RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Lce1a1Q9CQH5 143 aa3.98□□□□□ -1.77
Pcdh1-202ENSMUST00000159405 Krtap4-1Q3UUY3 169 aa3.95□□□□□ -1.78
Pcdh1-202ENSMUST00000159405 Lce1gQ9D195 139 aa3.92□□□□□ -1.78
Pcdh1-202ENSMUST00000159405 Lce3eF8VQJ0 98 aa3.91□□□□□ -1.78
Pcdh1-202ENSMUST00000159405 Lce3fQ6PAI4 98 aa3.91□□□□□ -1.78
Pcdh1-202ENSMUST00000159405 Muc5bE9Q5I3 4800 aa3.91□□□□□ -1.78
Pcdh1-202ENSMUST00000159405 ObscnA2AAJ9 8891 aaKnown RBP3.89□□□□□ -1.79
Pcdh1-202ENSMUST00000159405 Lce1bQ9D149 137 aa3.87□□□□□ -1.79
Pcdh1-202ENSMUST00000159405 Sprr2fO70557 76 aa3.87□□□□□ -1.79
Pcdh1-202ENSMUST00000159405 Krtap4-9B1AQA9 244 aa3.87□□□□□ -1.79
Pcdh1-202ENSMUST00000159405 Krtap19-4Q925H7 84 aa3.86□□□□□ -1.79
Pcdh1-202ENSMUST00000159405 Lce3aQ497I5 98 aa3.85□□□□□ -1.79
Pcdh1-202ENSMUST00000159405 Krtap4-16Q91W93 202 aa3.84□□□□□ -1.79
Pcdh1-202ENSMUST00000159405 Lce1lQ9D1G7 135 aa3.83□□□□□ -1.8
Pcdh1-202ENSMUST00000159405 Gm11596B1AQB0 205 aa3.83□□□□□ -1.8
Pcdh1-202ENSMUST00000159405 Gm11564A2A4L9 201 aa3.82□□□□□ -1.8
Pcdh1-202ENSMUST00000159405 Gm11563B1AQ90 168 aa3.82□□□□□ -1.8
Pcdh1-202ENSMUST00000159405 Gm11595B1AQA7 289 aa3.82□□□□□ -1.8
Pcdh1-202ENSMUST00000159405 Krtap4-8B1AQA8 209 aa3.82□□□□□ -1.8
Pcdh1-202ENSMUST00000159405 Gm11562A0PK51 136 aa3.8□□□□□ -1.8
Pcdh1-202ENSMUST00000159405 Krtap4-13Q9D7P3 165 aa3.8□□□□□ -1.8
Pcdh1-202ENSMUST00000159405 Muc19Q6PZE0 7524 aa3.78□□□□□ -1.8
Pcdh1-202ENSMUST00000159405 Sprr2hO70559 108 aa3.75□□□□□ -1.81
Pcdh1-202ENSMUST00000159405 2300003K06RikA2A4M0 262 aa3.74□□□□□ -1.81
Pcdh1-202ENSMUST00000159405 Krtap31-2Q8CAY5 177 aa3.74□□□□□ -1.81
Pcdh1-202ENSMUST00000159405 Sprr2eO70556 76 aa3.71□□□□□ -1.82
Pcdh1-202ENSMUST00000159405 DstQ91ZU6 7393 aaKnown RBP3.68□□□□□ -1.82
Pcdh1-202ENSMUST00000159405 Krtap4-7Q9D732 168 aa3.66□□□□□ -1.82
Pcdh1-202ENSMUST00000159405 Lce1kJ3QP15 125 aa3.58□□□□□ -1.84
Pcdh1-202ENSMUST00000159405 NebE9Q1W3 7152 aa3.55□□□□□ -1.84
Pcdh1-202ENSMUST00000159405 Gm10024A0A0A0MQA4 119 aa3.41□□□□□ -1.86
Pcdh1-202ENSMUST00000159405 Gm11554B1AQB2 190 aa3.34□□□□□ -1.87
Pcdh1-202ENSMUST00000159405 Krtap20-2E9Q0A8 60 aa3.31□□□□□ -1.88
Pcdh1-202ENSMUST00000159405 Gm11555B1AQ89 175 aa3.24□□□□□ -1.89
Pcdh1-202ENSMUST00000159405 Krtap6-3A0A087WQL6 57 aa3.1□□□□□ -1.91
Pcdh1-202ENSMUST00000159405 Kmt2dQ6PDK2 5588 aa3.05□□□□□ -1.92
Pcdh1-202ENSMUST00000159405 Mt1P02802 61 aaKnown RBP3.04□□□□□ -1.92
Pcdh1-202ENSMUST00000159405 Mt3P28184 68 aa3.01□□□□□ -1.93
Pcdh1-202ENSMUST00000159405 Hmcn1D3YXG0 5634 aa2.85□□□□□ -1.95
Pcdh1-202ENSMUST00000159405 Gm11639A0A1D5RLM8 5808 aa2.82□□□□□ -1.96
Pcdh1-202ENSMUST00000159405 Gm11568A2A4M2 211 aa2.78□□□□□ -1.96
Pcdh1-202ENSMUST00000159405 Krtap9-1Q64526 186 aa2.78□□□□□ -1.96
Pcdh1-202ENSMUST00000159405 Gpr98Q8VHN7 6298 aaKnown RBP2.76□□□□□ -1.97
Pcdh1-202ENSMUST00000159405 Eppk1Q8R0W0 6548 aa2.69□□□□□ -1.98
Pcdh1-202ENSMUST00000159405 Sprr2bO70554 98 aa2.6□□□□□ -1.99
Pcdh1-202ENSMUST00000159405 Gm11559Q9D3H7 191 aa2.58□□□□□ -2
Pcdh1-202ENSMUST00000159405 1110025L11RikO09048 78 aa2.46□□□□□ -2.02
Pcdh1-202ENSMUST00000159405 Krtap6-5Q925H3 78 aa2.46□□□□□ -2.02
Pcdh1-202ENSMUST00000159405 Krtap5-2Q9D5Z7 189 aa2.41□□□□□ -2.02
Pcdh1-202ENSMUST00000159405 A0A1Y7VLE6 161 aa2.4□□□□□ -2.03
Pcdh1-202ENSMUST00000159405 A0A1Y7VJH8 109 aa2.36□□□□□ -2.03
Pcdh1-202ENSMUST00000159405 Phgr1Q8K0G7 91 aa2.34□□□□□ -2.03
Pcdh1-202ENSMUST00000159405 Gm10153A0A1B0GRL1 320 aa2.31□□□□□ -2.04
Pcdh1-202ENSMUST00000159405 Gm2431E9Q8S1 172 aa2.25□□□□□ -2.05
Pcdh1-202ENSMUST00000159405 AhnakE9Q616 5656 aaKnown RBP2.25□□□□□ -2.05
Pcdh1-202ENSMUST00000159405 Gm4553A0A1B0GSA9 284 aa2.24□□□□□ -2.05
Pcdh1-202ENSMUST00000159405 Gm10229O08631 77 aa2.21□□□□□ -2.06
Pcdh1-202ENSMUST00000159405 Gm45337A0A1B0GS71 263 aa2.02□□□□□ -2.09
Pcdh1-202ENSMUST00000159405 Krtap21-1Q925H4 128 aa1.98□□□□□ -2.09
Pcdh1-202ENSMUST00000159405 A030005L19RikA0A1Y7VIU2 113 aa1.96□□□□□ -2.1
Pcdh1-202ENSMUST00000159405 Gm40460A0A1B0GR10 244 aa1.94□□□□□ -2.1
Pcdh1-202ENSMUST00000159405 Gm7579A0A1B0GRJ4 243 aa1.94□□□□□ -2.1
Pcdh1-202ENSMUST00000159405 Krtap5-5Q2TA51 241 aa1.94□□□□□ -2.1
Pcdh1-202ENSMUST00000159405 Krtap5-4Q62220 223 aa1.94□□□□□ -2.1
Pcdh1-202ENSMUST00000159405 A0A286YCP9 139 aa1.87□□□□□ -2.11
Pcdh1-202ENSMUST00000159405 Krtap6-2O08884 159 aa1.87□□□□□ -2.11
Pcdh1-202ENSMUST00000159405 Gm11567Q9D141 195 aa1.85□□□□□ -2.11
Pcdh1-202ENSMUST00000159405 Gm39115A0A1B0GSH7 232 aa1.78□□□□□ -2.13
Pcdh1-202ENSMUST00000159405 A0A1Y7VJ07 166 aa1.69□□□□□ -2.14
Pcdh1-202ENSMUST00000159405 Gm45618A0A1B0GSA0 219 aa1.54□□□□□ -2.16
Pcdh1-202ENSMUST00000159405 Gm29735A0A1B0GT06 219 aa1.46□□□□□ -2.18
Pcdh1-202ENSMUST00000159405 Krtap5-1Q64507 230 aa1.2□□□□□ -2.22
Pcdh1-202ENSMUST00000159405 A030003K21RikA0A1Y7VIM3 128 aa1.09□□□□□ -2.23
Pcdh1-202ENSMUST00000159405 Krtap28-13A0A087WQP5 138 aa1.06□□□□□ -2.24
Pcdh1-202ENSMUST00000159405 A030005K14RikA0A1Y7VNY1 122 aa1□□□□□ -2.25
Pcdh1-202ENSMUST00000159405 Krtap28-10A0A1Y7VP58 119 aa0.95□□□□□ -2.26
Pcdh1-202ENSMUST00000159405 A030014E15RikA0A1Y7VJV2 120 aa0.9□□□□□ -2.27
Pcdh1-202ENSMUST00000159405 Gm6217A0A1Y7VJK9 128 aa0.88□□□□□ -2.27
Pcdh1-202ENSMUST00000159405 Gm4559A4IF42 199 aa0.86□□□□□ -2.27
Pcdh1-202ENSMUST00000159405 Gm7544A0A1Y7VJ58 118 aa0.84□□□□□ -2.28
Retrieved 80 of 22,080 RNA–protein pairs in 77.2 ms