RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Krtap4-9B1AQA9 244 aa7,49□□□□□ -1,21
Ubp1-203ENSMUST00000116492 Lce1fB9EJP6 147 aa7,48□□□□□ -1,21
Ubp1-203ENSMUST00000116492 Lce1a1Q9CQH5 143 aa7,48□□□□□ -1,21
Ubp1-203ENSMUST00000116492 Mt4P47945 62 aa7,43□□□□□ -1,22
Ubp1-203ENSMUST00000116492 Gm10142J3KMP7 120 aa7,41□□□□□ -1,22
Ubp1-203ENSMUST00000116492 Lce1bQ9D149 137 aa7,39□□□□□ -1,23
Ubp1-203ENSMUST00000116492 Gm38119A0A0A6YX29 146 aa7,33□□□□□ -1,24
Ubp1-203ENSMUST00000116492 Lce3cQ91V05 98 aa7,26□□□□□ -1,25
Ubp1-203ENSMUST00000116492 Lce3eF8VQJ0 98 aa7,23□□□□□ -1,25
Ubp1-203ENSMUST00000116492 Lce3fQ6PAI4 98 aa7,23□□□□□ -1,25
Ubp1-203ENSMUST00000116492 Krtap4-13Q9D7P3 165 aa7,23□□□□□ -1,25
Ubp1-203ENSMUST00000116492 Sprr2hO70559 108 aa7,19□□□□□ -1,26
Ubp1-203ENSMUST00000116492 Lce3dE9Q8V1 98 aa7,16□□□□□ -1,26
Ubp1-203ENSMUST00000116492 Sprr2iO70560 76 aa7,07□□□□□ -1,28
Ubp1-203ENSMUST00000116492 2300003K06RikA2A4M0 262 aa7,04□□□□□ -1,28
Ubp1-203ENSMUST00000116492 ObscnA2AAJ9 8891 aaKnown RBP7,01□□□□□ -1,29
Ubp1-203ENSMUST00000116492 Sprr2kO70562 68 aa7□□□□□ -1,29
Ubp1-203ENSMUST00000116492 Sprr2eO70556 76 aa6,98□□□□□ -1,29
Ubp1-203ENSMUST00000116492 Krtap6-3A0A087WQL6 57 aa6,97□□□□□ -1,29
Ubp1-203ENSMUST00000116492 Mt1P02802 61 aaKnown RBP6,94□□□□□ -1,3
Ubp1-203ENSMUST00000116492 Lce3aQ497I5 98 aa6,92□□□□□ -1,3
Ubp1-203ENSMUST00000116492 Lce1kJ3QP15 125 aa6,88□□□□□ -1,31
Ubp1-203ENSMUST00000116492 Lce1lQ9D1G7 135 aa6,88□□□□□ -1,31
Ubp1-203ENSMUST00000116492 Krtap4-7Q9D732 168 aa6,86□□□□□ -1,31
Ubp1-203ENSMUST00000116492 Sprr2fO70557 76 aa6,71□□□□□ -1,33
Ubp1-203ENSMUST00000116492 A0A1Y7VJH8 109 aa6,7□□□□□ -1,34
Ubp1-203ENSMUST00000116492 Gm11568A2A4M2 211 aa6,64□□□□□ -1,35
Ubp1-203ENSMUST00000116492 Krtap9-1Q64526 186 aa6,64□□□□□ -1,35
Ubp1-203ENSMUST00000116492 Krtap31-1Q9D644 177 aa6,58□□□□□ -1,36
Ubp1-203ENSMUST00000116492 Krtap5-2Q9D5Z7 189 aa6,54□□□□□ -1,36
Ubp1-203ENSMUST00000116492 Krtap20-2E9Q0A8 60 aa6,52□□□□□ -1,37
Ubp1-203ENSMUST00000116492 Krtap28-10A0A1Y7VP58 119 aa6,36□□□□□ -1,39
Ubp1-203ENSMUST00000116492 Gm10153A0A1B0GRL1 320 aa6,31□□□□□ -1,4
Ubp1-203ENSMUST00000116492 Mt3P28184 68 aa6,16□□□□□ -1,42
Ubp1-203ENSMUST00000116492 Krtap4-16Q91W93 202 aa6,13□□□□□ -1,43
Ubp1-203ENSMUST00000116492 Macf1Q9QXZ0 7354 aaKnown RBP6,12□□□□□ -1,43
Ubp1-203ENSMUST00000116492 A0A1Y7VLE6 161 aa6,11□□□□□ -1,43
Ubp1-203ENSMUST00000116492 Gm10024A0A0A0MQA4 119 aa6,1□□□□□ -1,43
Ubp1-203ENSMUST00000116492 Gm11559Q9D3H7 191 aa6,01□□□□□ -1,45
Ubp1-203ENSMUST00000116492 Krtap28-13A0A087WQP5 138 aa5,99□□□□□ -1,45
Ubp1-203ENSMUST00000116492 Gm4553A0A1B0GSA9 284 aa5,99□□□□□ -1,45
Ubp1-203ENSMUST00000116492 Gm45337A0A1B0GS71 263 aa5,98□□□□□ -1,45
Ubp1-203ENSMUST00000116492 A030005L19RikA0A1Y7VIU2 113 aa5,95□□□□□ -1,46
Ubp1-203ENSMUST00000116492 Gm11554B1AQB2 190 aa5,93□□□□□ -1,46
Ubp1-203ENSMUST00000116492 Eppk1Q8R0W0 6548 aa5,84□□□□□ -1,47
Ubp1-203ENSMUST00000116492 A030005K14RikA0A1Y7VNY1 122 aa5,83□□□□□ -1,48
Ubp1-203ENSMUST00000116492 Gm40460A0A1B0GR10 244 aa5,82□□□□□ -1,48
Ubp1-203ENSMUST00000116492 Gm7579A0A1B0GRJ4 243 aa5,82□□□□□ -1,48
Ubp1-203ENSMUST00000116492 Krtap5-5Q2TA51 241 aa5,82□□□□□ -1,48
Ubp1-203ENSMUST00000116492 Krtap5-4Q62220 223 aa5,82□□□□□ -1,48
Ubp1-203ENSMUST00000116492 Gm7544A0A1Y7VJ58 118 aa5,81□□□□□ -1,48
Ubp1-203ENSMUST00000116492 Hmcn1D3YXG0 5634 aa5,78□□□□□ -1,48
Ubp1-203ENSMUST00000116492 Gm2431E9Q8S1 172 aa5,77□□□□□ -1,49
Ubp1-203ENSMUST00000116492 Kmt2dQ6PDK2 5588 aa5,72□□□□□ -1,49
Ubp1-203ENSMUST00000116492 Muc19Q6PZE0 7524 aa5,56□□□□□ -1,52
Ubp1-203ENSMUST00000116492 Gm11639A0A1D5RLM8 5808 aa5,52□□□□□ -1,53
Ubp1-203ENSMUST00000116492 Muc16A0A140LJ72 8478 aa5,34□□□□□ -1,55
Ubp1-203ENSMUST00000116492 1110025L11RikO09048 78 aa5,33□□□□□ -1,56
Ubp1-203ENSMUST00000116492 Krtap6-5Q925H3 78 aa5,33□□□□□ -1,56
Ubp1-203ENSMUST00000116492 DstQ91ZU6 7393 aaKnown RBP5,32□□□□□ -1,56
Ubp1-203ENSMUST00000116492 Gm39115A0A1B0GSH7 232 aa5,32□□□□□ -1,56
Ubp1-203ENSMUST00000116492 A0A1Y7VJ07 166 aa5,17□□□□□ -1,58
Ubp1-203ENSMUST00000116492 Gpr98Q8VHN7 6298 aaKnown RBP5,08□□□□□ -1,6
Ubp1-203ENSMUST00000116492 A030003K21RikA0A1Y7VIM3 128 aa5,08□□□□□ -1,6
Ubp1-203ENSMUST00000116492 NebE9Q1W3 7152 aa5,08□□□□□ -1,6
Ubp1-203ENSMUST00000116492 A030014E15RikA0A1Y7VJV2 120 aa5,04□□□□□ -1,6
Ubp1-203ENSMUST00000116492 Krtap31-2Q8CAY5 177 aa5,02□□□□□ -1,61
Ubp1-203ENSMUST00000116492 Sprr2bO70554 98 aa4,93□□□□□ -1,62
Ubp1-203ENSMUST00000116492 A0A286YCP9 139 aa4,93□□□□□ -1,62
Ubp1-203ENSMUST00000116492 Gm6217A0A1Y7VJK9 128 aa4,91□□□□□ -1,62
Ubp1-203ENSMUST00000116492 AhnakE9Q616 5656 aaKnown RBP4,88□□□□□ -1,63
Ubp1-203ENSMUST00000116492 Gm45618A0A1B0GSA0 219 aa4,87□□□□□ -1,63
Ubp1-203ENSMUST00000116492 Gm10229O08631 77 aa4,71□□□□□ -1,66
Ubp1-203ENSMUST00000116492 Gm11567Q9D141 195 aa4,45□□□□□ -1,7
Ubp1-203ENSMUST00000116492 Gm29735A0A1B0GT06 219 aa4,42□□□□□ -1,7
Ubp1-203ENSMUST00000116492 Krtap21-1Q925H4 128 aa4,39□□□□□ -1,71
Ubp1-203ENSMUST00000116492 Phgr1Q8K0G7 91 aa4,24□□□□□ -1,73
Ubp1-203ENSMUST00000116492 Krtap6-2O08884 159 aa3,96□□□□□ -1,78
Ubp1-203ENSMUST00000116492 Krtap5-1Q64507 230 aa3□□□□□ -1,93
Ubp1-203ENSMUST00000116492 Gm4559A4IF42 199 aa2,53□□□□□ -2,01
Retrieved 80 of 22,080 RNA–protein pairs in 8,1 ms