RNA–Protein interactions for RNA: ENSMUST00000106118.9

Ebf3-202, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 3,736 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-202ENSMUST00000106118 Sprr2kO70562 68 aa3.7□□□□□ -1.82
Ebf3-202ENSMUST00000106118 Lce1dQ9D731 133 aa3.7□□□□□ -1.82
Ebf3-202ENSMUST00000106118 Syne2Q6ZWQ0 6874 aaKnown RBP3.7□□□□□ -1.82
Ebf3-202ENSMUST00000106118 Mt4P47945 62 aa3.68□□□□□ -1.82
Ebf3-202ENSMUST00000106118 Lce3cQ91V05 98 aa3.65□□□□□ -1.82
Ebf3-202ENSMUST00000106118 Krtap4-9B1AQA9 244 aa3.65□□□□□ -1.83
Ebf3-202ENSMUST00000106118 Gm38119A0A0A6YX29 146 aa3.64□□□□□ -1.83
Ebf3-202ENSMUST00000106118 Lce1bQ9D149 137 aa3.64□□□□□ -1.83
Ebf3-202ENSMUST00000106118 Krtap19-4Q925H7 84 aa3.59□□□□□ -1.83
Ebf3-202ENSMUST00000106118 Lce3dE9Q8V1 98 aa3.59□□□□□ -1.83
Ebf3-202ENSMUST00000106118 Macf1Q9QXZ0 7354 aaKnown RBP3.54□□□□□ -1.84
Ebf3-202ENSMUST00000106118 Lce1eQ9D139 143 aa3.54□□□□□ -1.84
Ebf3-202ENSMUST00000106118 Lce3eF8VQJ0 98 aa3.53□□□□□ -1.84
Ebf3-202ENSMUST00000106118 Lce3fQ6PAI4 98 aa3.53□□□□□ -1.84
Ebf3-202ENSMUST00000106118 A0A1Y7VJH8 109 aa3.52□□□□□ -1.85
Ebf3-202ENSMUST00000106118 ObscnA2AAJ9 8891 aaKnown RBP3.51□□□□□ -1.85
Ebf3-202ENSMUST00000106118 2300003K06RikA2A4M0 262 aa3.5□□□□□ -1.85
Ebf3-202ENSMUST00000106118 Krtap4-13Q9D7P3 165 aa3.5□□□□□ -1.85
Ebf3-202ENSMUST00000106118 Lce1cQ9D1C5 147 aa3.45□□□□□ -1.86
Ebf3-202ENSMUST00000106118 Lce3aQ497I5 98 aa3.45□□□□□ -1.86
Ebf3-202ENSMUST00000106118 Sprr2iO70560 76 aa3.43□□□□□ -1.86
Ebf3-202ENSMUST00000106118 Krtap28-10A0A1Y7VP58 119 aa3.41□□□□□ -1.86
Ebf3-202ENSMUST00000106118 Krtap4-16Q91W93 202 aa3.36□□□□□ -1.87
Ebf3-202ENSMUST00000106118 Lce1fB9EJP6 147 aa3.36□□□□□ -1.87
Ebf3-202ENSMUST00000106118 Lce1lQ9D1G7 135 aa3.36□□□□□ -1.87
Ebf3-202ENSMUST00000106118 Lce1kJ3QP15 125 aa3.34□□□□□ -1.87
Ebf3-202ENSMUST00000106118 Krtap6-3A0A087WQL6 57 aa3.33□□□□□ -1.88
Ebf3-202ENSMUST00000106118 Lce1a1Q9CQH5 143 aa3.32□□□□□ -1.88
Ebf3-202ENSMUST00000106118 A0A1Y7VLE6 161 aa3.29□□□□□ -1.88
Ebf3-202ENSMUST00000106118 Mt1P02802 61 aaKnown RBP3.29□□□□□ -1.88
Ebf3-202ENSMUST00000106118 Krtap28-13A0A087WQP5 138 aa3.27□□□□□ -1.89
Ebf3-202ENSMUST00000106118 Gm7544A0A1Y7VJ58 118 aa3.22□□□□□ -1.89
Ebf3-202ENSMUST00000106118 Sprr2hO70559 108 aa3.22□□□□□ -1.89
Ebf3-202ENSMUST00000106118 Krtap20-2E9Q0A8 60 aa3.21□□□□□ -1.9
Ebf3-202ENSMUST00000106118 A030005L19RikA0A1Y7VIU2 113 aa3.19□□□□□ -1.9
Ebf3-202ENSMUST00000106118 Krtap5-2Q9D5Z7 189 aa3.18□□□□□ -1.9
Ebf3-202ENSMUST00000106118 Gm11568A2A4M2 211 aa3.17□□□□□ -1.9
Ebf3-202ENSMUST00000106118 Krtap9-1Q64526 186 aa3.17□□□□□ -1.9
Ebf3-202ENSMUST00000106118 Sprr2fO70557 76 aa3.16□□□□□ -1.9
Ebf3-202ENSMUST00000106118 Muc19Q6PZE0 7524 aa3.14□□□□□ -1.91
Ebf3-202ENSMUST00000106118 Gm10024A0A0A0MQA4 119 aa3.14□□□□□ -1.91
Ebf3-202ENSMUST00000106118 A030005K14RikA0A1Y7VNY1 122 aa3.13□□□□□ -1.91
Ebf3-202ENSMUST00000106118 Sprr2eO70556 76 aa3.09□□□□□ -1.91
Ebf3-202ENSMUST00000106118 DstQ91ZU6 7393 aaKnown RBP3.08□□□□□ -1.92
Ebf3-202ENSMUST00000106118 Mt3P28184 68 aa3.01□□□□□ -1.93
Ebf3-202ENSMUST00000106118 Gm10153A0A1B0GRL1 320 aa2.98□□□□□ -1.93
Ebf3-202ENSMUST00000106118 A0A1Y7VJ07 166 aa2.97□□□□□ -1.93
Ebf3-202ENSMUST00000106118 Gm4553A0A1B0GSA9 284 aa2.95□□□□□ -1.94
Ebf3-202ENSMUST00000106118 Gm11559Q9D3H7 191 aa2.95□□□□□ -1.94
Ebf3-202ENSMUST00000106118 NebE9Q1W3 7152 aa2.92□□□□□ -1.94
Ebf3-202ENSMUST00000106118 A030014E15RikA0A1Y7VJV2 120 aa2.9□□□□□ -1.94
Ebf3-202ENSMUST00000106118 Gm45337A0A1B0GS71 263 aa2.9□□□□□ -1.95
Ebf3-202ENSMUST00000106118 A030003K21RikA0A1Y7VIM3 128 aa2.89□□□□□ -1.95
Ebf3-202ENSMUST00000106118 Gm11554B1AQB2 190 aa2.85□□□□□ -1.95
Ebf3-202ENSMUST00000106118 Gm40460A0A1B0GR10 244 aa2.83□□□□□ -1.96
Ebf3-202ENSMUST00000106118 Gm7579A0A1B0GRJ4 243 aa2.83□□□□□ -1.96
Ebf3-202ENSMUST00000106118 Krtap5-5Q2TA51 241 aa2.83□□□□□ -1.96
Ebf3-202ENSMUST00000106118 Krtap5-4Q62220 223 aa2.83□□□□□ -1.96
Ebf3-202ENSMUST00000106118 Gm6217A0A1Y7VJK9 128 aa2.82□□□□□ -1.96
Ebf3-202ENSMUST00000106118 Gm2431E9Q8S1 172 aa2.82□□□□□ -1.96
Ebf3-202ENSMUST00000106118 A0A286YCP9 139 aa2.77□□□□□ -1.97
Ebf3-202ENSMUST00000106118 Kmt2dQ6PDK2 5588 aa2.75□□□□□ -1.97
Ebf3-202ENSMUST00000106118 Hmcn1D3YXG0 5634 aa2.75□□□□□ -1.97
Ebf3-202ENSMUST00000106118 Gm39115A0A1B0GSH7 232 aa2.63□□□□□ -1.99
Ebf3-202ENSMUST00000106118 Eppk1Q8R0W0 6548 aa2.54□□□□□ -2
Ebf3-202ENSMUST00000106118 1110025L11RikO09048 78 aa2.51□□□□□ -2.01
Ebf3-202ENSMUST00000106118 Krtap6-5Q925H3 78 aa2.51□□□□□ -2.01
Ebf3-202ENSMUST00000106118 Gpr98Q8VHN7 6298 aaKnown RBP2.51□□□□□ -2.01
Ebf3-202ENSMUST00000106118 Gm11639A0A1D5RLM8 5808 aa2.47□□□□□ -2.01
Ebf3-202ENSMUST00000106118 AhnakE9Q616 5656 aaKnown RBP2.36□□□□□ -2.03
Ebf3-202ENSMUST00000106118 Sprr2bO70554 98 aa2.33□□□□□ -2.04
Ebf3-202ENSMUST00000106118 Gm45618A0A1B0GSA0 219 aa2.3□□□□□ -2.04
Ebf3-202ENSMUST00000106118 Gm10229O08631 77 aa2.24□□□□□ -2.05
Ebf3-202ENSMUST00000106118 Gm29735A0A1B0GT06 219 aa2.14□□□□□ -2.07
Ebf3-202ENSMUST00000106118 Gm11567Q9D141 195 aa2.09□□□□□ -2.08
Ebf3-202ENSMUST00000106118 Phgr1Q8K0G7 91 aa2.07□□□□□ -2.08
Ebf3-202ENSMUST00000106118 Krtap21-1Q925H4 128 aa2.04□□□□□ -2.08
Ebf3-202ENSMUST00000106118 Krtap6-2O08884 159 aa1.9□□□□□ -2.11
Ebf3-202ENSMUST00000106118 Krtap5-1Q64507 230 aa1.33□□□□□ -2.2
Ebf3-202ENSMUST00000106118 Gm4559A4IF42 199 aa1.32□□□□□ -2.2
Retrieved 80 of 22,080 RNA–protein pairs in 62.4 ms