RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Lce1eQ9D139 143 aa8,32□□□□□ -1,08
Tpm1-216ENSMUST00000113707 Fsip2A2ARZ3 6995 aa8,32□□□□□ -1,08
Tpm1-216ENSMUST00000113707 4933428G20RikQ9D3X4 101 aa8,21□□□□□ -1,09
Tpm1-216ENSMUST00000113707 Krtap19-4Q925H7 84 aa8,19□□□□□ -1,1
Tpm1-216ENSMUST00000113707 Lce1cQ9D1C5 147 aa8,12□□□□□ -1,11
Tpm1-216ENSMUST00000113707 Krtap4-7Q9D732 168 aa8,11□□□□□ -1,11
Tpm1-216ENSMUST00000113707 Krtap6-3A0A087WQL6 57 aa7,98□□□□□ -1,13
Tpm1-216ENSMUST00000113707 Gm9112A2AI92 75 aa7,97□□□□□ -1,13
Tpm1-216ENSMUST00000113707 Sprr2iO70560 76 aa7,94□□□□□ -1,14
Tpm1-216ENSMUST00000113707 Lce3cQ91V05 98 aa7,9□□□□□ -1,14
Tpm1-216ENSMUST00000113707 Lce1kJ3QP15 125 aa7,89□□□□□ -1,15
Tpm1-216ENSMUST00000113707 Lce1lQ9D1G7 135 aa7,88□□□□□ -1,15
Tpm1-216ENSMUST00000113707 A0A1Y7VJH8 109 aa7,85□□□□□ -1,15
Tpm1-216ENSMUST00000113707 Lce3dE9Q8V1 98 aa7,8□□□□□ -1,16
Tpm1-216ENSMUST00000113707 Gm10100J3QK64 120 aa7,79□□□□□ -1,16
Tpm1-216ENSMUST00000113707 Lce3eF8VQJ0 98 aa7,78□□□□□ -1,16
Tpm1-216ENSMUST00000113707 Lce3fQ6PAI4 98 aa7,78□□□□□ -1,16
Tpm1-216ENSMUST00000113707 Lce1fB9EJP6 147 aa7,77□□□□□ -1,17
Tpm1-216ENSMUST00000113707 Lce1a1Q9CQH5 143 aa7,77□□□□□ -1,17
Tpm1-216ENSMUST00000113707 Mt1P02802 61 aaKnown RBP7,72□□□□□ -1,17
Tpm1-216ENSMUST00000113707 Krtap20-2E9Q0A8 60 aa7,68□□□□□ -1,18
Tpm1-216ENSMUST00000113707 Krtap5-2Q9D5Z7 189 aa7,68□□□□□ -1,18
Tpm1-216ENSMUST00000113707 Gm11568A2A4M2 211 aa7,64□□□□□ -1,19
Tpm1-216ENSMUST00000113707 Krtap9-1Q64526 186 aa7,64□□□□□ -1,19
Tpm1-216ENSMUST00000113707 Gm10142J3KMP7 120 aa7,61□□□□□ -1,19
Tpm1-216ENSMUST00000113707 ObscnA2AAJ9 8891 aaKnown RBP7,58□□□□□ -1,2
Tpm1-216ENSMUST00000113707 Lce3aQ497I5 98 aa7,46□□□□□ -1,22
Tpm1-216ENSMUST00000113707 Sprr2hO70559 108 aa7,39□□□□□ -1,23
Tpm1-216ENSMUST00000113707 Gm10153A0A1B0GRL1 320 aa7,21□□□□□ -1,25
Tpm1-216ENSMUST00000113707 Gm4553A0A1B0GSA9 284 aa7,12□□□□□ -1,27
Tpm1-216ENSMUST00000113707 Gm11559Q9D3H7 191 aa7,11□□□□□ -1,27
Tpm1-216ENSMUST00000113707 Gm45337A0A1B0GS71 263 aa7,03□□□□□ -1,28
Tpm1-216ENSMUST00000113707 Sprr2eO70556 76 aa7,01□□□□□ -1,29
Tpm1-216ENSMUST00000113707 Mt3P28184 68 aa6,96□□□□□ -1,3
Tpm1-216ENSMUST00000113707 Krtap28-10A0A1Y7VP58 119 aa6,9□□□□□ -1,31
Tpm1-216ENSMUST00000113707 Gm2431E9Q8S1 172 aa6,87□□□□□ -1,31
Tpm1-216ENSMUST00000113707 Gm40460A0A1B0GR10 244 aa6,83□□□□□ -1,32
Tpm1-216ENSMUST00000113707 Gm7579A0A1B0GRJ4 243 aa6,83□□□□□ -1,32
Tpm1-216ENSMUST00000113707 Krtap5-5Q2TA51 241 aa6,83□□□□□ -1,32
Tpm1-216ENSMUST00000113707 Krtap5-4Q62220 223 aa6,83□□□□□ -1,32
Tpm1-216ENSMUST00000113707 Krtap31-2Q8CAY5 177 aa6,83□□□□□ -1,32
Tpm1-216ENSMUST00000113707 Gm11554B1AQB2 190 aa6,81□□□□□ -1,32
Tpm1-216ENSMUST00000113707 Macf1Q9QXZ0 7354 aaKnown RBP6,78□□□□□ -1,32
Tpm1-216ENSMUST00000113707 A0A1Y7VLE6 161 aa6,77□□□□□ -1,33
Tpm1-216ENSMUST00000113707 Krtap28-13A0A087WQP5 138 aa6,66□□□□□ -1,34
Tpm1-216ENSMUST00000113707 Hmcn1D3YXG0 5634 aa6,64□□□□□ -1,35
Tpm1-216ENSMUST00000113707 Krtap31-1Q9D644 177 aa6,59□□□□□ -1,35
Tpm1-216ENSMUST00000113707 Kmt2dQ6PDK2 5588 aa6,58□□□□□ -1,36
Tpm1-216ENSMUST00000113707 A030005L19RikA0A1Y7VIU2 113 aa6,54□□□□□ -1,36
Tpm1-216ENSMUST00000113707 Sprr2fO70557 76 aa6,52□□□□□ -1,37
Tpm1-216ENSMUST00000113707 A030005K14RikA0A1Y7VNY1 122 aa6,47□□□□□ -1,37
Tpm1-216ENSMUST00000113707 Gm10024A0A0A0MQA4 119 aa6,42□□□□□ -1,38
Tpm1-216ENSMUST00000113707 Gm39115A0A1B0GSH7 232 aa6,39□□□□□ -1,39
Tpm1-216ENSMUST00000113707 Eppk1Q8R0W0 6548 aa6,32□□□□□ -1,4
Tpm1-216ENSMUST00000113707 Krtap4-16Q91W93 202 aa6,02□□□□□ -1,45
Tpm1-216ENSMUST00000113707 Gm7544A0A1Y7VJ58 118 aa6□□□□□ -1,45
Tpm1-216ENSMUST00000113707 DstQ91ZU6 7393 aaKnown RBP5,94□□□□□ -1,46
Tpm1-216ENSMUST00000113707 Gm11639A0A1D5RLM8 5808 aa5,92□□□□□ -1,46
Tpm1-216ENSMUST00000113707 A0A1Y7VJ07 166 aa5,88□□□□□ -1,47
Tpm1-216ENSMUST00000113707 1110025L11RikO09048 78 aa5,82□□□□□ -1,48
Tpm1-216ENSMUST00000113707 Krtap6-5Q925H3 78 aa5,82□□□□□ -1,48
Tpm1-216ENSMUST00000113707 Muc19Q6PZE0 7524 aa5,81□□□□□ -1,48
Tpm1-216ENSMUST00000113707 Gpr98Q8VHN7 6298 aaKnown RBP5,64□□□□□ -1,51
Tpm1-216ENSMUST00000113707 AhnakE9Q616 5656 aaKnown RBP5,64□□□□□ -1,51
Tpm1-216ENSMUST00000113707 A030014E15RikA0A1Y7VJV2 120 aa5,63□□□□□ -1,51
Tpm1-216ENSMUST00000113707 Gm45618A0A1B0GSA0 219 aa5,61□□□□□ -1,51
Tpm1-216ENSMUST00000113707 Muc16A0A140LJ72 8478 aa5,56□□□□□ -1,52
Tpm1-216ENSMUST00000113707 A030003K21RikA0A1Y7VIM3 128 aa5,43□□□□□ -1,54
Tpm1-216ENSMUST00000113707 NebE9Q1W3 7152 aa5,3□□□□□ -1,56
Tpm1-216ENSMUST00000113707 Gm10229O08631 77 aa5,17□□□□□ -1,58
Tpm1-216ENSMUST00000113707 Sprr2bO70554 98 aa5,16□□□□□ -1,58
Tpm1-216ENSMUST00000113707 Gm6217A0A1Y7VJK9 128 aa5,15□□□□□ -1,59
Tpm1-216ENSMUST00000113707 Gm29735A0A1B0GT06 219 aa5,13□□□□□ -1,59
Tpm1-216ENSMUST00000113707 Gm11567Q9D141 195 aa5,04□□□□□ -1,6
Tpm1-216ENSMUST00000113707 A0A286YCP9 139 aa4,87□□□□□ -1,63
Tpm1-216ENSMUST00000113707 Krtap21-1Q925H4 128 aa4,76□□□□□ -1,65
Tpm1-216ENSMUST00000113707 Krtap6-2O08884 159 aa4,41□□□□□ -1,7
Tpm1-216ENSMUST00000113707 Phgr1Q8K0G7 91 aa4,37□□□□□ -1,71
Tpm1-216ENSMUST00000113707 Krtap5-1Q64507 230 aa3,27□□□□□ -1,89
Tpm1-216ENSMUST00000113707 Gm4559A4IF42 199 aa2,95□□□□□ -1,94
Retrieved 80 of 22,080 RNA–protein pairs in 8,4 ms