RNA–Protein interactions for RNA: ENSMUST00000106789.7

Trim3-202, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 2,841 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-202ENSMUST00000106789 Krtap4-2B1AQ85 167 aa6.46□□□□□ -1.38
Trim3-202ENSMUST00000106789 Lce3aQ497I5 98 aa6.46□□□□□ -1.38
Trim3-202ENSMUST00000106789 ObscnA2AAJ9 8891 aaKnown RBP6.44□□□□□ -1.38
Trim3-202ENSMUST00000106789 Syne2Q6ZWQ0 6874 aaKnown RBP6.44□□□□□ -1.38
Trim3-202ENSMUST00000106789 Lce1gQ9D195 139 aa6.4□□□□□ -1.38
Trim3-202ENSMUST00000106789 2300003K06RikA2A4M0 262 aa6.4□□□□□ -1.39
Trim3-202ENSMUST00000106789 Sprr2fO70557 76 aa6.4□□□□□ -1.39
Trim3-202ENSMUST00000106789 Krtap4-1Q3UUY3 169 aa6.39□□□□□ -1.39
Trim3-202ENSMUST00000106789 Krtap31-1Q9D644 177 aa6.36□□□□□ -1.39
Trim3-202ENSMUST00000106789 Gm38119A0A0A6YX29 146 aa6.35□□□□□ -1.39
Trim3-202ENSMUST00000106789 Sprr2kO70562 68 aa6.3□□□□□ -1.4
Trim3-202ENSMUST00000106789 Gm11555B1AQ89 175 aa6.28□□□□□ -1.4
Trim3-202ENSMUST00000106789 Gm11596B1AQB0 205 aa6.27□□□□□ -1.41
Trim3-202ENSMUST00000106789 Mt4P47945 62 aa6.24□□□□□ -1.41
Trim3-202ENSMUST00000106789 Gm11564A2A4L9 201 aa6.16□□□□□ -1.42
Trim3-202ENSMUST00000106789 Gm11563B1AQ90 168 aa6.16□□□□□ -1.42
Trim3-202ENSMUST00000106789 Gm11595B1AQA7 289 aa6.16□□□□□ -1.42
Trim3-202ENSMUST00000106789 Krtap4-8B1AQA8 209 aa6.16□□□□□ -1.42
Trim3-202ENSMUST00000106789 Krtap4-16Q91W93 202 aa6.12□□□□□ -1.43
Trim3-202ENSMUST00000106789 Krtap4-9B1AQA9 244 aa6.07□□□□□ -1.44
Trim3-202ENSMUST00000106789 Lce1bQ9D149 137 aa6.04□□□□□ -1.44
Trim3-202ENSMUST00000106789 Mt1P02802 61 aaKnown RBP6.03□□□□□ -1.44
Trim3-202ENSMUST00000106789 Lce1lQ9D1G7 135 aa6.03□□□□□ -1.44
Trim3-202ENSMUST00000106789 Lce1kJ3QP15 125 aa5.96□□□□□ -1.46
Trim3-202ENSMUST00000106789 Krtap4-13Q9D7P3 165 aa5.9□□□□□ -1.46
Trim3-202ENSMUST00000106789 Krtap4-7Q9D732 168 aa5.66□□□□□ -1.5
Trim3-202ENSMUST00000106789 Gm11568A2A4M2 211 aa5.64□□□□□ -1.51
Trim3-202ENSMUST00000106789 Krtap9-1Q64526 186 aa5.64□□□□□ -1.51
Trim3-202ENSMUST00000106789 Gm10024A0A0A0MQA4 119 aa5.63□□□□□ -1.51
Trim3-202ENSMUST00000106789 Muc16A0A140LJ72 8478 aa5.59□□□□□ -1.51
Trim3-202ENSMUST00000106789 Krtap20-2E9Q0A8 60 aa5.5□□□□□ -1.53
Trim3-202ENSMUST00000106789 A0A1Y7VJH8 109 aa5.47□□□□□ -1.53
Trim3-202ENSMUST00000106789 Macf1Q9QXZ0 7354 aaKnown RBP5.46□□□□□ -1.53
Trim3-202ENSMUST00000106789 Krtap5-2Q9D5Z7 189 aa5.3□□□□□ -1.56
Trim3-202ENSMUST00000106789 A0A1Y7VLE6 161 aa5.26□□□□□ -1.57
Trim3-202ENSMUST00000106789 Mt3P28184 68 aa5.26□□□□□ -1.57
Trim3-202ENSMUST00000106789 Gm10153A0A1B0GRL1 320 aa5.26□□□□□ -1.57
Trim3-202ENSMUST00000106789 Krtap6-3A0A087WQL6 57 aa5.19□□□□□ -1.58
Trim3-202ENSMUST00000106789 Kmt2dQ6PDK2 5588 aa5.09□□□□□ -1.59
Trim3-202ENSMUST00000106789 Hmcn1D3YXG0 5634 aa5.08□□□□□ -1.6
Trim3-202ENSMUST00000106789 Gm11554B1AQB2 190 aa4.86□□□□□ -1.63
Trim3-202ENSMUST00000106789 Gm45337A0A1B0GS71 263 aa4.79□□□□□ -1.64
Trim3-202ENSMUST00000106789 Muc19Q6PZE0 7524 aa4.77□□□□□ -1.65
Trim3-202ENSMUST00000106789 Gm4553A0A1B0GSA9 284 aa4.77□□□□□ -1.65
Trim3-202ENSMUST00000106789 Gm11559Q9D3H7 191 aa4.72□□□□□ -1.65
Trim3-202ENSMUST00000106789 1110025L11RikO09048 78 aa4.68□□□□□ -1.66
Trim3-202ENSMUST00000106789 Krtap6-5Q925H3 78 aa4.68□□□□□ -1.66
Trim3-202ENSMUST00000106789 Gm2431E9Q8S1 172 aa4.68□□□□□ -1.66
Trim3-202ENSMUST00000106789 Gm40460A0A1B0GR10 244 aa4.64□□□□□ -1.67
Trim3-202ENSMUST00000106789 Gm7579A0A1B0GRJ4 243 aa4.64□□□□□ -1.67
Trim3-202ENSMUST00000106789 Krtap5-5Q2TA51 241 aa4.64□□□□□ -1.67
Trim3-202ENSMUST00000106789 Krtap5-4Q62220 223 aa4.64□□□□□ -1.67
Trim3-202ENSMUST00000106789 DstQ91ZU6 7393 aaKnown RBP4.49□□□□□ -1.69
Trim3-202ENSMUST00000106789 Krtap31-2Q8CAY5 177 aa4.43□□□□□ -1.7
Trim3-202ENSMUST00000106789 NebE9Q1W3 7152 aa4.33□□□□□ -1.72
Trim3-202ENSMUST00000106789 Sprr2bO70554 98 aa4.32□□□□□ -1.72
Trim3-202ENSMUST00000106789 Eppk1Q8R0W0 6548 aa4.3□□□□□ -1.72
Trim3-202ENSMUST00000106789 Gm11639A0A1D5RLM8 5808 aa4.28□□□□□ -1.72
Trim3-202ENSMUST00000106789 Gm39115A0A1B0GSH7 232 aa4.15□□□□□ -1.74
Trim3-202ENSMUST00000106789 Gm10229O08631 77 aa4.13□□□□□ -1.75
Trim3-202ENSMUST00000106789 AhnakE9Q616 5656 aaKnown RBP4.09□□□□□ -1.75
Trim3-202ENSMUST00000106789 A030005L19RikA0A1Y7VIU2 113 aa4.08□□□□□ -1.76
Trim3-202ENSMUST00000106789 A0A1Y7VJ07 166 aa4.08□□□□□ -1.76
Trim3-202ENSMUST00000106789 Phgr1Q8K0G7 91 aa3.91□□□□□ -1.78
Trim3-202ENSMUST00000106789 Krtap21-1Q925H4 128 aa3.85□□□□□ -1.79
Trim3-202ENSMUST00000106789 Gm11567Q9D141 195 aa3.85□□□□□ -1.79
Trim3-202ENSMUST00000106789 A0A286YCP9 139 aa3.83□□□□□ -1.8
Trim3-202ENSMUST00000106789 Gpr98Q8VHN7 6298 aaKnown RBP3.8□□□□□ -1.8
Trim3-202ENSMUST00000106789 Gm29735A0A1B0GT06 219 aa3.54□□□□□ -1.84
Trim3-202ENSMUST00000106789 Gm45618A0A1B0GSA0 219 aa3.44□□□□□ -1.86
Trim3-202ENSMUST00000106789 Krtap6-2O08884 159 aa3.43□□□□□ -1.86
Trim3-202ENSMUST00000106789 A030003K21RikA0A1Y7VIM3 128 aa2.57□□□□□ -2
Trim3-202ENSMUST00000106789 Krtap5-1Q64507 230 aa2.22□□□□□ -2.05
Trim3-202ENSMUST00000106789 Krtap28-13A0A087WQP5 138 aa2.18□□□□□ -2.06
Trim3-202ENSMUST00000106789 Gm4559A4IF42 199 aa2.04□□□□□ -2.08
Trim3-202ENSMUST00000106789 Gm6217A0A1Y7VJK9 128 aa1.91□□□□□ -2.1
Trim3-202ENSMUST00000106789 Krtap28-10A0A1Y7VP58 119 aa1.75□□□□□ -2.13
Trim3-202ENSMUST00000106789 Gm7544A0A1Y7VJ58 118 aa1.49□□□□□ -2.17
Trim3-202ENSMUST00000106789 A030014E15RikA0A1Y7VJV2 120 aa1.44□□□□□ -2.18
Trim3-202ENSMUST00000106789 A030005K14RikA0A1Y7VNY1 122 aa1.44□□□□□ -2.18
Retrieved 80 of 22,080 RNA–protein pairs in 12.9 ms