RNA–Protein interactions for RNA: ENSMUST00000111338.9

Ckap5-204, Transcript of Cytoskeleton-associated protein 5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap5, Length 6,665 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap5-204ENSMUST00000111338 Gm11563B1AQ90 168 aa1,63□□□□□ -2,15
Ckap5-204ENSMUST00000111338 Krtap4-7Q9D732 168 aa1,63□□□□□ -2,15
Ckap5-204ENSMUST00000111338 Krtap4-2B1AQ85 167 aa1,63□□□□□ -2,15
Ckap5-204ENSMUST00000111338 Sprr2hO70559 108 aa1,62□□□□□ -2,15
Ckap5-204ENSMUST00000111338 Krtap19-4Q925H7 84 aa1,62□□□□□ -2,15
Ckap5-204ENSMUST00000111338 Mt2P02798 61 aa1,61□□□□□ -2,15
Ckap5-204ENSMUST00000111338 Lce1kJ3QP15 125 aa1,61□□□□□ -2,15
Ckap5-204ENSMUST00000111338 Gm11555B1AQ89 175 aa1,61□□□□□ -2,15
Ckap5-204ENSMUST00000111338 Krtap19-2Q925I0 141 aa1,6□□□□□ -2,15
Ckap5-204ENSMUST00000111338 Mt4P47945 62 aa1,6□□□□□ -2,15
Ckap5-204ENSMUST00000111338 Lrp1Q91ZX7 4545 aaKnown RBP1,6□□□□□ -2,15
Ckap5-204ENSMUST00000111338 Lrp2A2ARV4 4660 aa1,59□□□□□ -2,15
Ckap5-204ENSMUST00000111338 Fat3Q8BNA6 4555 aa1,59□□□□□ -2,15
Ckap5-204ENSMUST00000111338 Gm11569B1AQB1 180 aa1,59□□□□□ -2,16
Ckap5-204ENSMUST00000111338 Gm7735D3YX18 52 aa1,58□□□□□ -2,16
Ckap5-204ENSMUST00000111338 SspoQ8CG65 4998 aa1,56□□□□□ -2,16
Ckap5-204ENSMUST00000111338 Lce1a1Q9CQH5 143 aa1,55□□□□□ -2,16
Ckap5-204ENSMUST00000111338 Lce1a2Q9D1K4 149 aa1,55□□□□□ -2,16
Ckap5-204ENSMUST00000111338 Krtap9-3Q3V2C1 136 aa1,54□□□□□ -2,16
Ckap5-204ENSMUST00000111338 Krtap4-6Q3V4B7 195 aa1,52□□□□□ -2,17
Ckap5-204ENSMUST00000111338 Gm10061D3Z714 54 aa1,51□□□□□ -2,17
Ckap5-204ENSMUST00000111338 Sprr2bO70554 98 aa1,51□□□□□ -2,17
Ckap5-204ENSMUST00000111338 Gm9789Q8BIG3 52 aa1,51□□□□□ -2,17
Ckap5-204ENSMUST00000111338 Krtap4-16Q91W93 202 aa1,47□□□□□ -2,17
Ckap5-204ENSMUST00000111338 Krtap19-1Q925H2 87 aa1,47□□□□□ -2,17
Ckap5-204ENSMUST00000111338 Krtap1-3A2A588 173 aa1,47□□□□□ -2,17
Ckap5-204ENSMUST00000111338 Gm11596B1AQB0 205 aa1,47□□□□□ -2,17
Ckap5-204ENSMUST00000111338 2300003K06RikA2A4M0 262 aa1,45□□□□□ -2,18
Ckap5-204ENSMUST00000111338 Gm11564A2A4L9 201 aa1,43□□□□□ -2,18
Ckap5-204ENSMUST00000111338 Gm11595B1AQA7 289 aa1,43□□□□□ -2,18
Ckap5-204ENSMUST00000111338 Krtap4-8B1AQA8 209 aa1,43□□□□□ -2,18
Ckap5-204ENSMUST00000111338 Mdn1A2ANY6 5589 aaKnown RBP1,41□□□□□ -2,18
Ckap5-204ENSMUST00000111338 Krtap4-9B1AQA9 244 aa1,4□□□□□ -2,18
Ckap5-204ENSMUST00000111338 Gm11562A0PK51 136 aa1,4□□□□□ -2,18
Ckap5-204ENSMUST00000111338 Mt3P28184 68 aa1,38□□□□□ -2,19
Ckap5-204ENSMUST00000111338 Krtap4-13Q9D7P3 165 aa1,38□□□□□ -2,19
Ckap5-204ENSMUST00000111338 Gm11938Q9D3H4 131 aa1,37□□□□□ -2,19
Ckap5-204ENSMUST00000111338 Krtap6-3A0A087WQL6 57 aa1,33□□□□□ -2,2
Ckap5-204ENSMUST00000111338 Gm11554B1AQB2 190 aa1,3□□□□□ -2,2
Ckap5-204ENSMUST00000111338 Kmt2dQ6PDK2 5588 aa1,24□□□□□ -2,21
Ckap5-204ENSMUST00000111338 Fsip2A2ARZ3 6995 aa1,21□□□□□ -2,22
Ckap5-204ENSMUST00000111338 Gm45337A0A1B0GS71 263 aa1,17□□□□□ -2,22
Ckap5-204ENSMUST00000111338 Gpr98Q8VHN7 6298 aaKnown RBP1,15□□□□□ -2,23
Ckap5-204ENSMUST00000111338 Syne2Q6ZWQ0 6874 aaKnown RBP1,14□□□□□ -2,23
Ckap5-204ENSMUST00000111338 Krtap5-2Q9D5Z7 189 aa1,14□□□□□ -2,23
Ckap5-204ENSMUST00000111338 Krtap20-2E9Q0A8 60 aa1,13□□□□□ -2,23
Ckap5-204ENSMUST00000111338 Gm40460A0A1B0GR10 244 aa1,13□□□□□ -2,23
Ckap5-204ENSMUST00000111338 Gm7579A0A1B0GRJ4 243 aa1,13□□□□□ -2,23
Ckap5-204ENSMUST00000111338 Krtap5-5Q2TA51 241 aa1,13□□□□□ -2,23
Ckap5-204ENSMUST00000111338 Krtap5-4Q62220 223 aa1,13□□□□□ -2,23
Ckap5-204ENSMUST00000111338 Gm11568A2A4M2 211 aa1,13□□□□□ -2,23
Ckap5-204ENSMUST00000111338 Krtap9-1Q64526 186 aa1,13□□□□□ -2,23
Ckap5-204ENSMUST00000111338 Gm11559Q9D3H7 191 aa1,13□□□□□ -2,23
Ckap5-204ENSMUST00000111338 Mt1P02802 61 aaKnown RBP1,12□□□□□ -2,23
Ckap5-204ENSMUST00000111338 Eppk1Q8R0W0 6548 aa1,11□□□□□ -2,23
Ckap5-204ENSMUST00000111338 Gm39115A0A1B0GSH7 232 aa1,1□□□□□ -2,23
Ckap5-204ENSMUST00000111338 Gm45618A0A1B0GSA0 219 aa1,09□□□□□ -2,23
Ckap5-204ENSMUST00000111338 Gm4553A0A1B0GSA9 284 aa1,09□□□□□ -2,23
Ckap5-204ENSMUST00000111338 Gm11639A0A1D5RLM8 5808 aa1,09□□□□□ -2,24
Ckap5-204ENSMUST00000111338 Gm10153A0A1B0GRL1 320 aa1,09□□□□□ -2,24
Ckap5-204ENSMUST00000111338 AhnakE9Q616 5656 aaKnown RBP1,04□□□□□ -2,24
Ckap5-204ENSMUST00000111338 Gm11567Q9D141 195 aa1,04□□□□□ -2,24
Ckap5-204ENSMUST00000111338 Muc19Q6PZE0 7524 aa1,03□□□□□ -2,24
Ckap5-204ENSMUST00000111338 Gm2431E9Q8S1 172 aa1,03□□□□□ -2,24
Ckap5-204ENSMUST00000111338 Hmcn1D3YXG0 5634 aa1□□□□□ -2,25
Ckap5-204ENSMUST00000111338 Syne1Q6ZWR6 8799 aa0,98□□□□□ -2,25
Ckap5-204ENSMUST00000111338 Phgr1Q8K0G7 91 aa0,95□□□□□ -2,26
Ckap5-204ENSMUST00000111338 Gm10229O08631 77 aa0,94□□□□□ -2,26
Ckap5-204ENSMUST00000111338 1110025L11RikO09048 78 aa0,94□□□□□ -2,26
Ckap5-204ENSMUST00000111338 Krtap6-5Q925H3 78 aa0,94□□□□□ -2,26
Ckap5-204ENSMUST00000111338 Macf1Q9QXZ0 7354 aaKnown RBP0,9□□□□□ -2,26
Ckap5-204ENSMUST00000111338 NebE9Q1W3 7152 aa0,88□□□□□ -2,27
Ckap5-204ENSMUST00000111338 ObscnA2AAJ9 8891 aaKnown RBP0,88□□□□□ -2,27
Ckap5-204ENSMUST00000111338 DstQ91ZU6 7393 aaKnown RBP0,85□□□□□ -2,27
Ckap5-204ENSMUST00000111338 Gm29735A0A1B0GT06 219 aa0,84□□□□□ -2,28
Ckap5-204ENSMUST00000111338 Muc16A0A140LJ72 8478 aa0,81□□□□□ -2,28
Ckap5-204ENSMUST00000111338 Krtap5-1Q64507 230 aa0,77□□□□□ -2,29
Ckap5-204ENSMUST00000111338 Krtap6-2O08884 159 aa0,73□□□□□ -2,29
Ckap5-204ENSMUST00000111338 Krtap21-1Q925H4 128 aa0,6□□□□□ -2,31
Ckap5-204ENSMUST00000111338 Gm4559A4IF42 199 aa0,58□□□□□ -2,32
Retrieved 80 of 22,080 RNA–protein pairs in 9,7 ms