc1-203ENSMUST00000160369 Krtap19-4Q925H7 84 aa4.34□□□□□ -1.71
Ercc1-203ENSMUST00000160369 Gm10153A0A1B0GRL1 320 aa4.31□□□□□ -1.72
Ercc1-203ENSMUST00000160369 Lce3dE9Q8V1 98 aa4.28□□□□□ -1.72
Ercc1-203ENSMUST00000160369 Gm40460A0A1B0GR10 244 aa4.24□□□□□ -1.73
Ercc1-203ENSMUST00000160369 Gm7579A0A1B0GRJ4 243 aa4.24□□□□□ -1.73
Ercc1-203ENSMUST00000160369 Krtap5-5Q2TA51 241 aa4.24□□□□□ -1.73
Ercc1-203ENSMUST00000160369 Krtap5-4Q62220 223 aa4.24□□□□□ -1.73
Ercc1-203ENSMUST00000160369 Hmcn1D3YXG0 5634 aa4.22□□□□□ -1.73
Ercc1-203ENSMUST00000160369 Gm11639A0A1D5RLM8 5808 aa4.21□□□□□ -1.74
Ercc1-203ENSMUST00000160369 Lce3eF8VQJ0 98 aa4.17□□□□□ -1.74
Ercc1-203ENSMUST00000160369 Lce3fQ6PAI4 98 aa4.17□□□□□ -1.74
Ercc1-203ENSMUST00000160369 Gm39115A0A1B0GSH7 232 aa4.13□□□□□ -1.75
Ercc1-203ENSMUST00000160369 Muc19Q6PZE0 7524 aa4.12□□□□□ -1.75
Ercc1-203ENSMUST00000160369 4933428G20RikQ9D3X4 101 aa4.11□□□□□ -1.75
Ercc1-203ENSMUST00000160369 Sprr2dO70555 85 aa4.1□□□□□ -1.75
Ercc1-203ENSMUST00000160369 Mt3P28184 68 aa4.08□□□□□ -1.76
Ercc1-203ENSMUST00000160369 ObscnA2AAJ9 8891 aaKnown RBP4.05□□□□□ -1.76
Ercc1-203ENSMUST00000160369 Ndufaf8A2AMZ4 74 aa4.04□□□□□ -1.76
Ercc1-203ENSMUST00000160369 DstQ91ZU6 7393 aaKnown RBP4□□□□□ -1.77
Ercc1-203ENSMUST00000160369 Lce3aQ497I5 98 aa3.99□□□□□ -1.77
Ercc1-203ENSMUST00000160369 Gpr98Q8VHN7 6298 aaKnown RBP3.93□□□□□ -1.78
Ercc1-203ENSMUST00000160369 Sprr2fO70557 76 aa3.89□□□□□ -1.79
Ercc1-203ENSMUST00000160369 Gm10100J3QK64 120 aa3.87□□□□□ -1.79
Ercc1-203ENSMUST00000160369 Krtap4-16Q91W93 202 aa3.83□□□□□ -1.8
Ercc1-203ENSMUST00000160369 Gm45618A0A1B0GSA0 219 aa3.81□□□□□ -1.8
Ercc1-203ENSMUST00000160369 NebE9Q1W3 7152 aa3.8□□□□□ -1.8
Ercc1-203ENSMUST00000160369 Gm9112A2AI92 75 aa3.77□□□□□ -1.81
Ercc1-203ENSMUST00000160369 AhnakE9Q616 5656 aaKnown RBP3.76□□□□□ -1.81
Ercc1-203ENSMUST00000160369 Gm10142J3KMP7 120 aa3.67□□□□□ -1.82
Ercc1-203ENSMUST00000160369 A030003K21RikA0A1Y7VIM3 128 aa3.64□□□□□ -1.83
Ercc1-203ENSMUST00000160369 Sprr2eO70556 76 aa3.61□□□□□ -1.83
Ercc1-203ENSMUST00000160369 Sprr2hO70559 108 aa3.53□□□□□ -1.84
Ercc1-203ENSMUST00000160369 Gm10024A0A0A0MQA4 119 aa3.52□□□□□ -1.85
Ercc1-203ENSMUST00000160369 A0A286YCP9 139 aa3.49□□□□□ -1.85
Ercc1-203ENSMUST00000160369 Gm6217A0A1Y7VJK9 128 aa3.48□□□□□ -1.85
Ercc1-203ENSMUST00000160369 1110025L11RikO09048 78 aa3.2□□□□□ -1.9
Ercc1-203ENSMUST00000160369 Krtap6-5Q925H3 78 aa3.2□□□□□ -1.9
Ercc1-203ENSMUST00000160369 Gm29735A0A1B0GT06 219 aa3.14□□□□□ -1.91
Ercc1-203ENSMUST00000160369 Muc16A0A140LJ72 8478 aa3.09□□□□□ -1.91
Ercc1-203ENSMUST00000160369 Gm11567Q9D141 195 aa2.95□□□□□ -1.94
Ercc1-203ENSMUST00000160369 Gm10229O08631 77 aa2.87□□□□□ -1.95
Ercc1-203ENSMUST00000160369 Sprr2bO70554 98 aa2.6□□□□□ -1.99
Ercc1-203ENSMUST00000160369 Krtap21-1Q925H4 128 aa2.58□□□□□ -2
Ercc1-203ENSMUST00000160369 Krtap6-2O08884 159 aa2.54□□□□□ -2
Ercc1-203ENSMUST00000160369 Krtap5-1Q64507 230 aa2.3□□□□□ -2.04
Ercc1-203ENSMUST00000160369 Phgr1Q8K0G7 91 aa2.13□□□□□ -2.07
Ercc1-203ENSMUST00000160369 Gm4559A4IF42 199 aa1.82□□□□□ -2.12
Retrieved 80 of 22,080 RNA–protein pairs in 7.8 ms