RNA–Protein interactions for RNA: ENSMUST00000122063.7

Ift88-201, Transcript of Intraflagellar transport protein 88 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ift88, Length 3,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88-201ENSMUST00000122063 Gm38119A0A0A6YX29 146 aa3.57□□□□□ -1.84
Ift88-201ENSMUST00000122063 Mt4P47945 62 aa3.55□□□□□ -1.84
Ift88-201ENSMUST00000122063 Lce3bQ9CQM7 98 aa3.55□□□□□ -1.84
Ift88-201ENSMUST00000122063 Syne2Q6ZWQ0 6874 aaKnown RBP3.54□□□□□ -1.84
Ift88-201ENSMUST00000122063 Gm11596B1AQB0 205 aa3.53□□□□□ -1.84
Ift88-201ENSMUST00000122063 Gm10100J3QK64 120 aa3.52□□□□□ -1.85
Ift88-201ENSMUST00000122063 Gm11564A2A4L9 201 aa3.51□□□□□ -1.85
Ift88-201ENSMUST00000122063 Gm11595B1AQA7 289 aa3.51□□□□□ -1.85
Ift88-201ENSMUST00000122063 Krtap4-8B1AQA8 209 aa3.51□□□□□ -1.85
Ift88-201ENSMUST00000122063 Lce1fB9EJP6 147 aa3.47□□□□□ -1.85
Ift88-201ENSMUST00000122063 Lce1a1Q9CQH5 143 aa3.47□□□□□ -1.85
Ift88-201ENSMUST00000122063 Krtap4-9B1AQA9 244 aa3.46□□□□□ -1.86
Ift88-201ENSMUST00000122063 Krtap19-4Q925H7 84 aa3.45□□□□□ -1.86
Ift88-201ENSMUST00000122063 Gm10142J3KMP7 120 aa3.42□□□□□ -1.86
Ift88-201ENSMUST00000122063 Lce3cQ91V05 98 aa3.42□□□□□ -1.86
Ift88-201ENSMUST00000122063 A0A1Y7VJ07 166 aa3.4□□□□□ -1.86
Ift88-201ENSMUST00000122063 Krtap31-2Q8CAY5 177 aa3.4□□□□□ -1.87
Ift88-201ENSMUST00000122063 Lce3eF8VQJ0 98 aa3.39□□□□□ -1.87
Ift88-201ENSMUST00000122063 Lce3fQ6PAI4 98 aa3.39□□□□□ -1.87
Ift88-201ENSMUST00000122063 Sprr2kO70562 68 aa3.38□□□□□ -1.87
Ift88-201ENSMUST00000122063 Krtap4-13Q9D7P3 165 aa3.37□□□□□ -1.87
Ift88-201ENSMUST00000122063 2300003K06RikA2A4M0 262 aa3.35□□□□□ -1.87
Ift88-201ENSMUST00000122063 Lce1bQ9D149 137 aa3.33□□□□□ -1.88
Ift88-201ENSMUST00000122063 Lce3dE9Q8V1 98 aa3.32□□□□□ -1.88
Ift88-201ENSMUST00000122063 ObscnA2AAJ9 8891 aaKnown RBP3.29□□□□□ -1.88
Ift88-201ENSMUST00000122063 Krtap31-1Q9D644 177 aa3.29□□□□□ -1.88
Ift88-201ENSMUST00000122063 A030003K21RikA0A1Y7VIM3 128 aa3.26□□□□□ -1.89
Ift88-201ENSMUST00000122063 A030014E15RikA0A1Y7VJV2 120 aa3.25□□□□□ -1.89
Ift88-201ENSMUST00000122063 Lce1lQ9D1G7 135 aa3.25□□□□□ -1.89
Ift88-201ENSMUST00000122063 Gm6217A0A1Y7VJK9 128 aa3.24□□□□□ -1.89
Ift88-201ENSMUST00000122063 Lce1kJ3QP15 125 aa3.24□□□□□ -1.89
Ift88-201ENSMUST00000122063 Lce3aQ497I5 98 aa3.23□□□□□ -1.89
Ift88-201ENSMUST00000122063 Sprr2hO70559 108 aa3.22□□□□□ -1.89
Ift88-201ENSMUST00000122063 Sprr2iO70560 76 aa3.22□□□□□ -1.89
Ift88-201ENSMUST00000122063 A0A286YCP9 139 aa3.16□□□□□ -1.9
Ift88-201ENSMUST00000122063 Mt1P02802 61 aaKnown RBP3.15□□□□□ -1.9
Ift88-201ENSMUST00000122063 Macf1Q9QXZ0 7354 aaKnown RBP3.08□□□□□ -1.92
Ift88-201ENSMUST00000122063 Krtap20-2E9Q0A8 60 aa3.07□□□□□ -1.92
Ift88-201ENSMUST00000122063 Sprr2eO70556 76 aa3.06□□□□□ -1.92
Ift88-201ENSMUST00000122063 Gm11568A2A4M2 211 aa3.04□□□□□ -1.92
Ift88-201ENSMUST00000122063 Krtap9-1Q64526 186 aa3.04□□□□□ -1.92
Ift88-201ENSMUST00000122063 Muc16A0A140LJ72 8478 aa2.97□□□□□ -1.93
Ift88-201ENSMUST00000122063 Sprr2fO70557 76 aa2.96□□□□□ -1.93
Ift88-201ENSMUST00000122063 Krtap6-3A0A087WQL6 57 aa2.94□□□□□ -1.94
Ift88-201ENSMUST00000122063 Krtap4-16Q91W93 202 aa2.93□□□□□ -1.94
Ift88-201ENSMUST00000122063 Krtap5-2Q9D5Z7 189 aa2.89□□□□□ -1.95
Ift88-201ENSMUST00000122063 Gm10024A0A0A0MQA4 119 aa2.84□□□□□ -1.95
Ift88-201ENSMUST00000122063 Hmcn1D3YXG0 5634 aa2.82□□□□□ -1.96
Ift88-201ENSMUST00000122063 Kmt2dQ6PDK2 5588 aa2.8□□□□□ -1.96
Ift88-201ENSMUST00000122063 Mt3P28184 68 aa2.8□□□□□ -1.96
Ift88-201ENSMUST00000122063 Gm10153A0A1B0GRL1 320 aa2.79□□□□□ -1.96
Ift88-201ENSMUST00000122063 Gm11554B1AQB2 190 aa2.76□□□□□ -1.97
Ift88-201ENSMUST00000122063 Gm11559Q9D3H7 191 aa2.67□□□□□ -1.98
Ift88-201ENSMUST00000122063 Muc19Q6PZE0 7524 aa2.64□□□□□ -1.99
Ift88-201ENSMUST00000122063 Gm4553A0A1B0GSA9 284 aa2.64□□□□□ -1.99
Ift88-201ENSMUST00000122063 Gm2431E9Q8S1 172 aa2.6□□□□□ -1.99
Ift88-201ENSMUST00000122063 Gm45337A0A1B0GS71 263 aa2.6□□□□□ -1.99
Ift88-201ENSMUST00000122063 DstQ91ZU6 7393 aaKnown RBP2.52□□□□□ -2.01
Ift88-201ENSMUST00000122063 Gm40460A0A1B0GR10 244 aa2.51□□□□□ -2.01
Ift88-201ENSMUST00000122063 Gm7579A0A1B0GRJ4 243 aa2.51□□□□□ -2.01
Ift88-201ENSMUST00000122063 Krtap5-5Q2TA51 241 aa2.51□□□□□ -2.01
Ift88-201ENSMUST00000122063 Krtap5-4Q62220 223 aa2.51□□□□□ -2.01
Ift88-201ENSMUST00000122063 1110025L11RikO09048 78 aa2.41□□□□□ -2.02
Ift88-201ENSMUST00000122063 Krtap6-5Q925H3 78 aa2.41□□□□□ -2.02
Ift88-201ENSMUST00000122063 Gm11639A0A1D5RLM8 5808 aa2.41□□□□□ -2.02
Ift88-201ENSMUST00000122063 NebE9Q1W3 7152 aa2.35□□□□□ -2.03
Ift88-201ENSMUST00000122063 Gm45618A0A1B0GSA0 219 aa2.33□□□□□ -2.04
Ift88-201ENSMUST00000122063 Gm39115A0A1B0GSH7 232 aa2.31□□□□□ -2.04
Ift88-201ENSMUST00000122063 Eppk1Q8R0W0 6548 aa2.3□□□□□ -2.04
Ift88-201ENSMUST00000122063 AhnakE9Q616 5656 aaKnown RBP2.24□□□□□ -2.05
Ift88-201ENSMUST00000122063 Gm10229O08631 77 aa2.14□□□□□ -2.07
Ift88-201ENSMUST00000122063 Sprr2bO70554 98 aa2.11□□□□□ -2.07
Ift88-201ENSMUST00000122063 Gm29735A0A1B0GT06 219 aa2.09□□□□□ -2.07
Ift88-201ENSMUST00000122063 Gm11567Q9D141 195 aa2.08□□□□□ -2.08
Ift88-201ENSMUST00000122063 Gpr98Q8VHN7 6298 aaKnown RBP2.05□□□□□ -2.08
Ift88-201ENSMUST00000122063 Krtap21-1Q925H4 128 aa1.96□□□□□ -2.1
Ift88-201ENSMUST00000122063 Phgr1Q8K0G7 91 aa1.92□□□□□ -2.1
Ift88-201ENSMUST00000122063 Krtap6-2O08884 159 aa1.81□□□□□ -2.12
Ift88-201ENSMUST00000122063 Krtap5-1Q64507 230 aa1.62□□□□□ -2.15
Ift88-201ENSMUST00000122063 Gm4559A4IF42 199 aa1.55□□□□□ -2.16
Retrieved 80 of 22,080 RNA–protein pairs in 67.3 ms