RNA–Protein interactions for RNA: ENSMUST00000106619.7

Ttc39a-203, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

TSL 1 (best) BASIC

Gene Ttc39a, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-203ENSMUST00000106619 Lce1dQ9D731 133 aa6.39□□□□□ -1.39
Ttc39a-203ENSMUST00000106619 A0A1Y7VLE6 161 aa6.39□□□□□ -1.39
Ttc39a-203ENSMUST00000106619 Krtap28-10A0A1Y7VP58 119 aa6.38□□□□□ -1.39
Ttc39a-203ENSMUST00000106619 Krtap28-13A0A087WQP5 138 aa6.35□□□□□ -1.39
Ttc39a-203ENSMUST00000106619 Sprr2gO70558 76 aa6.23□□□□□ -1.41
Ttc39a-203ENSMUST00000106619 A030005K14RikA0A1Y7VNY1 122 aa6.23□□□□□ -1.41
Ttc39a-203ENSMUST00000106619 Sprr2iO70560 76 aa6.2□□□□□ -1.42
Ttc39a-203ENSMUST00000106619 Lce1kJ3QP15 125 aa6.18□□□□□ -1.42
Ttc39a-203ENSMUST00000106619 Gm20538F6Z9R1 75 aa6.17□□□□□ -1.42
Ttc39a-203ENSMUST00000106619 Krtap20-2E9Q0A8 60 aa6.14□□□□□ -1.43
Ttc39a-203ENSMUST00000106619 Sprr2dO70555 85 aa6.14□□□□□ -1.43
Ttc39a-203ENSMUST00000106619 Krtap5-2Q9D5Z7 189 aa6.13□□□□□ -1.43
Ttc39a-203ENSMUST00000106619 Lce1a1Q9CQH5 143 aa6.04□□□□□ -1.44
Ttc39a-203ENSMUST00000106619 Gm11568A2A4M2 211 aa6.01□□□□□ -1.45
Ttc39a-203ENSMUST00000106619 Krtap9-1Q64526 186 aa6.01□□□□□ -1.45
Ttc39a-203ENSMUST00000106619 Krtap19-4Q925H7 84 aa5.99□□□□□ -1.45
Ttc39a-203ENSMUST00000106619 Ndufaf8A2AMZ4 74 aa5.98□□□□□ -1.45
Ttc39a-203ENSMUST00000106619 Lce1fB9EJP6 147 aa5.98□□□□□ -1.45
Ttc39a-203ENSMUST00000106619 Lce1cQ9D1C5 147 aa5.98□□□□□ -1.45
Ttc39a-203ENSMUST00000106619 Lce1eQ9D139 143 aa5.98□□□□□ -1.45
Ttc39a-203ENSMUST00000106619 Lce3cQ91V05 98 aa5.94□□□□□ -1.46
Ttc39a-203ENSMUST00000106619 Mt1P02802 61 aaKnown RBP5.93□□□□□ -1.46
Ttc39a-203ENSMUST00000106619 Lce3dE9Q8V1 98 aa5.85□□□□□ -1.47
Ttc39a-203ENSMUST00000106619 Lce3eF8VQJ0 98 aa5.8□□□□□ -1.48
Ttc39a-203ENSMUST00000106619 Lce3fQ6PAI4 98 aa5.8□□□□□ -1.48
Ttc39a-203ENSMUST00000106619 Gm11559Q9D3H7 191 aa5.76□□□□□ -1.49
Ttc39a-203ENSMUST00000106619 A030005L19RikA0A1Y7VIU2 113 aa5.75□□□□□ -1.49
Ttc39a-203ENSMUST00000106619 4933428G20RikQ9D3X4 101 aa5.75□□□□□ -1.49
Ttc39a-203ENSMUST00000106619 Gm4553A0A1B0GSA9 284 aa5.73□□□□□ -1.49
Ttc39a-203ENSMUST00000106619 ObscnA2AAJ9 8891 aaKnown RBP5.72□□□□□ -1.49
Ttc39a-203ENSMUST00000106619 A0A1Y7VJ07 166 aa5.7□□□□□ -1.5
Ttc39a-203ENSMUST00000106619 Gm10153A0A1B0GRL1 320 aa5.68□□□□□ -1.5
Ttc39a-203ENSMUST00000106619 Gm7544A0A1Y7VJ58 118 aa5.64□□□□□ -1.51
Ttc39a-203ENSMUST00000106619 A030014E15RikA0A1Y7VJV2 120 aa5.63□□□□□ -1.51
Ttc39a-203ENSMUST00000106619 Gm10100J3QK64 120 aa5.62□□□□□ -1.51
Ttc39a-203ENSMUST00000106619 Gm45337A0A1B0GS71 263 aa5.61□□□□□ -1.51
Ttc39a-203ENSMUST00000106619 Macf1Q9QXZ0 7354 aaKnown RBP5.59□□□□□ -1.51
Ttc39a-203ENSMUST00000106619 Lce3aQ497I5 98 aa5.55□□□□□ -1.52
Ttc39a-203ENSMUST00000106619 Gm11554B1AQB2 190 aa5.53□□□□□ -1.52
Ttc39a-203ENSMUST00000106619 Gm2431E9Q8S1 172 aa5.53□□□□□ -1.52
Ttc39a-203ENSMUST00000106619 Gm10142J3KMP7 120 aa5.45□□□□□ -1.54
Ttc39a-203ENSMUST00000106619 Gm40460A0A1B0GR10 244 aa5.44□□□□□ -1.54
Ttc39a-203ENSMUST00000106619 Gm7579A0A1B0GRJ4 243 aa5.44□□□□□ -1.54
Ttc39a-203ENSMUST00000106619 Krtap5-5Q2TA51 241 aa5.44□□□□□ -1.54
Ttc39a-203ENSMUST00000106619 Krtap5-4Q62220 223 aa5.44□□□□□ -1.54
Ttc39a-203ENSMUST00000106619 Kmt2dQ6PDK2 5588 aa5.43□□□□□ -1.54
Ttc39a-203ENSMUST00000106619 Hmcn1D3YXG0 5634 aa5.37□□□□□ -1.55
Ttc39a-203ENSMUST00000106619 Mt3P28184 68 aa5.37□□□□□ -1.55
Ttc39a-203ENSMUST00000106619 Sprr2hO70559 108 aa5.32□□□□□ -1.56
Ttc39a-203ENSMUST00000106619 Eppk1Q8R0W0 6548 aa5.25□□□□□ -1.57
Ttc39a-203ENSMUST00000106619 Gm39115A0A1B0GSH7 232 aa5.18□□□□□ -1.58
Ttc39a-203ENSMUST00000106619 Gm9112A2AI92 75 aa4.96□□□□□ -1.62
Ttc39a-203ENSMUST00000106619 Muc19Q6PZE0 7524 aa4.94□□□□□ -1.62
Ttc39a-203ENSMUST00000106619 DstQ91ZU6 7393 aaKnown RBP4.94□□□□□ -1.62
Ttc39a-203ENSMUST00000106619 Sprr2eO70556 76 aa4.93□□□□□ -1.62
Ttc39a-203ENSMUST00000106619 Gm11639A0A1D5RLM8 5808 aa4.93□□□□□ -1.62
Ttc39a-203ENSMUST00000106619 Gm10024A0A0A0MQA4 119 aa4.7□□□□□ -1.66
Ttc39a-203ENSMUST00000106619 A030003K21RikA0A1Y7VIM3 128 aa4.7□□□□□ -1.66
Ttc39a-203ENSMUST00000106619 Sprr2fO70557 76 aa4.69□□□□□ -1.66
Ttc39a-203ENSMUST00000106619 AhnakE9Q616 5656 aaKnown RBP4.65□□□□□ -1.66
Ttc39a-203ENSMUST00000106619 Gm45618A0A1B0GSA0 219 aa4.65□□□□□ -1.67
Ttc39a-203ENSMUST00000106619 Krtap31-1Q9D644 177 aa4.57□□□□□ -1.68
Ttc39a-203ENSMUST00000106619 Gpr98Q8VHN7 6298 aaKnown RBP4.55□□□□□ -1.68
Ttc39a-203ENSMUST00000106619 Krtap4-16Q91W93 202 aa4.55□□□□□ -1.68
Ttc39a-203ENSMUST00000106619 NebE9Q1W3 7152 aa4.54□□□□□ -1.68
Ttc39a-203ENSMUST00000106619 Gm6217A0A1Y7VJK9 128 aa4.49□□□□□ -1.69
Ttc39a-203ENSMUST00000106619 A0A286YCP9 139 aa4.45□□□□□ -1.7
Ttc39a-203ENSMUST00000106619 1110025L11RikO09048 78 aa4.4□□□□□ -1.7
Ttc39a-203ENSMUST00000106619 Krtap6-5Q925H3 78 aa4.4□□□□□ -1.7
Ttc39a-203ENSMUST00000106619 Krtap31-2Q8CAY5 177 aa4.37□□□□□ -1.71
Ttc39a-203ENSMUST00000106619 Muc16A0A140LJ72 8478 aa4.22□□□□□ -1.73
Ttc39a-203ENSMUST00000106619 Gm29735A0A1B0GT06 219 aa4.07□□□□□ -1.76
Ttc39a-203ENSMUST00000106619 Gm11567Q9D141 195 aa3.92□□□□□ -1.78
Ttc39a-203ENSMUST00000106619 Gm10229O08631 77 aa3.91□□□□□ -1.78
Ttc39a-203ENSMUST00000106619 Sprr2bO70554 98 aa3.74□□□□□ -1.81
Ttc39a-203ENSMUST00000106619 Krtap21-1Q925H4 128 aa3.58□□□□□ -1.84
Ttc39a-203ENSMUST00000106619 Krtap6-2O08884 159 aa3.39□□□□□ -1.87
Ttc39a-203ENSMUST00000106619 Phgr1Q8K0G7 91 aa3.17□□□□□ -1.9
Ttc39a-203ENSMUST00000106619 Krtap5-1Q64507 230 aa2.74□□□□□ -1.97
Ttc39a-203ENSMUST00000106619 Gm4559A4IF42 199 aa2.33□□□□□ -2.04
Retrieved 80 of 22,080 RNA–protein pairs in 5.9 ms