RNA–Protein interactions for RNA: ENSMUST00000103059.1

Col9a3-201, Transcript of Collagen, type IX, alpha 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col9a3, Length 2,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3-201ENSMUST00000103059 Fsip2A2ARZ3 6995 aa4.25□□□□□ -1.73
Col9a3-201ENSMUST00000103059 Krtap31-1Q9D644 177 aa4.24□□□□□ -1.73
Col9a3-201ENSMUST00000103059 Lce1fB9EJP6 147 aa4.21□□□□□ -1.74
Col9a3-201ENSMUST00000103059 Lce1a1Q9CQH5 143 aa4.21□□□□□ -1.74
Col9a3-201ENSMUST00000103059 Lce1gQ9D195 139 aa4.21□□□□□ -1.74
Col9a3-201ENSMUST00000103059 Gm10142J3KMP7 120 aa4.2□□□□□ -1.74
Col9a3-201ENSMUST00000103059 Lce3bQ9CQM7 98 aa4.2□□□□□ -1.74
Col9a3-201ENSMUST00000103059 Krtap19-4Q925H7 84 aa4.16□□□□□ -1.74
Col9a3-201ENSMUST00000103059 Gm38119A0A0A6YX29 146 aa4.15□□□□□ -1.75
Col9a3-201ENSMUST00000103059 Mt4P47945 62 aa4.15□□□□□ -1.75
Col9a3-201ENSMUST00000103059 A0A1Y7VJ07 166 aa4.14□□□□□ -1.75
Col9a3-201ENSMUST00000103059 Syne2Q6ZWQ0 6874 aaKnown RBP4.13□□□□□ -1.75
Col9a3-201ENSMUST00000103059 Gm11596B1AQB0 205 aa4.13□□□□□ -1.75
Col9a3-201ENSMUST00000103059 Gm11564A2A4L9 201 aa4.11□□□□□ -1.75
Col9a3-201ENSMUST00000103059 Gm11595B1AQA7 289 aa4.11□□□□□ -1.75
Col9a3-201ENSMUST00000103059 Krtap4-8B1AQA8 209 aa4.11□□□□□ -1.75
Col9a3-201ENSMUST00000103059 Sprr2fO70557 76 aa4.07□□□□□ -1.76
Col9a3-201ENSMUST00000103059 A030014E15RikA0A1Y7VJV2 120 aa4.06□□□□□ -1.76
Col9a3-201ENSMUST00000103059 Lce3cQ91V05 98 aa4.06□□□□□ -1.76
Col9a3-201ENSMUST00000103059 Krtap4-9B1AQA9 244 aa4.05□□□□□ -1.76
Col9a3-201ENSMUST00000103059 Lce3dE9Q8V1 98 aa4.04□□□□□ -1.76
Col9a3-201ENSMUST00000103059 Sprr2hO70559 108 aa4.03□□□□□ -1.76
Col9a3-201ENSMUST00000103059 Sprr2eO70556 76 aa4.03□□□□□ -1.76
Col9a3-201ENSMUST00000103059 Lce3eF8VQJ0 98 aa4□□□□□ -1.77
Col9a3-201ENSMUST00000103059 Lce3fQ6PAI4 98 aa4□□□□□ -1.77
Col9a3-201ENSMUST00000103059 Lce1bQ9D149 137 aa3.97□□□□□ -1.77
Col9a3-201ENSMUST00000103059 ObscnA2AAJ9 8891 aaKnown RBP3.96□□□□□ -1.77
Col9a3-201ENSMUST00000103059 2300003K06RikA2A4M0 262 aa3.93□□□□□ -1.78
Col9a3-201ENSMUST00000103059 Sprr2kO70562 68 aa3.93□□□□□ -1.78
Col9a3-201ENSMUST00000103059 Krtap4-13Q9D7P3 165 aa3.93□□□□□ -1.78
Col9a3-201ENSMUST00000103059 Lce3aQ497I5 98 aa3.9□□□□□ -1.79
Col9a3-201ENSMUST00000103059 A030003K21RikA0A1Y7VIM3 128 aa3.85□□□□□ -1.79
Col9a3-201ENSMUST00000103059 Lce1kJ3QP15 125 aa3.82□□□□□ -1.8
Col9a3-201ENSMUST00000103059 Lce1lQ9D1G7 135 aa3.82□□□□□ -1.8
Col9a3-201ENSMUST00000103059 Krtap4-16Q91W93 202 aa3.81□□□□□ -1.8
Col9a3-201ENSMUST00000103059 A0A286YCP9 139 aa3.8□□□□□ -1.8
Col9a3-201ENSMUST00000103059 Gm6217A0A1Y7VJK9 128 aa3.77□□□□□ -1.81
Col9a3-201ENSMUST00000103059 Krtap31-2Q8CAY5 177 aa3.76□□□□□ -1.81
Col9a3-201ENSMUST00000103059 Mt1P02802 61 aaKnown RBP3.76□□□□□ -1.81
Col9a3-201ENSMUST00000103059 Krtap20-2E9Q0A8 60 aa3.62□□□□□ -1.83
Col9a3-201ENSMUST00000103059 Gm11568A2A4M2 211 aa3.61□□□□□ -1.83
Col9a3-201ENSMUST00000103059 Krtap9-1Q64526 186 aa3.61□□□□□ -1.83
Col9a3-201ENSMUST00000103059 Macf1Q9QXZ0 7354 aaKnown RBP3.6□□□□□ -1.83
Col9a3-201ENSMUST00000103059 Muc16A0A140LJ72 8478 aa3.49□□□□□ -1.85
Col9a3-201ENSMUST00000103059 Krtap5-2Q9D5Z7 189 aa3.46□□□□□ -1.86
Col9a3-201ENSMUST00000103059 Krtap6-3A0A087WQL6 57 aa3.45□□□□□ -1.86
Col9a3-201ENSMUST00000103059 Gm10024A0A0A0MQA4 119 aa3.36□□□□□ -1.87
Col9a3-201ENSMUST00000103059 Gm10153A0A1B0GRL1 320 aa3.34□□□□□ -1.87
Col9a3-201ENSMUST00000103059 Kmt2dQ6PDK2 5588 aa3.34□□□□□ -1.88
Col9a3-201ENSMUST00000103059 Hmcn1D3YXG0 5634 aa3.34□□□□□ -1.88
Col9a3-201ENSMUST00000103059 Mt3P28184 68 aa3.33□□□□□ -1.88
Col9a3-201ENSMUST00000103059 Gm11554B1AQB2 190 aa3.2□□□□□ -1.9
Col9a3-201ENSMUST00000103059 Gm11559Q9D3H7 191 aa3.17□□□□□ -1.9
Col9a3-201ENSMUST00000103059 Gm4553A0A1B0GSA9 284 aa3.16□□□□□ -1.9
Col9a3-201ENSMUST00000103059 Gm45337A0A1B0GS71 263 aa3.13□□□□□ -1.91
Col9a3-201ENSMUST00000103059 Muc19Q6PZE0 7524 aa3.09□□□□□ -1.91
Col9a3-201ENSMUST00000103059 Gm2431E9Q8S1 172 aa3.09□□□□□ -1.91
Col9a3-201ENSMUST00000103059 Gm40460A0A1B0GR10 244 aa3.02□□□□□ -1.93
Col9a3-201ENSMUST00000103059 Gm7579A0A1B0GRJ4 243 aa3.02□□□□□ -1.93
Col9a3-201ENSMUST00000103059 Krtap5-5Q2TA51 241 aa3.02□□□□□ -1.93
Col9a3-201ENSMUST00000103059 Krtap5-4Q62220 223 aa3.02□□□□□ -1.93
Col9a3-201ENSMUST00000103059 DstQ91ZU6 7393 aaKnown RBP2.96□□□□□ -1.94
Col9a3-201ENSMUST00000103059 1110025L11RikO09048 78 aa2.87□□□□□ -1.95
Col9a3-201ENSMUST00000103059 Krtap6-5Q925H3 78 aa2.87□□□□□ -1.95
Col9a3-201ENSMUST00000103059 Gm11639A0A1D5RLM8 5808 aa2.83□□□□□ -1.96
Col9a3-201ENSMUST00000103059 NebE9Q1W3 7152 aa2.79□□□□□ -1.96
Col9a3-201ENSMUST00000103059 Eppk1Q8R0W0 6548 aa2.78□□□□□ -1.96
Col9a3-201ENSMUST00000103059 Gm39115A0A1B0GSH7 232 aa2.77□□□□□ -1.97
Col9a3-201ENSMUST00000103059 Gm45618A0A1B0GSA0 219 aa2.71□□□□□ -1.98
Col9a3-201ENSMUST00000103059 AhnakE9Q616 5656 aaKnown RBP2.69□□□□□ -1.98
Col9a3-201ENSMUST00000103059 Gm11567Q9D141 195 aa2.65□□□□□ -1.98
Col9a3-201ENSMUST00000103059 Sprr2bO70554 98 aa2.6□□□□□ -1.99
Col9a3-201ENSMUST00000103059 Gm10229O08631 77 aa2.54□□□□□ -2
Col9a3-201ENSMUST00000103059 Gm29735A0A1B0GT06 219 aa2.52□□□□□ -2.01
Col9a3-201ENSMUST00000103059 Gpr98Q8VHN7 6298 aaKnown RBP2.44□□□□□ -2.02
Col9a3-201ENSMUST00000103059 Phgr1Q8K0G7 91 aa2.37□□□□□ -2.03
Col9a3-201ENSMUST00000103059 Krtap21-1Q925H4 128 aa2.35□□□□□ -2.03
Col9a3-201ENSMUST00000103059 Krtap6-2O08884 159 aa2.15□□□□□ -2.07
Col9a3-201ENSMUST00000103059 Krtap5-1Q64507 230 aa1.88□□□□□ -2.11
Col9a3-201ENSMUST00000103059 Gm4559A4IF42 199 aa1.8□□□□□ -2.12
Retrieved 80 of 22,080 RNA–protein pairs in 7.9 ms