RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Lce3bQ9CQM7 98 aa4.77□□□□□ -1.65
Trim11-203ENSMUST00000108810 4933428G20RikQ9D3X4 101 aa4.75□□□□□ -1.65
Trim11-203ENSMUST00000108810 Krtap19-4Q925H7 84 aa4.74□□□□□ -1.65
Trim11-203ENSMUST00000108810 Krtap4-13Q9D7P3 165 aa4.72□□□□□ -1.65
Trim11-203ENSMUST00000108810 2300003K06RikA2A4M0 262 aa4.69□□□□□ -1.66
Trim11-203ENSMUST00000108810 Lce1fB9EJP6 147 aa4.6□□□□□ -1.67
Trim11-203ENSMUST00000108810 Lce1a1Q9CQH5 143 aa4.6□□□□□ -1.67
Trim11-203ENSMUST00000108810 Sprr2kO70562 68 aa4.58□□□□□ -1.68
Trim11-203ENSMUST00000108810 Gm10100J3QK64 120 aa4.55□□□□□ -1.68
Trim11-203ENSMUST00000108810 Krtap4-7Q9D732 168 aa4.55□□□□□ -1.68
Trim11-203ENSMUST00000108810 Lce3cQ91V05 98 aa4.52□□□□□ -1.69
Trim11-203ENSMUST00000108810 A0A1Y7VJH8 109 aa4.5□□□□□ -1.69
Trim11-203ENSMUST00000108810 Lce1kJ3QP15 125 aa4.47□□□□□ -1.69
Trim11-203ENSMUST00000108810 Lce3eF8VQJ0 98 aa4.47□□□□□ -1.69
Trim11-203ENSMUST00000108810 Lce3fQ6PAI4 98 aa4.47□□□□□ -1.69
Trim11-203ENSMUST00000108810 Lce3dE9Q8V1 98 aa4.44□□□□□ -1.7
Trim11-203ENSMUST00000108810 Gm10142J3KMP7 120 aa4.44□□□□□ -1.7
Trim11-203ENSMUST00000108810 Sprr2iO70560 76 aa4.44□□□□□ -1.7
Trim11-203ENSMUST00000108810 Mt1P02802 61 aaKnown RBP4.43□□□□□ -1.7
Trim11-203ENSMUST00000108810 ObscnA2AAJ9 8891 aaKnown RBP4.42□□□□□ -1.7
Trim11-203ENSMUST00000108810 Lce1lQ9D1G7 135 aa4.39□□□□□ -1.71
Trim11-203ENSMUST00000108810 Krtap6-3A0A087WQL6 57 aa4.39□□□□□ -1.71
Trim11-203ENSMUST00000108810 Gm11568A2A4M2 211 aa4.38□□□□□ -1.71
Trim11-203ENSMUST00000108810 Krtap9-1Q64526 186 aa4.38□□□□□ -1.71
Trim11-203ENSMUST00000108810 Krtap5-2Q9D5Z7 189 aa4.37□□□□□ -1.71
Trim11-203ENSMUST00000108810 Sprr2hO70559 108 aa4.35□□□□□ -1.71
Trim11-203ENSMUST00000108810 Krtap20-2E9Q0A8 60 aa4.34□□□□□ -1.71
Trim11-203ENSMUST00000108810 Lce3aQ497I5 98 aa4.27□□□□□ -1.73
Trim11-203ENSMUST00000108810 Gm10153A0A1B0GRL1 320 aa4.16□□□□□ -1.74
Trim11-203ENSMUST00000108810 Sprr2eO70556 76 aa4.13□□□□□ -1.75
Trim11-203ENSMUST00000108810 Gm4553A0A1B0GSA9 284 aa4.03□□□□□ -1.77
Trim11-203ENSMUST00000108810 Gm45337A0A1B0GS71 263 aa3.99□□□□□ -1.77
Trim11-203ENSMUST00000108810 Gm11559Q9D3H7 191 aa3.98□□□□□ -1.77
Trim11-203ENSMUST00000108810 A0A1Y7VLE6 161 aa3.96□□□□□ -1.77
Trim11-203ENSMUST00000108810 Macf1Q9QXZ0 7354 aaKnown RBP3.94□□□□□ -1.78
Trim11-203ENSMUST00000108810 Mt3P28184 68 aa3.93□□□□□ -1.78
Trim11-203ENSMUST00000108810 Gm2431E9Q8S1 172 aa3.89□□□□□ -1.79
Trim11-203ENSMUST00000108810 Krtap31-1Q9D644 177 aa3.89□□□□□ -1.79
Trim11-203ENSMUST00000108810 Sprr2fO70557 76 aa3.88□□□□□ -1.79
Trim11-203ENSMUST00000108810 Gm40460A0A1B0GR10 244 aa3.88□□□□□ -1.79
Trim11-203ENSMUST00000108810 Gm7579A0A1B0GRJ4 243 aa3.88□□□□□ -1.79
Trim11-203ENSMUST00000108810 Krtap5-5Q2TA51 241 aa3.88□□□□□ -1.79
Trim11-203ENSMUST00000108810 Krtap5-4Q62220 223 aa3.88□□□□□ -1.79
Trim11-203ENSMUST00000108810 Hmcn1D3YXG0 5634 aa3.87□□□□□ -1.79
Trim11-203ENSMUST00000108810 Gm11554B1AQB2 190 aa3.81□□□□□ -1.8
Trim11-203ENSMUST00000108810 Kmt2dQ6PDK2 5588 aa3.72□□□□□ -1.81
Trim11-203ENSMUST00000108810 Gm10024A0A0A0MQA4 119 aa3.69□□□□□ -1.82
Trim11-203ENSMUST00000108810 Krtap4-16Q91W93 202 aa3.63□□□□□ -1.83
Trim11-203ENSMUST00000108810 A030005L19RikA0A1Y7VIU2 113 aa3.62□□□□□ -1.83
Trim11-203ENSMUST00000108810 Gm39115A0A1B0GSH7 232 aa3.61□□□□□ -1.83
Trim11-203ENSMUST00000108810 Eppk1Q8R0W0 6548 aa3.39□□□□□ -1.87
Trim11-203ENSMUST00000108810 Muc16A0A140LJ72 8478 aa3.37□□□□□ -1.87
Trim11-203ENSMUST00000108810 DstQ91ZU6 7393 aaKnown RBP3.36□□□□□ -1.87
Trim11-203ENSMUST00000108810 1110025L11RikO09048 78 aa3.35□□□□□ -1.87
Trim11-203ENSMUST00000108810 Krtap6-5Q925H3 78 aa3.35□□□□□ -1.87
Trim11-203ENSMUST00000108810 Gm11639A0A1D5RLM8 5808 aa3.34□□□□□ -1.87
Trim11-203ENSMUST00000108810 Muc19Q6PZE0 7524 aa3.34□□□□□ -1.88
Trim11-203ENSMUST00000108810 Krtap31-2Q8CAY5 177 aa3.24□□□□□ -1.89
Trim11-203ENSMUST00000108810 AhnakE9Q616 5656 aaKnown RBP3.23□□□□□ -1.89
Trim11-203ENSMUST00000108810 A0A1Y7VJ07 166 aa3.22□□□□□ -1.89
Trim11-203ENSMUST00000108810 Gm45618A0A1B0GSA0 219 aa3.13□□□□□ -1.91
Trim11-203ENSMUST00000108810 NebE9Q1W3 7152 aa3.01□□□□□ -1.93
Trim11-203ENSMUST00000108810 Gm10229O08631 77 aa2.96□□□□□ -1.94
Trim11-203ENSMUST00000108810 Gpr98Q8VHN7 6298 aaKnown RBP2.95□□□□□ -1.94
Trim11-203ENSMUST00000108810 Sprr2bO70554 98 aa2.95□□□□□ -1.94
Trim11-203ENSMUST00000108810 Gm29735A0A1B0GT06 219 aa2.92□□□□□ -1.94
Trim11-203ENSMUST00000108810 Gm11567Q9D141 195 aa2.91□□□□□ -1.94
Trim11-203ENSMUST00000108810 Krtap21-1Q925H4 128 aa2.76□□□□□ -1.97
Trim11-203ENSMUST00000108810 A0A286YCP9 139 aa2.67□□□□□ -1.98
Trim11-203ENSMUST00000108810 Phgr1Q8K0G7 91 aa2.57□□□□□ -2
Trim11-203ENSMUST00000108810 Krtap6-2O08884 159 aa2.52□□□□□ -2.01
Trim11-203ENSMUST00000108810 A030003K21RikA0A1Y7VIM3 128 aa1.92□□□□□ -2.1
Trim11-203ENSMUST00000108810 Krtap5-1Q64507 230 aa1.82□□□□□ -2.12
Trim11-203ENSMUST00000108810 Gm4559A4IF42 199 aa1.68□□□□□ -2.14
Trim11-203ENSMUST00000108810 Krtap28-10A0A1Y7VP58 119 aa1.5□□□□□ -2.17
Trim11-203ENSMUST00000108810 Krtap28-13A0A087WQP5 138 aa1.44□□□□□ -2.18
Trim11-203ENSMUST00000108810 Gm6217A0A1Y7VJK9 128 aa1.4□□□□□ -2.19
Trim11-203ENSMUST00000108810 A030014E15RikA0A1Y7VJV2 120 aa1.28□□□□□ -2.2
Trim11-203ENSMUST00000108810 A030005K14RikA0A1Y7VNY1 122 aa1.26□□□□□ -2.21
Trim11-203ENSMUST00000108810 Gm7544A0A1Y7VJ58 118 aa1.13□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 9.3 ms